CaUC01G017090 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCCAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGA ATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCCAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGA ATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCCAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGA METIKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPTNLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY Homology
BLAST of CaUC01G017090 vs. NCBI nr
Match: KAA0036403.1 (uncharacterized protein E6C27_scaffold18G002050 [Cucumis melo var. makuwa] >TYK12799.1 uncharacterized protein E5676_scaffold255G003890 [Cucumis melo var. makuwa]) HSP 1 Score: 254.2 bits (648), Expect = 7.7e-64 Identity = 138/168 (82.14%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of CaUC01G017090 vs. NCBI nr
Match: KGN48992.2 (hypothetical protein Csa_003129 [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 5.5e-62 Identity = 135/164 (82.32%), Postives = 144/164 (87.80%), Query Frame = 0
BLAST of CaUC01G017090 vs. NCBI nr
Match: XP_022132695.1 (uncharacterized protein LOC111005494 [Momordica charantia]) HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61 Identity = 125/160 (78.12%), Postives = 144/160 (90.00%), Query Frame = 0
BLAST of CaUC01G017090 vs. NCBI nr
Match: XP_023543992.1 (uncharacterized protein LOC111803699 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.6 bits (584), Expect = 2.0e-56 Identity = 126/166 (75.90%), Postives = 140/166 (84.34%), Query Frame = 0
BLAST of CaUC01G017090 vs. NCBI nr
Match: XP_022978000.1 (uncharacterized protein LOC111478121 [Cucurbita maxima]) HSP 1 Score: 228.0 bits (580), Expect = 5.9e-56 Identity = 126/166 (75.90%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of CaUC01G017090 vs. ExPASy TrEMBL
Match: A0A5A7T0J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003890 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.7e-64 Identity = 138/168 (82.14%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of CaUC01G017090 vs. ExPASy TrEMBL
Match: A0A0A0KLJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495800 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63 Identity = 136/166 (81.93%), Postives = 145/166 (87.35%), Query Frame = 0
BLAST of CaUC01G017090 vs. ExPASy TrEMBL
Match: A0A6J1BT69 (uncharacterized protein LOC111005494 OS=Momordica charantia OX=3673 GN=LOC111005494 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.9e-62 Identity = 125/160 (78.12%), Postives = 144/160 (90.00%), Query Frame = 0
BLAST of CaUC01G017090 vs. ExPASy TrEMBL
Match: A0A6J1INU9 (uncharacterized protein LOC111478121 OS=Cucurbita maxima OX=3661 GN=LOC111478121 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56 Identity = 126/166 (75.90%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of CaUC01G017090 vs. ExPASy TrEMBL
Match: A0A6J1GGE2 (uncharacterized protein LOC111453674 OS=Cucurbita moschata OX=3662 GN=LOC111453674 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.9e-56 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of CaUC01G017090 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13 Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of CaUC01G017090 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12 Identity = 59/177 (33.33%), Postives = 86/177 (48.59%), Query Frame = 0
BLAST of CaUC01G017090 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05 Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of CaUC01G017090 vs. TAIR 10
Match: AT3G49820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 5.0e-05 Identity = 43/143 (30.07%), Postives = 65/143 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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