CaUC01G013950 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G013950
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr01: 26900684 .. 26901367 (-)
RNA-Seq Expression	CaUC01G013950
Synteny	CaUC01G013950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACCGCCGGCGCCGCCGCTTCCGCCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCTCCGAAACTCCTTGCTCTTCATCTTCTTCTTCTCAATCTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCGGAAACCGATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATCGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATAGGTCAGACACCCACTTGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATCCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGGGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGTATGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCACAAATGGCTAGAACTCAGTAATCGTTGCCCTCTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

mRNA sequence

ATGTCCACCGCCGGCGCCGCCGCTTCCGCCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCTCCGAAACTCCTTGCTCTTCATCTTCTTCTTCTCAATCTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCGGAAACCGATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATCGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATAGGTCAGACACCCACTTGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATCCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGGGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGTATGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCACAAATGGCTAGAACTCAGTAATCGTTGCCCTCTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

Coding sequence (CDS)

ATGTCCACCGCCGGCGCCGCCGCTTCCGCCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCTCCGAAACTCCTTGCTCTTCATCTTCTTCTTCTCAATCTCAACCCCCTGAATTCTTCATCGATTTCTACGTTTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCGGAAACCGATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATCGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATAGGTCAGACACCCACTTGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATCCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGGGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGTATGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCACAAATGGCTAGAACTCAGTAATCGTTGCCCTCTGTGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

Protein sequence

MSTAGAAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE

Homology

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BLAST of CaUC01G013950 vs. NCBI nr
Match: XP_038895883.1 (E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 209/224 (93.30%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 4   AGAAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLR 63
           A AAA+  SGLHCEVWQPQDFSETP SSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLR
Sbjct: 2   AAAAANNNSGLHCEVWQPQDFSETPSSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLR 61

Query: 64  YKNFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRT 123
           YKNFRQRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQISIRARGIATEPINALSRT
Sbjct: 62  YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRT 121

Query: 124 IPMVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEID 183
           IPMVVELMLPEEAMEDS Y SDTH+GI SGRASRASIQ+MER+EIDGVL DCVICLDEI 
Sbjct: 122 IPMVVELMLPEEAMEDSSYGSDTHMGIVSGRASRASIQDMERVEIDGVLSDCVICLDEIV 181

Query: 184 SIGYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           SIGYEIDAVRMPCLHVYHRNCIHKWLE SNRCPLCRFQMPLEEE
Sbjct: 182 SIGYEIDAVRMPCLHVYHRNCIHKWLEFSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CaUC01G013950 vs. NCBI nr
Match: XP_008437461.1 (PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 415.2 bits (1066), Expect = 3.6e-112
Identity = 203/222 (91.44%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 6   AAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYK 65
           +AA+A SGLHCEVWQPQDFSE  CSSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYK
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYK 61

Query: 66  NFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIP 125
           NFRQRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQISIRARGIATEPINALSRTIP
Sbjct: 62  NFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIP 121

Query: 126 MVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSI 185
           MVVELMLPE+AME SGY S+ H+GIGSGRASRASIQEMERIEIDGVL DCVICLDEI SI
Sbjct: 122 MVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSI 181

Query: 186 GYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           G EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CaUC01G013950 vs. NCBI nr
Match: XP_004152533.1 (uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical protein Csa_014260 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 198/219 (90.41%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 10  ATSGLHCEVWQPQDFSETPC-SSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYKNFR 69
           A SGLHCEVWQPQDFSE  C SSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYKNFR
Sbjct: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64

Query: 70  QRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 129
           QRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124

Query: 130 ELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYE 189
           EL+LPE+AMEDSGY S+ H+GIGSGRASRASIQEMERIEIDGVL DCVICLDEI SIG E
Sbjct: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184

Query: 190 IDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           ID V+MPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CaUC01G013950 vs. NCBI nr
Match: KAG6584266.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 196/227 (86.34%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MSTAGAAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIIS 60
           MSTA AAA+A SGLHCEVWQPQDFSET CS SSSS S+ PEFFIDFYVSSYATQGD+IIS
Sbjct: 1   MSTA-AAAAAVSGLHCEVWQPQDFSETHCSFSSSS-SESPEFFIDFYVSSYATQGDQIIS 60

Query: 61  TLRYKNFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINAL 120
           TLRYKNFRQRCDVLTQDSFSWSAIS+MLSET+VPYHLQPFFI QISI ARGIATEP NAL
Sbjct: 61  TLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNAL 120

Query: 121 SRTIPMVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLD 180
           SRTIPMVVEL+LPEEAMEDSGY SDT +G GS RASRASIQEMER+E++GVL DCVICLD
Sbjct: 121 SRTIPMVVELVLPEEAMEDSGYGSDTIMGTGSRRASRASIQEMERVEMNGVLSDCVICLD 180

Query: 181 EIDSIGYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           +I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 DIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CaUC01G013950 vs. NCBI nr
Match: KAG7019862.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.6 bits (1002), Expect = 9.4e-105
Identity = 194/227 (85.46%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MSTAGAAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIIS 60
           MST  AAA+A SGLHCEVWQPQDFSET CS SSSS S+ PEFFIDFYVSSYATQGD+IIS
Sbjct: 1   MSTV-AAAAAVSGLHCEVWQPQDFSETHCSFSSSS-SESPEFFIDFYVSSYATQGDQIIS 60

Query: 61  TLRYKNFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINAL 120
           TLRYKNFRQRCDVLTQDSFSWSAIS+MLSET+VPYHLQPFFI QISI ARGIATEP NAL
Sbjct: 61  TLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNAL 120

Query: 121 SRTIPMVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLD 180
           SRTIPMVVEL+LPEEAMEDSGY SDT +G GS RASR SIQEMER+E++GVL DCVICLD
Sbjct: 121 SRTIPMVVELVLPEEAMEDSGYGSDTIMGTGSRRASRTSIQEMERVEMNGVLSDCVICLD 180

Query: 181 EIDSIGYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           +I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 DIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIHKWLE 210
           G   AS+ASI  M  +EIDG  G+CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 211 LSNRCPLCRFQMPLE 226
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEI-----DGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCI 210
           G+  AS+++I  +  +++        +  C +C+DE +      D  +MPC HV+H++C+
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED---GSDVKQMPCKHVFHQDCL 246

Query: 211 HKWLELSNRCPLCRFQMPLEE 227
             WLEL N CP+CRF++P ++
Sbjct: 247 LPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.1e-10
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEID----GVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIH 210
           G+  AS+++I+ + R+EI     G   +C +C +  ++   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 211 KWLELSNRCPLCRFQMPLE 226
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.9e-10
Identity = 29/76 (38.16%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIHKWLE 210
           G+  A + +++ +  ++I+ V+  C +CLD+++ +G +  A +MPC H +H +CI  WLE
Sbjct: 176 GTPPAKKEAVEALPTVKIEEVV-SCSVCLDDLE-VGSQ--AKQMPCEHKFHSSCILPWLE 235

Query: 211 LSNRCPLCRFQMPLEE 227
           L + CP+CRF++P EE
Sbjct: 236 LHSSCPVCRFELPSEE 247

[Close]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 26/81 (32.10%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEI-----DGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCI 210
           G+  AS+++I+ +  + I     +     C +C+D+ +      +A +MPC H+YH++C+
Sbjct: 195 GTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEE---GTEAKQMPCKHLYHKDCL 254

Query: 211 HKWLELSNRCPLCRFQMPLEE 227
             WLEL N CP+CR ++P ++
Sbjct: 255 LPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL
Match: A0A5D3BJ05 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003020 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112
Identity = 203/222 (91.44%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 6   AAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYK 65
           +AA+A SGLHCEVWQPQDFSE  CSSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYK
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYK 61

Query: 66  NFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIP 125
           NFRQRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQISIRARGIATEPINALSRTIP
Sbjct: 62  NFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIP 121

Query: 126 MVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSI 185
           MVVELMLPE+AME SGY S+ H+GIGSGRASRASIQEMERIEIDGVL DCVICLDEI SI
Sbjct: 122 MVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSI 181

Query: 186 GYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           G EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL
Match: A0A1S3AU71 (uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112
Identity = 203/222 (91.44%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 6   AAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYK 65
           +AA+A SGLHCEVWQPQDFSE  CSSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYK
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYK 61

Query: 66  NFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIP 125
           NFRQRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQISIRARGIATEPINALSRTIP
Sbjct: 62  NFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIP 121

Query: 126 MVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSI 185
           MVVELMLPE+AME SGY S+ H+GIGSGRASRASIQEMERIEIDGVL DCVICLDEI SI
Sbjct: 122 MVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSI 181

Query: 186 GYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           G EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL
Match: A0A0A0LR28 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.2e-109
Identity = 198/219 (90.41%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 10  ATSGLHCEVWQPQDFSETPC-SSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYKNFR 69
           A SGLHCEVWQPQDFSE  C SSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTLRYKNFR
Sbjct: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64

Query: 70  QRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 129
           QRCDVLTQDSFSWSAISSMLSET+VPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124

Query: 130 ELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYE 189
           EL+LPE+AMEDSGY S+ H+GIGSGRASRASIQEMERIEIDGVL DCVICLDEI SIG E
Sbjct: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184

Query: 190 IDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           ID V+MPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL
Match: A0A6J1KQS3 (uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.7e-105
Identity = 194/227 (85.46%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MSTAGAAASATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIIS 60
           MSTA AAA+A SGLHCEVWQPQDFSET CS SSSS S+ PEFFIDFYVSSYATQGD+IIS
Sbjct: 1   MSTA-AAAAAVSGLHCEVWQPQDFSETHCSFSSSS-SESPEFFIDFYVSSYATQGDQIIS 60

Query: 61  TLRYKNFRQRCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINAL 120
           TLRYKNFRQRCDVLTQDSFSWSAIS+MLSET+VPYHLQPFFI QISI ARGIATEP NAL
Sbjct: 61  TLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNAL 120

Query: 121 SRTIPMVVELMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEIDGVLGDCVICLD 180
           SRTIPMVVEL+LPEEAMEDS Y SDT +G GS RASRASIQEMER+E++G L DCVICLD
Sbjct: 121 SRTIPMVVELVLPEEAMEDSSYGSDTIMGTGSRRASRASIQEMERVEMNGALSDCVICLD 180

Query: 181 EIDSIGYEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           +I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 DIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL
Match: A0A6J1CAF5 (E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC111008905 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.3e-75
Identity = 151/220 (68.64%), Postives = 173/220 (78.64%), Query Frame = 0


Query: 10  ATSGLHCEVWQPQDFSETPCSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTLRYKNFRQ 69
           + +GLHCEVWQPQ+++E+ CSSSS   S+PPEFFID YVSSYA QG E IS+LRYKNFR+
Sbjct: 2   SAAGLHCEVWQPQEWAESDCSSSS---SEPPEFFIDLYVSSYANQGGETISSLRYKNFRR 61

Query: 70  RCDVLTQDSFSWSAISSMLSETDVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVVE 129
           R DV TQDS SWSAIS+MLSET VPYHLQPFFI  IS+RAR IA +P NALSRTIP+VVE
Sbjct: 62  RRDVFTQDSLSWSAISTMLSETSVPYHLQPFFIQHISLRARRIAAQPTNALSRTIPIVVE 121

Query: 130 LMLPEEAMEDSGYRSDTHLGIGSGRASRASIQEMERIEID-GVL-GDCVICLDEIDSIGY 189
           L+LP    E+SG  SD  +  G GRASRASI+EMER EI+ G+  GDC ICLDEI     
Sbjct: 122 LVLPLPEEEESGSGSDPRVPNGPGRASRASIEEMERAEIELGICGGDCAICLDEI----- 181

Query: 190 EIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 228
           E  AV MPC H+YHRNCI KWL+ +N CPLCRFQMPLE E
Sbjct: 182 ECGAVGMPCSHIYHRNCIVKWLQQNNLCPLCRFQMPLEME 213

[Close]

BLAST of CaUC01G013950 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-14
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIHKWLE 210
           G   AS+ASI  M  +EIDG  G+CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 211 LSNRCPLCRFQMPLE 226
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of CaUC01G013950 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEI-----DGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCI 210
           G+  AS+++I  +  +++        +  C +C+DE +      D  +MPC HV+H++C+
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED---GSDVKQMPCKHVFHQDCL 246

Query: 211 HKWLELSNRCPLCRFQMPLEE 227
             WLEL N CP+CRF++P ++
Sbjct: 247 LPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CaUC01G013950 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEID----GVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIH 210
           G+  AS+++I+ + R+EI     G   +C +C +  ++   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 211 KWLELSNRCPLCRFQMPLE 226
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of CaUC01G013950 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 29/76 (38.16%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEIDGVLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIHKWLE 210
           G+  A + +++ +  ++I+  L  C +CLD+ + IG E  A  MPC H +H +C+  WLE
Sbjct: 200 GTPPAKKEAVEALATVKIEETL-QCSVCLDDFE-IGTE--AKLMPCTHKFHSDCLLPWLE 259

Query: 211 LSNRCPLCRFQMPLEE 227
           L + CP+CR+Q+P +E
Sbjct: 260 LHSSCPVCRYQLPADE 271

[Close]

BLAST of CaUC01G013950 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 26/77 (33.77%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 151 GSGRASRASIQEMERIEIDG----VLGDCVICLDEIDSIGYEIDAVRMPCLHVYHRNCIH 210
           G+  AS+++I+ + R+EI         +C +C +  ++    I+   MPC H++H +CI 
Sbjct: 187 GNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEA---GIEGREMPCKHIFHGDCIV 246

Query: 211 KWLELSNRCPLCRFQMP 224
            WL + N CP+CRF++P
Sbjct: 247 PWLSIRNSCPVCRFELP 260

The following BLAST results are available for this feature:

BLAST of CaUC01G013950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895883.1	2.0e-115	93.30	E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida]	[more]
XP_008437461.1	3.6e-112	91.44	PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ub...	[more]
XP_004152533.1	1.1e-108	90.41	uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical ...	[more]
KAG6584266.1	1.1e-105	86.34	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019862.1	9.4e-105	85.46	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CaUC01G013950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	3.9e-13	48.00	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	3.1e-10	33.33	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	4.1e-10	36.71	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q6AVN2	6.9e-10	38.16	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
P0CH30	1.5e-09	32.10	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of CaUC01G013950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ05	1.7e-112	91.44	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AU71	1.7e-112	91.44	uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=...	[more]
A0A0A0LR28	5.2e-109	90.41	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 P...	[more]
A0A6J1KQS3	7.7e-105	85.46	uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638...	[more]
A0A6J1CAF5	1.3e-75	68.64	E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of CaUC01G013950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	2.8e-14	48.00	RING/U-box superfamily protein	[more]
AT3G19950.1	2.2e-11	33.33	RING/U-box superfamily protein	[more]
AT5G59550.1	2.9e-11	36.71	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G55530.1	1.4e-10	38.16	RING/U-box superfamily protein	[more]
AT3G46620.1	5.4e-10	33.77	zinc finger (C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 175..218 e-value: 4.4E-8 score: 42.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 174..219 e-value: 3.9E-12 score: 46.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 175..219 score: 12.769585
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 145..224 e-value: 1.4E-16 score: 62.0
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 41..223
None	No IPR available	PANTHER	PTHR15710:SF138	FINGER PROTEIN, PUTATIVE-RELATED	coord: 41..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 174..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G013950.1	CaUC01G013950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding