CaUC01G014820 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G014820
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr01: 27886608 .. 27888644 (-)
RNA-Seq Expression	CaUC01G014820
Synteny	CaUC01G014820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGAACAAAGCTCTGCTTTTATCAAACAGAAGCTAAGTTCAGATCAATCTAGATCACATCAAACAGAAGCTAAGTTCAGCAACTGTTCTCCATCTACCACAGTTTGACCAGCTTTTCACATTGTAATGGAGACCCCTGGATAAGGATTGGTGGAATATTATCTCTAGAAAGACGATATCCTATTGAATATTGCAGTGCGAAACCCAGTGAAGCATGCCAAAAAGTTGAATAACCAATAAACAGTGCTTAGTAGTGCTTTGAAATGCTGGGTGGCATTCTTTTCATGGCTGGATATTTTACTTCTAAGCAATTATTAGAGGTTAAGATATTTGAATTCTCGAAACAATACTAACGGATGCAGCTAAGATGCCTTTCATTGATCTAAAGATTTGGTTCTCCATTAAGACATTTTGCTGAAGAGTTTCACGAAGTTGCAAACCCTAGTTCGTTTTTGTGATTTATCAGATTGAAGAGCCTTTCTTTGATCCCTCCTTCAGGAAAGTGGTCCCTTTCCTTTTGTCCTTGGGTTGTTTAGTTGACTGTTCACCCTCTTGGCTGTACCCATGAATTAACTAGTAATCAGTCTTTAACAACGAAATCTACCTATAAAGTAACAATATTTAATTATGTAAATTAGTTGGGTAGCTGACCCTCTTGGTTGTTCAGTTTCCTATTAATAATATTAATACTAATGATAAAATAAAAATAAAGAGTTGCAAATGCATTGAGTAATGTCAGGTTGTCAAGTAAAAAGATCATTCTCAATGTCTTCGCGAAGCAATATTTATTATTGTTGATAGGTATAGCGAAAAACGGCACCCTTCATCTGTTGCATGACAGGTGATGCTGCTCGAGGCTATTATCTATTCTGGAAATTACTGTGAAAAGAATCTTGGGCGAAATTGAAGCTTAGCACTACTTAGTGTGAATCGATGGCCTAACAGGGGTTACAAAATCATAGGAAATTCATTGAGATGTTTGAACTCACCTTAACCTGGCAGTAGGATCTAGCATTACTCTGAAATAGGAGATATGCTGAAGCACTTAGACTGACTGGAATTTTATACACCTTAATCAGCTGATGTATTAAAAGTACAGTGTAAAATTCATTATAGGGTCATACAGAACTTGACTGAAACAAATGGAACTTGTGCAGTTTGTTAATTTTTAATAGGGAAAAAAATACTTGAAAAGGATGACCTTGGTATGGTTCATCATTTTCTGCTGGTACTTCAAACAAACCAAAGAAAATAAACAGTCTACTGTAGAAAACTGAAGAGTTGTCGAATACGTATGCCGATTACCCTATATTGTAATTAGCAAAATGGACTTCCCCTATTTATTATTTCAGTTATTCAGTTGACATGTGAACACCTTGTGTAGCAACATCGCGGTTCGGGTCATGACTGTTAGGGACATTAGTCTGCACCCTGGATGCTTATAAACATACCTCTTATAACCTCTCCGGTCTTGTTGTAATTGACTCAGAAAACTTCCAGTCGCATTATCTCGGTTGCACCAAGACCTTCGAAGATGGCAATCAAATGGTTGCAAAATGAAAGATTTCAAACTTTTATGAGAGCTCTCTTAGGCTTTGTTTAAGATGCTTGTGAAAGCCATAGATATCTATAGCTTTCATGGTCCTTTCTCTTTTTGTTGTGTATTCATTCTAGGTGAAGTATTTGGTTCAGTCTCTCAAGTGTTTTGTTGCTGATCTTTACAAATTAGAATAATCTATCTTCTTCCTCTTTGGTTTAGTCAGACTAATTTGTTCCGTCTAATACGTTTCCTCAACATCTCTTGTTTCCTTGACAGGCGTATGTGGACCGAGTTCAGAAGACAACTTGAGAAGACGAAGTTGTCGAAGTACATTCCTATGTATTTTTTTTTTCTTTTCAAAATCATCCCATGTACTAATTTGTTAGAATGCTGCAGCCTTTGGAATGATGATTGTCATGTGTTACTAATGTAGTGTAATGTATCTCCCATTAGCAGTCTTAGGTACATCTCTCTTCAGCCTTTCTGCAAATTAG

mRNA sequence

ATGTTCGAACAAAGCTCTGCTTTTATCAAACAGAAGCTAAGTTCAGATCAATCTAGATCACATCAAACAGAAGCTAAGTTCAGCAACTGTTCTCCATCTACCACAAAAGACGATATCCTATTGAATATTGCAGTGCGAAACCCAGTGAAGCATGCCAAAAAGCGTATGTGGACCGAGTTCAGAAGACAACTTGAGAAGACGAAGTTGTCGAAGTACATTCCTATTGTAATGTATCTCCCATTAGCAGTCTTAGGTACATCTCTCTTCAGCCTTTCTGCAAATTAG

Coding sequence (CDS)

ATGTTCGAACAAAGCTCTGCTTTTATCAAACAGAAGCTAAGTTCAGATCAATCTAGATCACATCAAACAGAAGCTAAGTTCAGCAACTGTTCTCCATCTACCACAAAAGACGATATCCTATTGAATATTGCAGTGCGAAACCCAGTGAAGCATGCCAAAAAGCGTATGTGGACCGAGTTCAGAAGACAACTTGAGAAGACGAAGTTGTCGAAGTACATTCCTATTGTAATGTATCTCCCATTAGCAGTCTTAGGTACATCTCTCTTCAGCCTTTCTGCAAATTAG

Protein sequence

MFEQSSAFIKQKLSSDQSRSHQTEAKFSNCSPSTTKDDILLNIAVRNPVKHAKKRMWTEFRRQLEKTKLSKYIPIVMYLPLAVLGTSLFSLSAN

Homology

The following BLAST results are available for this feature:

BLAST of CaUC01G014820 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G014820 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G014820 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC01G014820 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G014820.1	CaUC01G014820.1	mRNA