CaUC01G014000 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G014000
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 26951135 .. 26952016 (-)
RNA-Seq ExpressionCaUC01G014000
SyntenyCaUC01G014000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCACGAGAGTGCCCAAAGTCTGTGGAGTGCCATTCAGGAGCGGTTCGGAATACAATCTCGAGTCGAGAAGATTACCTTTGTCAGGTATTTCAGTTCACTCGAAAGGGCTTAATGAAAATGAATGATTATTTACGAGTTATGAAAAATCATGCCGACAATCTGGAATTGGCTGGAAGCCCTATTCCTCAACATTCATTGGTATCTCAAGTCCTAATCGGACTAGATGGAGAGTATAATCCCATCGTAGCCACGATCTAAGGACGAGCAAGTGTAAAATGGTCCGACCTTCGGTCAGAGTTGCTAAGCTTTGAAAAACGCCTTGATCTGTAAAACACGAGTAAGTCTGTATCTCTTGGGAACTCATCCTCCGTAAATCTCACAACAAGCAATGGGCCTAACACTGAAGTCGACAAACAGTAGCAAAATGCTGCAAATACTTGTTCTTCTCATCAGAATGGTGGACAAAGAGGAAACAGTTGTGGACAAAGGGGAAGAGGATGCTGGAATGGTGGTAATAGTCGACCCACTTGTCAAATTTGTTTCAAACAAGGACACACGACTCTGACTTGCTTTAAGTTGTTTAACAAAGGGTTTTCTCCTAATCATAACAATGCCCAACCTAATCGGGTTCCAAACAATGGTCCAAATGGGCAAGGCTAATCAAGCTTTTATTGCAACTCAAAGTAACAATTCGTTTGTAGCTACACTAGAATCAGTTGTTGATCCTAGATGGTATATGGATAGTGGAGCTTCAAATCACGTCGTAGGGGATCCAAACAACTTTAGTCACTCTTCTGAACACATGAAGGCACTGAAAAGGTTACTGTTGGTAATGGTTGTGCTTTATCTATTTCTCATATTGGCTCATGTTCTCTAG

mRNA sequence

ATGGGGCACGAGAGTGCCCAAAGTCTGTGGAGTGCCATTCAGGAGCGGTTCGGAATACAATCTCGAGTCGAGAAGATTACCTTTGTCAGAATGGTGGACAAAGAGGAAACAGTTGTGGACAAAGGGGAAGAGGATGCTGGAATGGTGGCTAATCAAGCTTTTATTGCAACTCAAAGTAACAATTCGTTTGTAGCTACACTAGAATCAGTTGTTGATCCTAGATGGTATATGGATAGTGGAGCTTCAAATCACGTCGTAGGGGATCCAAACAACTTTAGTCACTCTTCTGAACACATGAAGGCACTGAAAAGGTTACTGTTGGTAATGGTTGTGCTTTATCTATTTCTCATATTGGCTCATGTTCTCTAG

Coding sequence (CDS)

ATGGGGCACGAGAGTGCCCAAAGTCTGTGGAGTGCCATTCAGGAGCGGTTCGGAATACAATCTCGAGTCGAGAAGATTACCTTTGTCAGAATGGTGGACAAAGAGGAAACAGTTGTGGACAAAGGGGAAGAGGATGCTGGAATGGTGGCTAATCAAGCTTTTATTGCAACTCAAAGTAACAATTCGTTTGTAGCTACACTAGAATCAGTTGTTGATCCTAGATGGTATATGGATAGTGGAGCTTCAAATCACGTCGTAGGGGATCCAAACAACTTTAGTCACTCTTCTGAACACATGAAGGCACTGAAAAGGTTACTGTTGGTAATGGTTGTGCTTTATCTATTTCTCATATTGGCTCATGTTCTCTAG

Protein sequence

MGHESAQSLWSAIQERFGIQSRVEKITFVRMVDKEETVVDKGEEDAGMVANQAFIATQSNNSFVATLESVVDPRWYMDSGASNHVVGDPNNFSHSSEHMKALKRLLLVMVVLYLFLILAHVL
Homology
[Close]
BLAST of CaUC01G014000 vs. ExPASy TrEMBL
Match: A0A151U7R7 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008029 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.4e-04
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0 

Query: 51  NQAFIATQSNNSFVATLESVVDPRWYMDSGASNHVVGDPNNFSHSSEH 99
           + AFIA+    +F A+  S+ DP WY DSGASNHV  DPN F   SEH
Sbjct: 209 HNAFIASP---NFNASSNSIRDPEWYFDSGASNHVTHDPNQFQEISEH 253

The following BLAST results are available for this feature:
BLAST of CaUC01G014000 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G014000 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G014000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151U7R75.4e-0454.17Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008029 PE=4 SV=1[more]
BLAST of CaUC01G014000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G014000.1CaUC01G014000.1mRNA