CaUC01G017780 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G017780
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description3-ketoacyl-CoA synthase
LocationCiama_Chr01: 31210098 .. 31215695 (-)
RNA-Seq ExpressionCaUC01G017780
SyntenyCaUC01G017780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTATAGAACTCTAGGAATTTACCGAAGAAAATTAAAGTTCCACGAGTAAACATGTCATAGATGAAAAAGGCAGTTCATCTATGGCGTGTTTACTCTTATCCTTGACCTATTAAAAAACAATAATCTTATCCAAGAAGAAGTTCAAATTTTATGGATAGACATCATTAAAAGCAATAGCTTAGGGAATGTGGACAGAAAGGAATCTATATATCTTTGAAGAAAAACAAACTCTTTATGAGTGAGAGATTAGATCTCTCATCAAATATTATATGGCTTTTTTTTTTAAACAAGAAATAAACTTTTCATTGAAATAGTGAAAAGAGAGTATCACTCAAAAGATACAAACTCCGAAAAGGAGAGAAGAATGCATAAAGAAACATAAAAATATCAAAAACAAAATTAAGCTTGAGAAATAGAGGCATTTCCATTAAGGGAAATGGCTTCTTGAGGTGCTCTTTCCACATATTTCAGAAATTGTTTCACTTTTTTAATTAATTCTTACTGGGATACTAGTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGAATACCTTTTTGGTCCCTATGTTTTGAGTAATAGTTGCATTTGGTCCCTAGGTTTTCAAAATGGACCTTTTTCGTCCCTGAACTTTGAGAAATAGGTTTAAAAGGTCCCTTGGTTGTATTTTCCAGAATAATATTTTATTATTTTAGTGGTGAGATGGAAATTATATAATGTAACAAATAATTTATAATAATATACAAAAACAAAAACCCCTCTTTCTCTCACTTCTCTCTCCTCTATCTCACTCTTCTTCTCTCCTTTTCTACTCCCCCCTCTCTCTCCTCCTACTCCCGCACCCTTTCTCGCTTCTGTAACTCATGGTTGTATCCTCCCCTTCTTCCCCTTTTTACTTTCTCTTTACACTTCTCAGCCTTTTTAAATCCCCCCCACCCCCAAAATTCATGGGTTGTTTTCAAATATAGGAAAATGAACCAAAATATTTACAAATATAGCAAAATTTGACTACCTATCCACGATAGACTATTATCTATGTTATGATAGACACAGATAGTAGTCTATCGCGATCTATCACAGTCTATCACAGATAGACTATGATATTTTGCTATTATTTATAAATATTTTCAGCAATTTTGTCATTTAAAATAATTTCCCATAATTCAATTCATTTCCAATCCATTCTTCTTCTTCCTCATCAAGAATGGCAGACCACAAACTCCTTAATTTCCCCTTATTTCCTCCAACGCCATGTACCTTCTTTTACTCCCTTTCCTCGTCGTCGTCTCCACCCATCTCTTCACCCTCCAATTCGAAGACTACCTTTCTGAAACCACTTCAATTTTAATCTCCCCTCTGTTTCACTCTGTTCTTCTTTCACTGTTTTTCTTGCTATCCTTTATGCTATGACCCGACCCAGAGAATTTACCTTCTCAATTTCTCTTGCTACAAGCCTTAACCAGCTAGGACCTACGAAAGTGGGACGTTTCTCCACAAATCGAAGCTCAATGGAGTTTTATAGAGGAGAATTTGGGGTTCCAAAAGAAGATTCTTGAGCGAAAGGGTTTGAGGGAGAAGACTTACTTGCCAGAGGCGGTGATGAGGGTGTCGTCGAATCCTTGTTTGGTGCGATTGATGAGCTTTTGTAGAAGACGGGCATGAAGGCTAAGGACATTTGGGATTTTGGTGGTCAATTGTAGTTTGTTTAATCCTACACTTTCTTTGTCTGCTATGATTGTTAATCATTATAAGCTTAGATGAAAAAAGAAGAAGAGGGGAAAACAGCGTCGACACCGAACAGGGAGGAGTGTCAAAAGAGGAGGTTGGGAGCAATAAGTATCGGGTGTGATGCTAAAGGAGTGAAGGAGGGGTGAGGACAAGATTGAGATAGAGGAGACAGAAGTGAGAGAAAAAGGGGTTTTTTTTTTTTTATACTATTCTTTTATTATTTATTACATTTATAATTTCCATCTCACTATTAAAATAATAAAAATATTACTATGTTACTGCAGCAAACGGAACACTTAACTGAGGGACCTTTTAAATCTATTTCTCAAAACTTAGGGACCAAAAAGGTCCATTTTGAAAACTTAGGGACCAAATGCACCTATTATTGAAAACATAGGAACTAAAAAGGTAATTTTCCCTATTTTTTTTTTTTTACTTTTTGAACTTTTGTTTGGGAGGTTGTTTGGTAGTTTAAAGATCTATTCTTGTTGGGGTGATCTTTTTTAAAATCACAAGACTACCCACCTGACCCTATAACATTTTTAAGATATTAAATCCTAAGTAGGTGCTCACCATGGATTGAAACCATACCCTCTAAGTTCTTTATAAACTCATTATCCTTATTGACCACTATGACAACTCATGATGGTTCTTGTTGGGGTGATCTAAAGACAGTTATTTCTTTTTAATTGTTAGTTTGTAACTATTTAAATATCAATGAAAGATTCTTCTACTTGTTCAATAGAAAAACAACATACTTATCAAACGCATCCACCAGCATGGAATTTCAGAGAACAGACCTCTATAAGAGCATCACGTTTCTTGAGCTCCTCCTCAAGCTTCTTGCTTACTGCAGAAGAATCCATGCTATCTCCAGTGGCCTTGGATGGTTCTGTGCTCAATGACGATCTAACTTCATTCACTTGTGACTCTATGCTTTTAATCTTTGACTACATGGAGAAAAAATTGTACCATTTCCATCAATACAAAAATAATGGACTTACAAATTATTCAGGTCAGGAGTTCTGATATAATTGAGAACCAACCTGCAAAGTCTGAATGGTTGAATCTCTCTGTTGTATCTGCAGTTTCTGCTCTTGCTCCAAATGCAAGAGTTGAGCCACTTGATTTTTAAGCTGAGCATTTTGTTCCTTTTCTGTCTTAAGTTTTTCTGCAAGTGAAATGTTCTCCATCTGCATCATATAGAACACAACTCAGCGACTTTGCTGCTGGAAGAAGTGATATGACAAAACTAATATCAACGTGTGAACAGAAAATGACAATTATTTTGAAATTAAAGCAATAATGCTGCGTTGAAGAAAAGCTTAATAGAAAAACGAGACATCAAAATAGTCATCAGTAAAAAAAACAGGATATACTTAGTTTCATAAAATGTCAATCATGCCCTTATGACAGGAAAAAAGGAACTTAAACAGAAGACAGGGTTCAAGCAAAAGAAAAGGGCTTCAGCCTGATGAACAAATGTATACACCTCACTTCAGAAAAATATATGAGTAACTATTGCATTAATCTTTTGAAGTCAAGCATTGTTCAAATTGTTAAATAGACAGCATTTGTTTTTTGGACTATAACAGCAGGCTGACCGTCCATTGATATAAATGAACTAAAATAATAATCCAATTTTCTTTTACTTCCAATGGGATCTATAACAGAATTGGGGAAATTGTTGATTTGTGCTTCCTCGGAAAGACATTATTTTTATGAGACGCGACCAGACTGAAAATAGAGAAGATTTGTGTTTATAGATCCCAAAACCTAAGTTAACTCCAATCATGCATTCATCCTAAACCTGACATTTCATAGCTTACATGTAAAAAGCAAGGTGGAAAAATGTGAAACCCAAAATGAGACTACGTTGAATGATATAACTGTGTAACAAAAAACATAATTTAAGAACCTTCAAATCTGATTGCAGAGTGGAAGAAACTTTCCACGCCTTCTGAACTTCATTGAAGAGTAAAACACACTGGTCATTAGCATCTTTAAGTGCATTTTTCAGTCCCAGAACCTCTTGTTTCAGATCCTGAATTTCTTTTTCCTTGTCATATAATTCCTTACGTGCATCATTTGCCTATAAGAATTGGCAGGGCATGAAATTGTGAATAAAACAGATATATTCTTAAAATACTTCCATTTAAAGCCCACAACTGCCCACCACCCCCAATGATGCATGTTACATCATGTACCTTATTGTACTATTGACGTAAATATATTTTTCTTTTTCCCTTTTTAATAGATACCAAGTTTTCATTAGAATAAGTGGAAGAATACAAAAGGGACTTACAAAAACACTCCAATGAAAAGAAGCAATTAGATCCTAATATCTCGGTTATAGGAGCCCATTAGCAACTTGTCATTGATTATAAATGCATGTTCTATAAGATAAGGACTCCCATATTTGTCTATATCGATGACTGTAATGAACGGTATAGTGATGAAATATTCTTTACGTATGCATCCTCACAGGCTTGCAACCTATTACTGCTCAGCCAATCAAAAAATAAGAGATCCCCTCAGTGATATTTAGAAGCACTATTTAAGACTTCACATCAGCTCCTGAGCCTGGACCAAATATAAACATGAGTTACTTTCCTATCTTAGATCCTATTTTCACTCCGTTTAAGTTATAACTTCCTCTTCAGTTAGAAATTCTCTCACAGAAGGCTCTAAGTTTAAAAATCAAGATTTGAATTACCACGGCAGGCCAAGCCCATTCCACAAAACTTGGTTCCTCAAAATAAGAGGCACCCCTTTAAGTTCAACAATACCTCGTCCATTAAAACACTAGGAGATGACAGTACTGAATATCATCTAAAAATGTGGCCACATTCAATAAAATATATTCGTACTTACAATATCTCTCCATTTTTTAATTGTATCTCGATTTCCAAGACTTAATACAGCATTCCGTGCTCTTGCGGAGAAGTTTAATGATGATAGCGTCTCTGACAGATTTGAAGCATTGGGGCAGAGGTGGACAATCATCAAAGTTTTCGAATTCCCGCCTGCATTAATTGAACCCGTTAAGCAAAAGGAACCAGGTCTACCTCATTCCAGCAGCCTTCGGATAACGATATAA

mRNA sequence

ATGGAAGACCTACGAAAGTGGGACGTTTCTCCACAAATCGAAGCTCAATGGAGTTTTATAGAGGAGAATTTGGGGTTCCAAAAGAAGATTCTTGAGCGAAAGGGTTTGAGGGAGAAGACTTACTTGCCAGAGGCGGTGATGAGGGTGTCGTCGAATCCTTGTTTGATGAAAAAAGAAGAAGAGGGGAAAACAGCGTCGACACCGAACAGGGAGGAGTGTCAAAAGAGGAGGTTGGGAGCAATAAAAAAACAACATACTTATCAAACGCATCCACCAGCATGGAATTTCAGAGAACAGACCTCTATAAGAGCATCACGTTTCTTGAGCTCCTCCTCAAGCTTCTTGCTTACTGCAGAAGAATCCATGCTATCTCCAGTGGCCTTGGATGGTTCTGTGCTCAATGACGATCTAACTTCATTCACTTGTGACTCTATGCTTTTAATCTTTGACTACATGGAGAAAAAATTGTACCATTTCCATCAATACAAAAATAATGGACTTACAAATTATTCAGTTTTTCTGCAAGTGAAATGTTCTCCATCTGCATCATATAGAACACAACTCAGCGACTTTGCTGCTGGAAGAAGTGATATGACAAAACTAATATCAACACTTAATACAGCATTCCGTGCTCTTGCGGAGAAGTTTAATGATGATAGCGTCTCTGACAGATTTGAAGCATTGGGGCAGAGGTGGACAATCATCAAAGTTTTCGAATTCCCGCCTGCATTAATTGAACCCGTTAAGCAAAAGGAACCAGGTCTACCTCATTCCAGCAGCCTTCGGATAACGATATAA

Coding sequence (CDS)

ATGGAAGACCTACGAAAGTGGGACGTTTCTCCACAAATCGAAGCTCAATGGAGTTTTATAGAGGAGAATTTGGGGTTCCAAAAGAAGATTCTTGAGCGAAAGGGTTTGAGGGAGAAGACTTACTTGCCAGAGGCGGTGATGAGGGTGTCGTCGAATCCTTGTTTGATGAAAAAAGAAGAAGAGGGGAAAACAGCGTCGACACCGAACAGGGAGGAGTGTCAAAAGAGGAGGTTGGGAGCAATAAAAAAACAACATACTTATCAAACGCATCCACCAGCATGGAATTTCAGAGAACAGACCTCTATAAGAGCATCACGTTTCTTGAGCTCCTCCTCAAGCTTCTTGCTTACTGCAGAAGAATCCATGCTATCTCCAGTGGCCTTGGATGGTTCTGTGCTCAATGACGATCTAACTTCATTCACTTGTGACTCTATGCTTTTAATCTTTGACTACATGGAGAAAAAATTGTACCATTTCCATCAATACAAAAATAATGGACTTACAAATTATTCAGTTTTTCTGCAAGTGAAATGTTCTCCATCTGCATCATATAGAACACAACTCAGCGACTTTGCTGCTGGAAGAAGTGATATGACAAAACTAATATCAACACTTAATACAGCATTCCGTGCTCTTGCGGAGAAGTTTAATGATGATAGCGTCTCTGACAGATTTGAAGCATTGGGGCAGAGGTGGACAATCATCAAAGTTTTCGAATTCCCGCCTGCATTAATTGAACCCGTTAAGCAAAAGGAACCAGGTCTACCTCATTCCAGCAGCCTTCGGATAACGATATAA

Protein sequence

MEDLRKWDVSPQIEAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKTASTPNREECQKRRLGAIKKQHTYQTHPPAWNFREQTSIRASRFLSSSSSFLLTAEESMLSPVALDGSVLNDDLTSFTCDSMLLIFDYMEKKLYHFHQYKNNGLTNYSVFLQVKCSPSASYRTQLSDFAAGRSDMTKLISTLNTAFRALAEKFNDDSVSDRFEALGQRWTIIKVFEFPPALIEPVKQKEPGLPHSSSLRITI
Homology
[Close]
BLAST of CaUC01G017780 vs. NCBI nr
Match: KAA0049314.1 (3-ketoacyl-CoA synthase 20-like [Cucumis melo var. makuwa] >TYK17244.1 3-ketoacyl-CoA synthase 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 86  ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMAEARKEAE 135

[Close]
BLAST of CaUC01G017780 vs. NCBI nr
Match: XP_008438597.1 (PREDICTED: 3-ketoacyl-CoA synthase 20-like [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMAEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. NCBI nr
Match: XP_022979387.1 (3-ketoacyl-CoA synthase 11-like [Cucurbita maxima])

HSP 1 Score: 68.9 bits (167), Expect = 7.3e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMEEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. NCBI nr
Match: XP_038900907.1 (LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 20 [Benincasa hispida])

HSP 1 Score: 68.9 bits (167), Expect = 7.3e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 18  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 119 SFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMAEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. NCBI nr
Match: XP_022924722.1 (3-ketoacyl-CoA synthase 11-like [Cucurbita moschata] >KAG7018756.1 3-ketoacyl-CoA synthase 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.9 bits (167), Expect = 7.3e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMEEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. ExPASy Swiss-Prot
Match: O48780 (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana OX=3702 GN=KCS11 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 18  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           SF EENL FQ+KIL+R GL E TYLPEAV+ V  NPC+ +  +E +T
Sbjct: 130 SFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAET 176

[Close]
BLAST of CaUC01G017780 vs. ExPASy Swiss-Prot
Match: Q5XEP9 (3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana OX=3702 GN=KCS2 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 7.6e-08
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Sbjct: 136 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAET 181

[Close]
BLAST of CaUC01G017780 vs. ExPASy Swiss-Prot
Match: Q9FG87 (3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana OX=3702 GN=KCS20 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.9e-08
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Sbjct: 142 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEAET 187

[Close]
BLAST of CaUC01G017780 vs. ExPASy Swiss-Prot
Match: Q9SIX1 (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana OX=3702 GN=KCS9 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.1e-04
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           F E +L FQ+KILER GL E+TYLPEA+  +   P +M   EE +
Sbjct: 139 FNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMAAREESE 183

[Close]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match: A0A5D3D1Z6 (3-ketoacyl-CoA synthase 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00950 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 86  ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMAEARKEAE 135

[Close]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match: A0A1S3AWF2 (3-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103483657 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMAEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match: A0A6J1INL8 (3-ketoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC111479128 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMEEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match: A0A6J1E9S5 (3-ketoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111432137 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 14  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Sbjct: 115 ELTGSFTEENLGFQKKILERSGLGEKTYLPEAVMRVPPNPCMEEARKEAE 164

[Close]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match: A0A2C9UCE8 (3-ketoacyl-CoA synthase OS=Manihot esculenta OX=3983 GN=MANES_15G035000 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-08
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0 

Query: 18  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           SF EENLGFQKKILER GL +KTYLPEAV+RV  NPC+ +  +E +T
Sbjct: 140 SFTEENLGFQKKILERSGLGQKTYLPEAVLRVPPNPCMAEARKEAET 186

[Close]
BLAST of CaUC01G017780 vs. TAIR 10
Match: AT2G26640.1 (3-ketoacyl-CoA synthase 11 )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 18  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           SF EENL FQ+KIL+R GL E TYLPEAV+ V  NPC+ +  +E +T
Sbjct: 130 SFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAET 176

[Close]
BLAST of CaUC01G017780 vs. TAIR 10
Match: AT1G04220.1 (3-ketoacyl-CoA synthase 2 )

HSP 1 Score: 59.3 bits (142), Expect = 5.4e-09
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Sbjct: 136 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAET 181

[Close]
BLAST of CaUC01G017780 vs. TAIR 10
Match: AT5G43760.1 (3-ketoacyl-CoA synthase 20 )

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT 65
           F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Sbjct: 142 FTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEAET 187

[Close]
BLAST of CaUC01G017780 vs. TAIR 10
Match: AT2G16280.1 (3-ketoacyl-CoA synthase 9 )

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 19  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK 64
           F E +L FQ+KILER GL E+TYLPEA+  +   P +M   EE +
Sbjct: 139 FNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMAAREESE 183

The following BLAST results are available for this feature:
BLAST of CaUC01G017780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049314.15.6e-0868.003-ketoacyl-CoA synthase 20-like [Cucumis melo var. makuwa] >TYK17244.1 3-ketoacy... [more]
XP_008438597.15.6e-0868.00PREDICTED: 3-ketoacyl-CoA synthase 20-like [Cucumis melo][more]
XP_022979387.17.3e-0868.003-ketoacyl-CoA synthase 11-like [Cucurbita maxima][more]
XP_038900907.17.3e-0871.74LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 20 [Benincasa hispida][more]
XP_022924722.17.3e-0868.003-ketoacyl-CoA synthase 11-like [Cucurbita moschata] >KAG7018756.1 3-ketoacyl-Co... [more]
BLAST of CaUC01G017780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O487803.4e-0859.573-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana OX=3702 GN=KCS11 PE=1 SV=1[more]
Q5XEP97.6e-0856.523-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana OX=3702 GN=KCS2 PE=2 SV=2[more]
Q9FG879.9e-0856.523-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana OX=3702 GN=KCS20 PE=2 SV=1[more]
Q9SIX15.1e-0451.113-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana OX=3702 GN=KCS9 PE=2 SV=1[more]
BLAST of CaUC01G017780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1Z62.7e-0868.003-ketoacyl-CoA synthase 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3AWF22.7e-0868.003-ketoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103483657 PE=3 SV=1[more]
A0A6J1INL83.5e-0868.003-ketoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC111479128 PE=3 SV=1[more]
A0A6J1E9S53.5e-0868.003-ketoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111432137 PE=3 SV=1[more]
A0A2C9UCE84.6e-0868.093-ketoacyl-CoA synthase OS=Manihot esculenta OX=3983 GN=MANES_15G035000 PE=3 SV=... [more]
BLAST of CaUC01G017780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G26640.12.4e-0959.573-ketoacyl-CoA synthase 11 [more]
AT1G04220.15.4e-0956.523-ketoacyl-CoA synthase 2 [more]
AT5G43760.17.0e-0956.523-ketoacyl-CoA synthase 20 [more]
AT2G16280.13.6e-0551.113-ketoacyl-CoA synthase 9 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013601FAE1/Type III polyketide synthase-like proteinPFAMPF08392FAE1_CUT1_RppAcoord: 15..63
e-value: 1.1E-5
score: 24.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G017780.1CaUC01G017780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity
molecular_function GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups