CaUC01G014450 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G014450
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr01: 27481003 .. 27481518 (+)
RNA-Seq Expression	CaUC01G014450
Synteny	CaUC01G014450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGTCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

mRNA sequence

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGTCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Coding sequence (CDS)

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGTCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Protein sequence

MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD

Homology

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BLAST of CaUC01G014450 vs. NCBI nr
Match: XP_008462625.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa] >TYK07452.1 RING-H2 finger protein ATL70-like [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of CaUC01G014450 vs. NCBI nr
Match: XP_004143342.1 (RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein Csa_003973 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRT-AN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of CaUC01G014450 vs. NCBI nr
Match: XP_038883587.1 (RING-H2 finger protein ATL70-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 159/171 (92.98%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANR 60
           MNN+TADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRN LSS+    +ANR
Sbjct: 1   MNNSTADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNSLSST----SANR 60

Query: 61  SSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLR 120
           S PQ EE+LEAV+VEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLR
Sbjct: 61  SPPQTEEQLEAVIVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLR 120

Query: 121 LLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 LLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 167

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BLAST of CaUC01G014450 vs. NCBI nr
Match: XP_023544988.1 (RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 9.6e-78
Identity = 153/172 (88.95%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  AVVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of CaUC01G014450 vs. NCBI nr
Match: XP_022977896.1 (RING-H2 finger protein ATL70-like [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV++R  N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  AVVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-51
Identity = 105/164 (64.02%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 7   DSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAE 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSSS  Q   N+ S +  
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQ--TNQDSTRIH 110

Query: 67  EELEAVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPD 126
                V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPD
Sbjct: 111 HHHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPD 170

Query: 127 CGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           C HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

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BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-45
Identity = 100/183 (54.64%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 8   SGGFLSSSN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

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BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-30
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG-LSSSVIQRTANRS-----------SPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

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BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRN---GLSSSVIQRTANRSSPQAEEELEAVVVE 78
           G GYGI +++ +L+LI+ I+LASY C R+   G   +      +  SP AE       V+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-------VK 71

Query: 79  IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVD 138
           +GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CVD
Sbjct: 72  LGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVD 131

Query: 139 PWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
            WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 EWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

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BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.5e-25
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG---LSSSVIQRTANRSSPQ----------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S+S     AN S              
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  -AEEELEA-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
             +++LE+  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

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BLAST of CaUC01G014450 vs. ExPASy TrEMBL
Match: A0A5A7SKL1 (RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001830 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of CaUC01G014450 vs. ExPASy TrEMBL
Match: A0A1S3CHE9 (RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of CaUC01G014450 vs. ExPASy TrEMBL
Match: A0A0A0KIW7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRT-AN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of CaUC01G014450 vs. ExPASy TrEMBL
Match: A0A6J1IL86 (RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.1e-78
Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV++R  N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  AVVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of CaUC01G014450 vs. ExPASy TrEMBL
Match: A0A6J1EJP9 (RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  A VV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAAVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of CaUC01G014450 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 2.5e-52
Identity = 105/164 (64.02%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 7   DSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAE 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSSS  Q   N+ S +  
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQ--TNQDSTRIH 110

Query: 67  EELEAVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPD 126
                V++++  GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPD
Sbjct: 111 HHHHHVIIDVVPGLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPD 170

Query: 127 CGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           C HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of CaUC01G014450 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 100/183 (54.64%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 8   SGGFLSSSN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]

BLAST of CaUC01G014450 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 76/175 (43.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG-LSSSVIQRTANRS-----------SPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]

BLAST of CaUC01G014450 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRN---GLSSSVIQRTANRSSPQAEEELEAVVVE 78
           G GYGI +++ +L+LI+ I+LASY C R+   G   +      +  SP AE       V+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-------VK 71

Query: 79  IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVD 138
           +GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH  CVD
Sbjct: 72  LGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVD 131

Query: 139 PWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
            WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 EWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of CaUC01G014450 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 5.3e-26
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG---LSSSVIQRTANRSSPQ----------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S+S     AN S              
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  -AEEELEA-VVVEIGLDQETITSYPKLLYSE--------AKLQKNDSTASCCSICLADYK 138
             +++LE+  VV  GLD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

The following BLAST results are available for this feature:

BLAST of CaUC01G014450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462625.1	2.9e-82	93.60	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo] >KAA0025213.1 RING-H...	[more]
XP_004143342.1	3.8e-82	92.44	RING-H2 finger protein ATL70 [Cucumis sativus] >KGN48327.1 hypothetical protein ...	[more]
XP_038883587.1	8.4e-82	92.98	RING-H2 finger protein ATL70-like [Benincasa hispida]	[more]
XP_023544988.1	9.6e-78	88.95	RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977896.1	1.3e-77	88.95	RING-H2 finger protein ATL70-like [Cucurbita maxima]	[more]

BLAST of CaUC01G014450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX29	3.6e-51	64.02	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	2.2e-45	54.64	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
O82353	2.0e-30	43.43	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9FL42	1.8e-26	41.45	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9M313	7.5e-25	38.98	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1	[more]

BLAST of CaUC01G014450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKL1	1.4e-82	93.60	RING-H2 finger protein ATL70-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CHE9	1.4e-82	93.60	RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 S...	[more]
A0A0A0KIW7	1.8e-82	92.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 P...	[more]
A0A6J1IL86	6.1e-78	88.95	RING-H2 finger protein ATL70-like OS=Cucurbita maxima OX=3661 GN=LOC111478050 PE...	[more]
A0A6J1EJP9	1.4e-77	88.37	RING-H2 finger protein ATL70-like OS=Cucurbita moschata OX=3662 GN=LOC111433226 ...	[more]

BLAST of CaUC01G014450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35910.1	2.5e-52	64.02	RING/U-box superfamily protein	[more]
AT5G06490.1	1.6e-46	54.64	RING/U-box superfamily protein	[more]
AT2G46160.1	1.4e-31	43.43	RING/U-box superfamily protein	[more]
AT5G07040.1	1.3e-27	41.45	RING/U-box superfamily protein	[more]
AT3G61550.1	5.3e-26	38.98	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 106..147 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 106..148 e-value: 1.5E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 106..148 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 53..152 e-value: 1.9E-22 score: 80.7
None	No IPR available	PANTHER	PTHR46719	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 4..169
None	No IPR available	PANTHER	PTHR46719:SF2	RING-H2 FINGER PROTEIN ATL70-LIKE	coord: 4..169
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 105..148 e-value: 7.53806E-20 score: 75.8013
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 82..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G014450.1	CaUC01G014450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane