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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTACAAGTCAAATTTTAATATGGTATTTGAATTATGAATATCGTGTTCAAATGTTTTTCATCACTTATAACATTTTAATTGCTACAATTATACACTCTATGCAATACTTTTCTTGTAAGTTATTACCATTATAAGAGTTTAGATTTTTTATTAAAATAATTATTAGTTAATAAATTTGATAAATGCAATTTTCAAAGTTTAAGAGTAATATTTTAAATAAAAAAACTAAGTTTAAATCAGATGAATAATGATTATGCATCTAAAAAAATAAAGTAAGAGTTGCATATATCACTTAGGTCTAATGAATTAGTAAATATAAAAAATTTTACAGAAATTTAGATTTAGTTTCAGAGTCTATTAGCAATAAAGTTTATTATTAATAAATTTTGTTATATTTATAATTTTTAAAAAATATTGATACACGGGTAATTATTAGTTTTAAAATTGCATATTCAAATTAAAGCTGGAATAAGTTTAATGAATTTAATCCTGAACACAAACATGTTAATTAACTAATTACGGAAAAAGCAGAAATTAAGCGAAATAAAAATGGAAGACAGAAAGGAAGAAAGGTTGATGCAATCAAATTGTGCGGTTCCGTTGCGAGGAGGAATTGAAGTTGCGCCAACCAATTTCGTAGAAGCCAAATCGCATCTTCGCATCTCGCCAACGAATCTTTCTCATTTTCTTCCTTGCATTGCATCATATAACTTCCTTTTCGTTAACATCTAAGCTTTCTCTCATCGTGGGGGTCTCAAACATTGCCAATTCATCCACCGGACTCTGCCCCCTTCGTAATTCAGTGCTTAAATTTCTCTGTTTTCCCTTCTTTAATGCTTTCTTTTGTTTTCTAACTTCATTTTCCGCTTTTCTTCTCCTCCTTCTTGCAGGATTCTGTCCGCTAACTTTCTCTTTTTTTTTCCCTTTCTGCTGCTGGAGGGGACGAGGGCTTGCTTCTAACCCTCTCTATTCTTCTGGCCTTCTTCCAATTTTAGGTATTTCTTTTTTCTTTCCTTCTTCTAGGGCTTTCTTCTCTTCTTTAATTCTCCGAGTTCTGGACATGTTTTTCGCTTCTAATTTTACCTCTGCGTGTGTCTTTGGAAAAAAGGGAAACGATAATGGTTTATGATCTTGTTTGAGACAATTTTCAATTGTTTCTTATTCTGAATTGATTGGCTTAAGGAAGAACATTGGTCGGTTATAGTTCATAGCGTGTTGTTCATTTGGTTGAGTAGGGAATGGATACATACGAGGAAATGACTGA mRNA sequence ATGTACAAGTCAAATTTTAATATGAAGCCAAATCGCATCTTCGCATCTCGCCAACGAATCTTTCTCATTTTCTTCCTTGCATTGCATCATATAACTTCCTTTTCGTTAACATCTAAGCTTTCTCTCATCGTGGGGGTCTCAAACATTGCCAATTCATCCACCGGACTCTGCCCCCTTCGATTCTGTCCGCTAACTTTCTCTTTTTTTTTCCCTTTCTGCTGCTGGAGGGGACGAGGGCTTGCTTCTAACCCTCTCTATTCTTCTGGCCTTCTTCCAATTTTAGGGAATGGATACATACGAGGAAATGACTGA Coding sequence (CDS) ATGTACAAGTCAAATTTTAATATGAAGCCAAATCGCATCTTCGCATCTCGCCAACGAATCTTTCTCATTTTCTTCCTTGCATTGCATCATATAACTTCCTTTTCGTTAACATCTAAGCTTTCTCTCATCGTGGGGGTCTCAAACATTGCCAATTCATCCACCGGACTCTGCCCCCTTCGATTCTGTCCGCTAACTTTCTCTTTTTTTTTCCCTTTCTGCTGCTGGAGGGGACGAGGGCTTGCTTCTAACCCTCTCTATTCTTCTGGCCTTCTTCCAATTTTAGGGAATGGATACATACGAGGAAATGACTGA Protein sequence MYKSNFNMKPNRIFASRQRIFLIFFLALHHITSFSLTSKLSLIVGVSNIANSSTGLCPLRFCPLTFSFFFPFCCWRGRGLASNPLYSSGLLPILGNGYIRGND
Homology
BLAST of CaUC01G017040 vs. NCBI nr
Match: KAG6594968.1 (hypothetical protein SDJN03_11521, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 28 LHHITSFSLTSKLSLIVGVSNIANSSTGLCPLRFCPL-----TFSFFFPFCCWRGRGL-A 87
L HI SFSL KLSL+VGVSNI + + P F L +F FFP CCWRG G +
Sbjct: 33 LRHINSFSLNLKLSLLVGVSNITSENHLRDPSPFVILWILSGSFHLFFPCCCWRGPGFTS 92
Query: 88 SNPLYSSGLLPILGNGYI 100
S LYS+ LLPIL +G +
Sbjct: 93 SGHLYSAALLPILRDGCV 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG6594968.1 | 1.4e-07 | 51.28 | hypothetical protein SDJN03_11521, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
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Relationships
The following mRNA feature(s) are a part of this gene:
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