CaUC01G013610 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G013610
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr01: 26583783 .. 26590881 (+)
RNA-Seq ExpressionCaUC01G013610
SyntenyCaUC01G013610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTACCGAGCCAATTTCAGCGCTCATCTGCTCCCGCCCGTTGTTCTTCGCTGCTGCTGCAACTCTCTCGGTGAAATCAATAAGCAAATCGGAGAATTCGGTTCTGAAATTTTCAGTGCTTTTTGTTTTTTGGTTATAATCTCAGTCTGTTCTTTGTCGCTTGTTAATTGCTCTCAATCTTGTCTTTGAAGAGAAACGATTACGGCTGGTAAATTGCAATTCGTTTATTTCCTGTACTCAAGTGGCTAATGAAAACTAGATTCCTGTAATGGCGCTCTCACCCTATTTGTCAGTGCCGAATCGGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTGTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTCGTCCTCCGACGCTGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTACAGTTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGCAGCATAGCTCGTTGTCTCGATATTTTCAAGAATAGGCTTTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAGTACATGCAGCGTCAGATATGGTGCAAGCCAAACGAGCACATCTATACCATCATGATCAGCTTGCTTGGACGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGCGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGAAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAGCGAGAGAGAGTTTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTAGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAGCCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACAATGATTGAGGGAGGGATAGTCCCTGAGATAACAACATATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTTGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCGGATATATCGTCGTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTTCGAGAGCTTTTTCTTGAGATGAAAGAGAGTAGTGCTGAGCCGGATGCAACTACTTACAACATTCTTATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTACACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAGAGCATATAGTGGACTGATTGAAGCATACGGACTGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAGTCAACTGTTGATACCTACAATTCGCTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATCGAGAATGAGAGAATATGGCATTTCAAGGAATGCAAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTCGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCATGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTGTGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGGTAACGATTATTATGTATATATATATTTGTCCATGTAAGTTATGCTCGTTATCAACTTATGTTTTCTTAATTTTATTTCCAGTTGGTATAACTGTACAGGGTACTTATCTAGAATTCTGCAGGCATTGGAGGTTGGTTAGTTAGAATGTGTGTGGTTATATGAGATGATTGGAGTTTGTTAGAGTTTTTTGTGGGGAATTGTTAGTGGCCAACAGTTATAAACAAGAAGAGGAGCAGGGAGGGGAGGGGAGGTGGGCTAAAGAGAGAGATATTCAAGTTTCTTAAATTAAAAAGTTATATTTGAATCTTGAAATAGATTATATTATTATTTTCATTAAAGAAAACATTTATTACTTTTGTTCTCTCTCAGCTCTAAGAATTATATCATAGCCTTTATATGATCTTGAGAACTTGGAGATTGGTCCACACTAAATCAGCTTTGGTGCATGACATCTAAAATTAGCATATGAAACTACCAATTAAGGTTTTGATACATATAATTTGGTTGTATGAGACATAATTTGGTTGTATCTTGCTGTAAATGCTCCCGTCCTTCACTACCATAAATTTTCCTCCCTTCTCTCTAATTGGAGAGGTCTTTTGTAATACTCCACATGGGATCTCTTCTTTTCTAATTTCATACTATCAATGACATTGTTGCTTTATCAAATAATTTATACACACACACACACACATAGGATGTGATACATTATGGAAAGGAAAGACGAGCTATTTTATTTATAGGGTGTAGTCTCTTGTCAACTTGTAAGATATAGGAGGTTTATGTTAGATCATTGTTGTCTATTCCTAGGTGTCAGCTTTTATATTATTGCATAGCATAAGATCTTCGGCAGCTGCTTCAAGTTGCATGACTAAAATGTCTATGCCAAGCCATAAACTTTCTGGGGTTCCCTTGCTTAGTAGATTGATAGTAAGAGGACTTAATGTAGGCGTCCCAGAGGGTTCCGAGTTGGGTAGAAACTCCCTCCCTGTCAATCGTCTCCAGTTCGTGGATAGACTATCCTCTCGTCTTCCATAGAAAAATTGTTGATGTACGAAAATAATTTATTTTCTTGTGGGGCCCTAAAATGGCGTTTTTAATCTGAAATAGTAATTGGCCTCAAGTAAAAAGATTGTGGTGGGGAAAAAAAGAAAATACCAAATTTCTAGACAATTGGAAAGATACAGAAACTCTCTAGTCTACAGTTTATACTATTTCTTTCACTTTATGATCACCAATATCAGTGGCCTCTAGATCAGTATAACGTGGAATTCCTCAAGTTAAACCTGGGATTTTACACGAGAAGAAATCTGATGGCTTGGAAGTTGGAGAATGGATATTCCTCCTGGACGCCCTCGGTGGCTGTGTGTGAACCTATTCTTTCAGTTGCAAATCCATCTTGAAGATTTCACTGAAAGTCCTCAAATTCTTAACCAAACCCTTTGGAAAAAGGGACGGATAAATACCCAAGGCAAAATTCAAAGGAAAAGTTCAGACCTCTGGATTTCATCCCATTGCTCTAAGATGTGGAAAGTCAACAGGGAGACCCAATTATCTGATTGTTCTTGTCCCATGGCCTTTGGATTATGCGATTAAATTTTGGTAATTTTGGCTGGCCTGATGCTTTTCTTAGGACCATTACCAACCTGCTTCACTTCCTCTTTGGAGGACATCTGAATGAAATAATTTTTGTGGTTGCTTGGCTACTTGGTGTAAACTTAACAATCTTTTTGTAATTATAGTTCAACCTCTGTTTGTGCCAATTGTAAGTTCTTTGTATCTTCCTTAGCTTGGATTGGGGCTTTCCTCTCTCTCATTCCGTGATAGATAATTCACTTGATCAATTAAAGAAAGTTCTAAAAGAATGCCAAAGTTTATTGTGAAAAAAGAAAAGAAACCTTTCCCTTTTCTTTTGATATTTCAATGTCTGCAAAATAGTCTGATTTGCATCTAAAACATTCTTCTTTCTCAAAATTCCTCATTTCATGCAACATGGTCATAACCTTGGCATGTTTATTAGCCTTATTTAAGATAGAAACTCATTGCATGGACCATGAAGTCTGGTCATTTATAGATGTACACCGAGTTATAGGGAAGACTTTGTCTGTCGACATTAGTTTGTTTACTTTTACCTTGTATGAACATTATGTTTTCCTCAGGGTTGACATTTTTGTTTGATTTTTTCCCCAGCAATTATCACTAATTAAATACATGGAAAAATTGAAGTAATATCTGGTTTGAAATCTTACAGTCCTAAAGTTCTCACTTCATCAAATTTGATTTTTGATCATTCGATCTTCTAGTTGATTGATTTTACAAATACTTTATTTTAATGCTCTCTCTTACATCTCAGAGTTCATTCTTTCCAGGTGGGATGATGCCTATGAATTACTCGATGAGATGGTTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTATGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAACACACTGCTAGAAGCGCTTTGGTGGCTTGGCCAGAAAGGACGTGCTGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTGTTCCCTGAACTTTACCGCAAAAGCAAACTTGTGTGGTCTGTGGATGTGCACAGGTATGATAAGAATAAGTTTCTGTTCCATGTTGACTACCTGATACCTGTTCTTGAGTTTATACTAATCTGATGTCTGGCCTTCCTACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGGTTAACAAAATGAATGAAATGCTTCTGGATGGGGAGGATCTCCCTCAGCTTGCAACTGTCGTAGTTGGGTAAGCTTCATTTATCTTGCAATCAATTTAATCAAGGTTAAATTTTCTGAATTGAAGTGTCATTCATGGTGGAGGCATATATGATTAAGCAAGGGTTTCCTTAGTCCAGCCGAAGCAAATCTTCTTCTTCTAAGCCTCTTGGACGTGACCAATTTTGTGAAGCTATATGTGCACGTAGCTAATATGCTGGTTAAAAAATGCTCTCTTTTAGTTTAGCATCCTAAATTACACTTAGGGTATCACTGAAATGTCCGGAAGTTGTTATTGGAAGTAAAGTAGATTAAGCTTTTTAAGTAGTTATTTACATGATGCTGTCTGAATATGCTTGATTTTAAGGGAGGACCGCATGGAGGCCCCATGAATTTCTGACTATTGGTGAACAACAATAAGTTGTGAAATTGTATTCTCAGGGTTAATTATATAGAGAGGAGAAAGAGCTTCAATCCAAAGGAGTTACAATAACATCTCCAATTGGACAGAAGTGTTGCAGGACTATAAGAATGAAAAAGACTTGAACATTTGCACGCCAAAACATTGCAAGACGTACAATATTTATATTGTCGAAAAGTCTCTCAAAAGACTGCTCCTTTTCAGCAAATAATCTCTGATTTCGACCTATAGGTATGGCCAGCCTTCGAGAGTGAGAGATAGTAGACAGCTAAAACCAATAGGCAAAGCCACTGTCCAGTCTAAACCGAAAGTGACTCCAAAATTTTGTGGCAATTGGGCAGGTGAGGAATAAGTGTCCTTGTGATTTTGTACTTTGTTTGGAAAGGACTCGCCATTGGGGGTGATTGACTAATAGGGCACTCTATTTTGGGGCATATCATGAGTACTGATTAGGAGAGACTAGAGAGTTCCCGAAAGAAAGAATGCGTTGTGAGAGAGTTCCCCAAGGGTAATGGTCACTCCATACAGTCTTAACTCTTTAGTAGATGGTGTTGAATGTGATCTTCTTTGTGAGTCAAGTCTGACAACAAGGATTTTGTTTATAACGCCCCTCATTTTTCAAGTTTCCAAGATCAGATATCTTCTGTTTGTACAAGGTTGTTGCATATTGTTATACTTTCAGTCTACTTGATATGAAAGCTAGTTGCCAAGTCTTTAGAAATCAACTCTTTTCTCATTGCACTAAATGGAATTTTACTTGCCTTGTACTTTTACGAGGGTTCATCGATTGTTTGTCAACCAAATATTTTCAAATTTTCAGCAGGGGTTGGTTGGAGAAAGACTCAACCGCACAAAACTTGCCTATCGCAAGGGCAGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCTTGTTTCCTGGGTGGAACAATGGTCGAATCGTCTGCCAACAATCTCAATTAAAGCAGCTCCTCTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAATCTTCCAGAAGCGAAGACATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTGAAAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGAATGAAATACAAGGTTGAAAATCTAGTTTTCAAGTTTTGAAACTCATCACCTCCCATTTTTATTGGAAGGATGTGATCGATGGGGCTCTTCGACTTCGAAAGAACTTAACCAAATGATAGTCTCACAGCATTCAGGTGGTGGCAACATTGCTTGCGATGATTCACTTATAAGAGGCCAATTTGATCGATTCAAGGAAGAAGATGCATGCCCAAGTAAGAGGTTAGTGTTTTTGTAGCTTTAGAATTAATATTCTTTACTCGAAAAGGAAAAGCTGTTTATTAGTGTAATTGTTAGACCAGCGGTTTAAGTCTATGTGAACTAATCAGGGAGATGTAATATCTCTTACATTTGGAATTCCGCAACTATGAATAGAGAATATGGAGGATTAGCAAAAATGCCTTCACCTTTTTTGCTGACTCTCATACATTTTAGGTCGGTTTGTTTTAGAGCTATCTTTTAGGGGACAAAAACTTTTTGGTCTTGTGATCTTCATTTGGTCCATACGCTTGCATAATGTTACACTTATACCCATGAAGTTCGAGTTTAGTTTCTATATGG

mRNA sequence

CTACTACCGAGCCAATTTCAGCGCTCATCTGCTCCCGCCCGTTGTTCTTCGCTGCTGCTGCAACTCTCTCGGTGAAATCAATAAGCAAATCGGAGAATTCGGTTCTGAAATTTTCAGTGCTTTTTGTTTTTTGGTTATAATCTCAGTCTGTTCTTTGTCGCTTGTTAATTGCTCTCAATCTTGTCTTTGAAGAGAAACGATTACGGCTGGTAAATTGCAATTCGTTTATTTCCTGTACTCAAGTGGCTAATGAAAACTAGATTCCTGTAATGGCGCTCTCACCCTATTTGTCAGTGCCGAATCGGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTGTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTCGTCCTCCGACGCTGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTACAGTTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGCAGCATAGCTCGTTGTCTCGATATTTTCAAGAATAGGCTTTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAGTACATGCAGCGTCAGATATGGTGCAAGCCAAACGAGCACATCTATACCATCATGATCAGCTTGCTTGGACGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGCGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGAAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAGCGAGAGAGAGTTTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTAGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAGCCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACAATGATTGAGGGAGGGATAGTCCCTGAGATAACAACATATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTTGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCGGATATATCGTCGTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTTCGAGAGCTTTTTCTTGAGATGAAAGAGAGTAGTGCTGAGCCGGATGCAACTACTTACAACATTCTTATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTACACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAGAGCATATAGTGGACTGATTGAAGCATACGGACTGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAGTCAACTGTTGATACCTACAATTCGCTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATCGAGAATGAGAGAATATGGCATTTCAAGGAATGCAAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTCGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCATGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTGTGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGTTGGTATAACTGTACAGGGTACTTATCTAGAATTCTGCAGGCATTGGAGGTTGGGAGACCCAATTATCTGATTGTTCTTGTCCCATGGCCTTTGGATTATGCGATTAAATTTTGGTGGGATGATGCCTATGAATTACTCGATGAGATGGTTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTATGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAACACACTGCTAGAAGCGCTTTGGTGGCTTGGCCAGAAAGGACGTGCTGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTGTTCCCTGAACTTTACCGCAAAAGCAAACTTGTGTGGTCTGTGGATGTGCACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGGTTAACAAAATGAATGAAATGCTTCTGGATGGGGAGGATCTCCCTCAGCTTGCAACTGTCGTAGTTGGGGGTTGGTTGGAGAAAGACTCAACCGCACAAAACTTGCCTATCGCAAGGGCAGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCTTGTTTCCTGGGTGGAACAATGGTCGAATCGTCTGCCAACAATCTCAATTAAAGCAGCTCCTCTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAATCTTCCAGAAGCGAAGACATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTGAAAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGAATGAAATACAAGGTTGAAAATCTAGTTTTCAAGTTTTGAAACTCATCACCTCCCATTTTTATTGGAAGGATGTGATCGATGGGGCTCTTCGACTTCGAAAGAACTTAACCAAATGATAGTCTCACAGCATTCAGGTGGTGGCAACATTGCTTGCGATGATTCACTTATAAGAGGCCAATTTGATCGATTCAAGGAAGAAGATGCATGCCCAAGTAAGAGGTTAGTGTTTTTGTAGCTTTAGAATTAATATTCTTTACTCGAAAAGGAAAAGCTGTTTATTAGTGTAATTGTTAGACCAGCGGTTTAAGTCTATGTGAACTAATCAGGGAGATGTAATATCTCTTACATTTGGAATTCCGCAACTATGAATAGAGAATATGGAGGATTAGCAAAAATGCCTTCACCTTTTTTGCTGACTCTCATACATTTTAGGTCGGTTTGTTTTAGAGCTATCTTTTAGGGGACAAAAACTTTTTGGTCTTGTGATCTTCATTTGGTCCATACGCTTGCATAATGTTACACTTATACCCATGAAGTTCGAGTTTAGTTTCTATATGG

Coding sequence (CDS)

ATGGCGCTCTCACCCTATTTGTCAGTGCCGAATCGGTTCAAAACTTCTACGACGTTTCAGAAACGGTATTTAGAGTGTCAACAACTTCCATTTCTGTCAAAACTTTCCAATTTCAGTGTTCGCCGTAGATTTTTCTCAGATGACTGGAGCTCGTCCTCCGACGCTGGGAAGTGCAGAGCGAAGCCGAAGGATCTTGTTCTTGGAAATCCATCGGTAATTGTTGAGAAAGGCAAGTACAGTTATGACGTTGAAACCCTAATTAATAAGCTCAGTAGCCTCCCGCCACGAGGCAGCATAGCTCGTTGTCTCGATATTTTCAAGAATAGGCTTTCGCTCAATGACTTCAGCTTGGTTTTCAAGGAATTCGCGGCGCGCGGGGACTGGCAACGCTCGTTACGCTTGTTCAAGTACATGCAGCGTCAGATATGGTGCAAGCCAAACGAGCACATCTATACCATCATGATCAGCTTGCTTGGACGCGAAGGATTGCTAGAGAAATGTAGTGAGATATTCGATGAAATGGCGAGCCAGGGCGTGATACGCAGCGTTTTTTCTTATACCGCTTTGATAAACGCCTACGGGCGAAATGGTCAGTACGAAACCTCACTTGAACTTCTTGAAAGGATGAAGCGAGAGAGAGTTTCGCCTAATATATTGACTTACAATACCGTGATAAATGCTTGTGCTAGAGGTGATTTGGATTGGGAGGGATTGTTAGGATTGTTTGCCGAGATGAGGCATGAAGGGGTTCAGCCTGATCTGGTTACTTATAATACTTTGCTTAGTGCATGTGCTGCCCGCGGTTTAGGTGATGAGGCAGAGATGGTCTTCAAGACAATGATTGAGGGAGGGATAGTCCCTGAGATAACAACATATAGTTATATTGTTGAAACATTTGGAAAATTGGGTAAGCTTGAGAAAGTTGCTATGCTGCTAAAAGAAATGGAGTCCGAAGGGTATTTGCCGGATATATCGTCGTACAATGTGTTAATAGAGGCACATGCAAAATCAGGGTCGATTAAGGAGGCAATGGACGTGTTTAAGCAGATGCAAGCAGCAGGATGTGTGCCAAATGCATCCACTTATAGTATTCTGTTGAATTTATATGGGAAACATGGGAGGTATGATGATGTTCGAGAGCTTTTTCTTGAGATGAAAGAGAGTAGTGCTGAGCCGGATGCAACTACTTACAACATTCTTATACGAGTATTTGGAGAGGGTGGATACTTCAAGGAGGTTGTAACTCTGTTTCATGATTTGGTGGAGGAGAAGATTGACCCAAATATGGAGACATATGAGGGGTTAGTATTTGCTTGTGGAAAGGGAGGGCTACACGAGGATGCCAAGAAAATTTTACTTCACATGAATGAGAAAGGAATGGTTCCAAGTTCTAGAGCATATAGTGGACTGATTGAAGCATACGGACTGGCTGCATTGTATGATGAAGCTCTTGTTGCCTTTAACACAATGAACGAAGTGGGAAGTAAGTCAACTGTTGATACCTACAATTCGCTAATTCACACATTCGCTAGAGGTGGACTATACAAGGAGTTTGAAGCAATCTTATCGAGAATGAGAGAATATGGCATTTCAAGGAATGCAAAGTCATTTAGTGGTATTATTGAAGGTTATAGGCAAAGTGGTCAGTTTGAAGAAGCTATAAAGGCCTTTGTTGAGATGGAAAAAATGAGATGTGAACCTGATGAGCAGACCCTCGAGGCAGTTTTAGGTGTTTATTGCTTTGCAGGTCTTGTGGATGAGAGCAAGGAGCAGTTTCATGAAATTAAAGCTTCAGGAATATTGCCTAGTGTATTGTGCTACTGCATGATGCTGGCAGTTTATGCCAAGAATGGCAGTTGGTATAACTGTACAGGGTACTTATCTAGAATTCTGCAGGCATTGGAGGTTGGGAGACCCAATTATCTGATTGTTCTTGTCCCATGGCCTTTGGATTATGCGATTAAATTTTGGTGGGATGATGCCTATGAATTACTCGATGAGATGGTTAAAAACAGGGTATCTAGTATTCATCAAGTCATTGGCCAGATGATCAAGGGAGATTATGATGATGATTCTAATTGGCAGATGGTTGAGTATGTTTTTGACAAACTTAACGCTGAAGGGTGTGGATTGGGAATGAGATTTTACAACACACTGCTAGAAGCGCTTTGGTGGCTTGGCCAGAAAGGACGTGCTGCGAGGGTTCTCACTGAAGCAACAAAACGAGGCCTGTTCCCTGAACTTTACCGCAAAAGCAAACTTGTGTGGTCTGTGGATGTGCACAGAATGTGGGAAGGTGGTGCATATACTGCAATATCACTTTGGGTTAACAAAATGAATGAAATGCTTCTGGATGGGGAGGATCTCCCTCAGCTTGCAACTGTCGTAGTTGGGGGTTGGTTGGAGAAAGACTCAACCGCACAAAACTTGCCTATCGCAAGGGCAGTCTATTCATTCCTGCAGGATAATGTGTCGTCATCCTTCTTGTTTCCTGGGTGGAACAATGGTCGAATCGTCTGCCAACAATCTCAATTAAAGCAGCTCCTCTCAGAAGCAGAAGCATCATCTAGTGAAATTATTACTCTAAATAATTCCCCATTAAATCTTCCAGAAGCGAAGACATCAAGATCTGGTATAAACAATGACAAATACAATGATGTTGATTCTAAATCAAGTGAAAGGACAGGAACTGAGCTTCTGACTACAACTGTTTGA

Protein sequence

MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRAKPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDDAYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMNEMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVCQQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELLTTTV
Homology
[Close]
BLAST of CaUC01G013610 vs. NCBI nr
Match: XP_038894204.1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 1670.2 bits (4324), Expect = 0.0e+00
Identity = 838/904 (92.70%), Postives = 849/904 (93.92%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPYLSVPN FKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWS SSD  KCRA
Sbjct: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVAKCRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM+EGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMVEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEEKIDPNMETYEGLV+ACGKGGLHEDAKKI+ HMNEKGMVPSS+AYSGLIEAYG AALY
Sbjct: 421 VEEKIDPNMETYEGLVYACGKGGLHEDAKKIIRHMNEKGMVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAIL RMRE+GISRNAKSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREHGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQFEEAIKAFVEMEKMR EPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI
Sbjct: 541 IEGYRQSGQFEEAIKAFVEMEKMRFEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LP+VLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPNVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRAARVLTEATKRGLFPEL+RK KLVWSVDVHRMWEG AYTA+SLWVNKMN
Sbjct: 721 EALWWLGQKGRAARVLTEATKRGLFPELFRKRKLVWSVDVHRMWEGSAYTALSLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGEDLPQLA VVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDLPQLAAVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLLS AEASSSEIITLNNSPLNLPEAK SRSGINNDKY DVDSKSS RTGTELL
Sbjct: 841 QQSQLKQLLSNAEASSSEIITLNNSPLNLPEAKISRSGINNDKYKDVDSKSSNRTGTELL 866

Query: 901 TTTV 905
           TTT+
Sbjct: 901 TTTI 866

[Close]
BLAST of CaUC01G013610 vs. NCBI nr
Match: XP_038894203.1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1665.6 bits (4312), Expect = 0.0e+00
Identity = 838/905 (92.60%), Postives = 849/905 (93.81%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPYLSVPN FKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWS SSD  KCRA
Sbjct: 1   MALSPYLSVPNPFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSLSSDVAKCRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM+EGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMVEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEEKIDPNMETYEGLV+ACGKGGLHEDAKKI+ HMNEKGMVPSS+AYSGLIEAYG AALY
Sbjct: 421 VEEKIDPNMETYEGLVYACGKGGLHEDAKKIIRHMNEKGMVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAIL RMRE+GISRNAKSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILLRMREHGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQFEEAIKAFVEMEKMR EPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI
Sbjct: 541 IEGYRQSGQFEEAIKAFVEMEKMRFEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LP+VLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPNVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRAARVLTEATKRGLFPEL+RK KLVWSVDVHRMWEG AYTA+SLWVNKMN
Sbjct: 721 EALWWLGQKGRAARVLTEATKRGLFPELFRKRKLVWSVDVHRMWEGSAYTALSLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVG-GWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIV 840
           EML+DGEDLPQLA VVVG GWLEKDSTAQNLPIARAVYSFLQDNVSSSF FPGWNNGRIV
Sbjct: 781 EMLMDGEDLPQLAAVVVGRGWLEKDSTAQNLPIARAVYSFLQDNVSSSFSFPGWNNGRIV 840

Query: 841 CQQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTEL 900
           CQQSQLKQLLS AEASSSEIITLNNSPLNLPEAK SRSGINNDKY DVDSKSS RTGTEL
Sbjct: 841 CQQSQLKQLLSNAEASSSEIITLNNSPLNLPEAKISRSGINNDKYKDVDSKSSNRTGTEL 867

Query: 901 LTTTV 905
           LTTT+
Sbjct: 901 LTTTI 867

[Close]
BLAST of CaUC01G013610 vs. NCBI nr
Match: XP_008437858.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 1631.7 bits (4224), Expect = 0.0e+00
Identity = 821/904 (90.82%), Postives = 839/904 (92.81%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGED+PQLA VVVGGWLEKDSTA+NLPIARAV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 863

Query: 901 TTTV 905
           TTTV
Sbjct: 901 TTTV 863

[Close]
BLAST of CaUC01G013610 vs. NCBI nr
Match: TYJ99127.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 820/903 (90.81%), Postives = 838/903 (92.80%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGED+PQLA VVVGGWLEKDSTA+NLPIARAV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 862

Query: 901 TTT 904
           TTT
Sbjct: 901 TTT 862

[Close]
BLAST of CaUC01G013610 vs. NCBI nr
Match: KAA0055197.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1628.6 bits (4216), Expect = 0.0e+00
Identity = 820/903 (90.81%), Postives = 837/903 (92.69%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGEDLPQLA VVVGGWLEKDSTA+NLPIA AV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDLPQLAAVVVGGWLEKDSTARNLPIAMAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 862

Query: 901 TTT 904
           TTT
Sbjct: 901 TTT 862

[Close]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 1209.1 bits (3127), Expect = 0.0e+00
Identity = 614/890 (68.99%), Postives = 713/890 (80.11%), Query Frame = 0 

Query: 29  LPFLSKLSNFSVRRRF---------FSDDWSSSSDAGKCRAKPKDLVLGNPSVIVEKGKY 88
           L FL + S+F   RRF            +    S +GK +AK KDLVLGNPSV VEKGKY
Sbjct: 13  LSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGKIKAKTKDLVLGNPSVSVEKGKY 72

Query: 89  SYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQ 148
           SYDVE+LINKLSSLPPRGSIARCLDIFKN+LSLNDF+LVFKEFA RGDWQRSLRLFKYMQ
Sbjct: 73  SYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQ 132

Query: 149 RQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQY 208
           RQIWCKPNEHIYTIMISLLGREGLL+KC E+FDEM SQGV RSVFSYTALINAYGRNG+Y
Sbjct: 133 RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY 192

Query: 209 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 268
           ETSLELL+RMK E++SP+ILTYNTVINACARG LDWEGLLGLFAEMRHEG+QPD+VTYNT
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252

Query: 269 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 328
           LLSACA RGLGDEAEMVF+TM +GGIVP++TTYS++VETFGKL +LEKV  LL EM S G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312

Query: 329 YLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVR 388
            LPDI+SYNVL+EA+AKSGSIKEAM VF QMQAAGC PNA+TYS+LLNL+G+ GRYDDVR
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372

Query: 389 ELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFAC 448
           +LFLEMK S+ +PDA TYNILI VFGEGGYFKEVVTLFHD+VEE I+P+METYEG++FAC
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432

Query: 449 GKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTV 508
           GKGGLHEDA+KIL +M    +VPSS+AY+G+IEA+G AALY+EALVAFNTM+EVGS  ++
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492

Query: 509 DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVE 568
           +T++SL+++FARGGL KE EAILSR+ + GI RN  +F+  IE Y+Q G+FEEA+K +V+
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552

Query: 569 MEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYAKNGS 628
           MEK RC+PDE+TLEAVL VY FA LVDE +EQF E+KAS ILPS++CYCMMLAVY K   
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612

Query: 629 WYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDDAYELLDEMVKNRVSSIHQV 688
                                                 WDD  ELL+EM+ NRVS+IHQV
Sbjct: 613 --------------------------------------WDDVNELLEEMLSNRVSNIHQV 672

Query: 689 IGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEA 748
           IGQMIKGDYDDDSNWQ+VEYV DKLN+EGCGLG+RFYN LL+ALWWLGQK RAARVL EA
Sbjct: 673 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 732

Query: 749 TKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMNEMLLDGEDLPQLATVV-VG 808
           TKRGLFPEL+RK+KLVWSVDVHRM EGG YTA+S+W+N +N+MLL G DLPQLA VV V 
Sbjct: 733 TKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQLAVVVSVR 792

Query: 809 GWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVCQQSQLKQLLSEAEASSSE 868
           G LEK S A+  PIA+A +SFLQD+VSSSF F GWN GRI+CQ+SQLKQLLS  E +S E
Sbjct: 793 GQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEE 852

Query: 869 -----IITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELLTTT 904
                ++ L NSP+     + S S   N   N    ++  RT  EL  +T
Sbjct: 853 SENKNLVALANSPIFAAGTRASTSSDTNHSGNPTQRRT--RTKKELAGST 861

[Close]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.9e-75
Identity = 192/747 (25.70%), Postives = 353/747 (47.26%), Query Frame = 0 

Query: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIF 172
           +D + + +E   R +  +++  +++ ++R+        + + MIS LGR G +     IF
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256

Query: 173 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 232
           +   + G   +V++++ALI+AYGR+G +E ++ +   MK   + PN++TYN VI+AC +G
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG 316

Query: 233 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 292
            ++++ +   F EM+  GVQPD +T+N+LL+ C+  GL + A  +F  M    I  ++ +
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 293 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQ 352
           Y+ +++   K G+++    +L +M  +  +P++ SY+ +I+  AK+G   EA+++F +M+
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 353 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFK 412
             G   +  +Y+ LL++Y K GR ++  ++  EM     + D  TYN L+  +G+ G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 413 EVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLI 472
           EV  +F ++  E + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 473 EAYGLAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYG-- 532
           +A     L   A+   + M + G    V TYNS+I  F R        A + R  +Y   
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR-------SATMDRSADYSNG 616

Query: 533 ----ISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLV 592
                S +A S     EG R    F +            CE   Q L  +L V+      
Sbjct: 617 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF------ 676

Query: 593 DESKEQFHEIKASGILPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVL 652
                + H+++   I P+V+ +  +L   ++  S                          
Sbjct: 677 ----RKMHQLE---IKPNVVTFSAILNACSRCNS-------------------------- 736

Query: 653 VPWPLDYAIKFWWDDAYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLN 712
                       ++DA  LL+E+ +   + ++ V+  ++ G    ++ W   + +FDK+N
Sbjct: 737 ------------FEDASMLLEEL-RLFDNKVYGVVHGLLMG--QRENVWLQAQSLFDKVN 796

Query: 713 AEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWE 772
                    FYN L + LW  GQK  A  V  E   R ++  ++  S L    D+H M  
Sbjct: 797 EMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCL----DLHLMSS 856

Query: 773 GGAYTAISLWVNKMNEMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVS 832
           G A   +  W+  +  ++ +G +LP++ +++  GW +      +  + RAV   L+  + 
Sbjct: 857 GAARAMVHAWLLNIRSIVYEGHELPKVLSILT-GWGKHSKVVGDGALRRAVEVLLR-GMD 876

Query: 833 SSFLFPGWNNGRIVCQQSQLKQLLSEA 853
           + F     N GR     S +   L E+
Sbjct: 917 APFHLSKCNMGRFTSSGSVVATWLRES 876

[Close]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.1e-73
Identity = 156/548 (28.47%), Postives = 273/548 (49.82%), Query Frame = 0 

Query: 86  LINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYM---QRQI 145
           L+N +   P  G ++R  D  K+ L   D   + K     G W+R++ LF+++       
Sbjct: 111 LVNSIVEQPLTG-LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSG 170

Query: 146 WCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS 205
             K +  +  I + +LGRE      +++ D++  Q  +  V +YT +++AY R G+YE +
Sbjct: 171 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 230

Query: 206 LELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLS 265
           ++L ERMK    SP ++TYN +++   +    W  +LG+  EMR +G++ D  T +T+LS
Sbjct: 231 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 290

Query: 266 ACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP 325
           ACA  GL  EA+  F  +   G  P   TY+ +++ FGK G   +   +LKEME      
Sbjct: 291 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 350

Query: 326 DISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 385
           D  +YN L+ A+ ++G  KEA  V + M   G +PNA TY+ +++ YGK G+ D+  +LF
Sbjct: 351 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 410

Query: 386 LEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKG 445
             MKE+   P+  TYN ++ + G+     E++ +  D+      PN  T+  ++  CG  
Sbjct: 411 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 470

Query: 446 GLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTVDTY 505
           G+ +   ++   M   G  P    ++ LI AYG      +A   +  M   G  + V TY
Sbjct: 471 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 530

Query: 506 NSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEK 565
           N+L++  AR G ++  E ++S M+  G      S+S +++ Y + G +    +    +++
Sbjct: 531 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 590

Query: 566 MRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYAKNGSWYN 625
            +  P    L  +L        +  S+  F   K  G  P ++ +  ML+++ +N  +  
Sbjct: 591 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 650

Query: 626 CTGYLSRI 631
             G L  I
Sbjct: 651 AEGILESI 657

[Close]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.7e-71
Identity = 162/549 (29.51%), Postives = 277/549 (50.46%), Query Frame = 0 

Query: 80  SYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQ 139
           S D + L+  +SS  P  ++A  L   ++ L   D + + K     G W+ +L L ++  
Sbjct: 73  SPDAQVLVLAISS-HPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAG 132

Query: 140 RQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEM-ASQGVIRSVFSYTALINAYGRNGQ 199
           ++     +     +++  LGREG  +    + DE     G    V +YT +++A  R G+
Sbjct: 133 KE--GAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGR 192

Query: 200 YETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYN 259
           YE +LEL   ++R+ V+P ++TYN V++   R    W  ++ L  EMR  GV+PD  T +
Sbjct: 193 YERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTAS 252

Query: 260 TLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESE 319
           T+++AC   GL DEA   F+ +   G  P + TY+ +++ FGK G   +   +L EME  
Sbjct: 253 TVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQN 312

Query: 320 GYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDV 379
           G  PD  +YN L   +A++G  +EA      M + G +PNA TY+ ++  YG  G+ D+ 
Sbjct: 313 GCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEA 372

Query: 380 RELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFA 439
             LF +MK++   P+  TYN+++ + G+   F  ++ +  ++      PN  T+  ++  
Sbjct: 373 LALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAV 432

Query: 440 CGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKST 499
           CGK G+ +   ++L  M   G+  S   Y+ LI AYG       A   +N M   G    
Sbjct: 433 CGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPC 492

Query: 500 VDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFV 559
           + TYN+L++  +R G +   ++I+S+MR  G   N +S+S +++ Y + G    A  A +
Sbjct: 493 ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNV--AGIAAI 552

Query: 560 EME---KMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYA 619
           E E        P    L  ++        +D  +  F E+KA G  P ++ +  ML++YA
Sbjct: 553 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 612

Query: 620 KNGSWYNCT 625
           KNG +   T
Sbjct: 613 KNGMYSKAT 616

[Close]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.8e-69
Identity = 132/499 (26.45%), Postives = 255/499 (51.10%), Query Frame = 0 

Query: 131 SLRLFKYM--QRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 190
           +LR F +   Q+      +  +  I+IS+LG+EG +   + +F+ +   G    V+SYT+
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213

Query: 191 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 250
           LI+A+  +G+Y  ++ + ++M+ +   P ++TYN ++N   +    W  +  L  +M+ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 251 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 310
           G+ PD  TYNTL++ C    L  EA  VF+ M   G   +  TY+ +++ +GK  + ++ 
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333

Query: 311 AMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 370
             +L EM   G+ P I +YN LI A+A+ G + EAM++  QM   G  P+  TY+ LL+ 
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393

Query: 371 YGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPN 430
           + + G+ +    +F EM+ +  +P+  T+N  I+++G  G F E++ +F ++    + P+
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453

Query: 431 METYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFN 490
           + T+  L+   G+ G+  +   +   M   G VP    ++ LI AY     +++A+  + 
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513

Query: 491 TMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG 550
            M + G    + TYN+++   ARGG++++ E +L+ M +     N  ++  ++  Y    
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573

Query: 551 QFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYC 610
           +         E+     EP    L+ ++ V     L+ E++  F E+K  G  P +    
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633

Query: 611 MMLAVYAKNGSWYNCTGYL 628
            M+++Y +        G L
Sbjct: 634 SMVSIYGRRQMVAKANGVL 652

[Close]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match: A0A1S3AVM1 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483154 PE=3 SV=1)

HSP 1 Score: 1631.7 bits (4224), Expect = 0.0e+00
Identity = 821/904 (90.82%), Postives = 839/904 (92.81%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGED+PQLA VVVGGWLEKDSTA+NLPIARAV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 863

Query: 901 TTTV 905
           TTTV
Sbjct: 901 TTTV 863

[Close]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match: A0A5D3BJ34 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003320 PE=3 SV=1)

HSP 1 Score: 1630.2 bits (4220), Expect = 0.0e+00
Identity = 820/903 (90.81%), Postives = 838/903 (92.80%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGED+PQLA VVVGGWLEKDSTA+NLPIARAV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDIPQLAAVVVGGWLEKDSTARNLPIARAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 862

Query: 901 TTT 904
           TTT
Sbjct: 901 TTT 862

[Close]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match: A0A5A7UKU1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00380 PE=4 SV=1)

HSP 1 Score: 1628.6 bits (4216), Expect = 0.0e+00
Identity = 820/903 (90.81%), Postives = 837/903 (92.69%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGEDLPQLA VVVGGWLEKDSTA+NLPIA AV SFLQDNVSSSF FPGWNNGRIVC
Sbjct: 781 EMLMDGEDLPQLAAVVVGGWLEKDSTARNLPIAMAVNSFLQDNVSSSFSFPGWNNGRIVC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTELL 862

Query: 901 TTT 904
           TTT
Sbjct: 901 TTT 862

[Close]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match: A0A1S3AUM4 (pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483154 PE=3 SV=1)

HSP 1 Score: 1627.1 bits (4212), Expect = 0.0e+00
Identity = 821/905 (90.72%), Postives = 839/905 (92.71%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SV N F+TS+TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVSNPFRTSSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKARA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           VEE IDPNMETYEGLVFACGKGGLHEDAKKIL HMNEKG+VPSS+AY+GLIEAYG AALY
Sbjct: 421 VEENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNEKGIVPSSKAYTGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEA+VAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEAVVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLEAVLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEAVLGVYCFAGLVDESKEQFVEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           AYELLDEM+KNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 AYELLDEMIKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRA RVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTAISLWVNKMN
Sbjct: 721 EALWWLGQKGRAGRVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVG-GWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIV 840
           EML+DGED+PQLA VVVG GWLEKDSTA+NLPIARAV SFLQDNVSSSF FPGWNNGRIV
Sbjct: 781 EMLMDGEDIPQLAAVVVGRGWLEKDSTARNLPIARAVNSFLQDNVSSSFSFPGWNNGRIV 840

Query: 841 CQQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTEL 900
           CQQSQLKQLL+   ASSSEII LNNSPLNLPEAK SRSGINNDKY D+DSKSS RTGTEL
Sbjct: 841 CQQSQLKQLLT---ASSSEIIALNNSPLNLPEAKISRSGINNDKYKDIDSKSSNRTGTEL 864

Query: 901 LTTTV 905
           LTTTV
Sbjct: 901 LTTTV 864

[Close]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match: A0A0A0LW62 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045740 PE=3 SV=1)

HSP 1 Score: 1617.4 bits (4187), Expect = 0.0e+00
Identity = 816/904 (90.27%), Postives = 833/904 (92.15%), Query Frame = 0 

Query: 1   MALSPYLSVPNRFKTSTTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWSSSSDAGKCRA 60
           MALSPY SVPN  +T +TFQKRYLECQQLPFLSKLSNFSVRRRFFSDDW  SSD GK RA
Sbjct: 1   MALSPYFSVPNPLRTPSTFQKRYLECQQLPFLSKLSNFSVRRRFFSDDWRLSSDVGKVRA 60

Query: 61  KPKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120
           K KDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK
Sbjct: 61  KAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFK 120

Query: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVI 180
           EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTI+ISLLGREGLLEKCSEIFDEMASQGVI
Sbjct: 121 EFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVI 180

Query: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240
           RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG
Sbjct: 181 RSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLG 240

Query: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300
           LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG
Sbjct: 241 LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFG 300

Query: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNAS 360
           KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAK GSIKEAMDVFKQMQAAGCVPNAS
Sbjct: 301 KLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAS 360

Query: 361 TYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
           TYSILLNLYGKHGRYDDVRELFL+MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 421 VEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALY 480
           V+E IDPNMETYEGLVFACGKGGLHEDAKKIL HMN KG+VPSS+AYSGLIEAYG AALY
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480

Query: 481 DEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
           DEALVAFNTMNEVGSKST+DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540

Query: 541 IEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGI 600
           IEGYRQSGQ+EEAIKAFVEMEKMRCE DEQTLE VLGVYCFAGLVDESKEQF EIKASGI
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600

Query: 601 LPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDD 660
           LPSVLCYCMMLAVYAKNG                                       WDD
Sbjct: 601 LPSVLCYCMMLAVYAKNGR--------------------------------------WDD 660

Query: 661 AYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLL 720
           A ELLDEM+K RVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCG GMRFYNTLL
Sbjct: 661 ASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLL 720

Query: 721 EALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMN 780
           EALWWLGQKGRAARVLTEATKRGLFPEL+R+SKLVWSVDVHRMWEGGAYTA+SLWVNKMN
Sbjct: 721 EALWWLGQKGRAARVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAVSLWVNKMN 780

Query: 781 EMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVC 840
           EML+DGEDLPQLA VVVGG LEKDSTA+NLPIARAVYSFLQDNVSSSF FPGWNN RI+C
Sbjct: 781 EMLMDGEDLPQLAAVVVGGSLEKDSTARNLPIARAVYSFLQDNVSSSFSFPGWNNSRIIC 840

Query: 841 QQSQLKQLLSEAEASSSEIITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELL 900
           QQSQLKQLL+   ASSSEII LNNSP NLPEAK SRSGINNDKY DVDSKSS RTGTELL
Sbjct: 841 QQSQLKQLLT---ASSSEIIALNNSPFNLPEAKISRSGINNDKYKDVDSKSSNRTGTELL 863

Query: 901 TTTV 905
           TTTV
Sbjct: 901 TTTV 863

[Close]
BLAST of CaUC01G013610 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 1209.1 bits (3127), Expect = 0.0e+00
Identity = 614/890 (68.99%), Postives = 713/890 (80.11%), Query Frame = 0 

Query: 29  LPFLSKLSNFSVRRRF---------FSDDWSSSSDAGKCRAKPKDLVLGNPSVIVEKGKY 88
           L FL + S+F   RRF            +    S +GK +AK KDLVLGNPSV VEKGKY
Sbjct: 13  LSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGKIKAKTKDLVLGNPSVSVEKGKY 72

Query: 89  SYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQ 148
           SYDVE+LINKLSSLPPRGSIARCLDIFKN+LSLNDF+LVFKEFA RGDWQRSLRLFKYMQ
Sbjct: 73  SYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQ 132

Query: 149 RQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQY 208
           RQIWCKPNEHIYTIMISLLGREGLL+KC E+FDEM SQGV RSVFSYTALINAYGRNG+Y
Sbjct: 133 RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY 192

Query: 209 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 268
           ETSLELL+RMK E++SP+ILTYNTVINACARG LDWEGLLGLFAEMRHEG+QPD+VTYNT
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252

Query: 269 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 328
           LLSACA RGLGDEAEMVF+TM +GGIVP++TTYS++VETFGKL +LEKV  LL EM S G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312

Query: 329 YLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVR 388
            LPDI+SYNVL+EA+AKSGSIKEAM VF QMQAAGC PNA+TYS+LLNL+G+ GRYDDVR
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372

Query: 389 ELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFAC 448
           +LFLEMK S+ +PDA TYNILI VFGEGGYFKEVVTLFHD+VEE I+P+METYEG++FAC
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432

Query: 449 GKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTV 508
           GKGGLHEDA+KIL +M    +VPSS+AY+G+IEA+G AALY+EALVAFNTM+EVGS  ++
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492

Query: 509 DTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVE 568
           +T++SL+++FARGGL KE EAILSR+ + GI RN  +F+  IE Y+Q G+FEEA+K +V+
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552

Query: 569 MEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYAKNGS 628
           MEK RC+PDE+TLEAVL VY FA LVDE +EQF E+KAS ILPS++CYCMMLAVY K   
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612

Query: 629 WYNCTGYLSRILQALEVGRPNYLIVLVPWPLDYAIKFWWDDAYELLDEMVKNRVSSIHQV 688
                                                 WDD  ELL+EM+ NRVS+IHQV
Sbjct: 613 --------------------------------------WDDVNELLEEMLSNRVSNIHQV 672

Query: 689 IGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEA 748
           IGQMIKGDYDDDSNWQ+VEYV DKLN+EGCGLG+RFYN LL+ALWWLGQK RAARVL EA
Sbjct: 673 IGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEA 732

Query: 749 TKRGLFPELYRKSKLVWSVDVHRMWEGGAYTAISLWVNKMNEMLLDGEDLPQLATVV-VG 808
           TKRGLFPEL+RK+KLVWSVDVHRM EGG YTA+S+W+N +N+MLL G DLPQLA VV V 
Sbjct: 733 TKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQLAVVVSVR 792

Query: 809 GWLEKDSTAQNLPIARAVYSFLQDNVSSSFLFPGWNNGRIVCQQSQLKQLLSEAEASSSE 868
           G LEK S A+  PIA+A +SFLQD+VSSSF F GWN GRI+CQ+SQLKQLLS  E +S E
Sbjct: 793 GQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTKEPTSEE 852

Query: 869 -----IITLNNSPLNLPEAKTSRSGINNDKYNDVDSKSSERTGTELLTTT 904
                ++ L NSP+     + S S   N   N    ++  RT  EL  +T
Sbjct: 853 SENKNLVALANSPIFAAGTRASTSSDTNHSGNPTQRRT--RTKKELAGST 861

[Close]
BLAST of CaUC01G013610 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-76
Identity = 192/747 (25.70%), Postives = 353/747 (47.26%), Query Frame = 0 

Query: 113 NDFSLVFKEFAARGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLEKCSEIF 172
           +D + + +E   R +  +++  +++ ++R+        + + MIS LGR G +     IF
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256

Query: 173 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 232
           +   + G   +V++++ALI+AYGR+G +E ++ +   MK   + PN++TYN VI+AC +G
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG 316

Query: 233 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 292
            ++++ +   F EM+  GVQPD +T+N+LL+ C+  GL + A  +F  M    I  ++ +
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 293 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQ 352
           Y+ +++   K G+++    +L +M  +  +P++ SY+ +I+  AK+G   EA+++F +M+
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 353 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFK 412
             G   +  +Y+ LL++Y K GR ++  ++  EM     + D  TYN L+  +G+ G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 413 EVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLI 472
           EV  +F ++  E + PN+ TY  L+    KGGL+++A +I       G+      YS LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 473 EAYGLAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYG-- 532
           +A     L   A+   + M + G    V TYNS+I  F R        A + R  +Y   
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR-------SATMDRSADYSNG 616

Query: 533 ----ISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLV 592
                S +A S     EG R    F +            CE   Q L  +L V+      
Sbjct: 617 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF------ 676

Query: 593 DESKEQFHEIKASGILPSVLCYCMMLAVYAKNGSWYNCTGYLSRILQALEVGRPNYLIVL 652
                + H+++   I P+V+ +  +L   ++  S                          
Sbjct: 677 ----RKMHQLE---IKPNVVTFSAILNACSRCNS-------------------------- 736

Query: 653 VPWPLDYAIKFWWDDAYELLDEMVKNRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLN 712
                       ++DA  LL+E+ +   + ++ V+  ++ G    ++ W   + +FDK+N
Sbjct: 737 ------------FEDASMLLEEL-RLFDNKVYGVVHGLLMG--QRENVWLQAQSLFDKVN 796

Query: 713 AEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELYRKSKLVWSVDVHRMWE 772
                    FYN L + LW  GQK  A  V  E   R ++  ++  S L    D+H M  
Sbjct: 797 EMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCL----DLHLMSS 856

Query: 773 GGAYTAISLWVNKMNEMLLDGEDLPQLATVVVGGWLEKDSTAQNLPIARAVYSFLQDNVS 832
           G A   +  W+  +  ++ +G +LP++ +++  GW +      +  + RAV   L+  + 
Sbjct: 857 GAARAMVHAWLLNIRSIVYEGHELPKVLSILT-GWGKHSKVVGDGALRRAVEVLLR-GMD 876

Query: 833 SSFLFPGWNNGRIVCQQSQLKQLLSEA 853
           + F     N GR     S +   L E+
Sbjct: 917 APFHLSKCNMGRFTSSGSVVATWLRES 876

[Close]
BLAST of CaUC01G013610 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-74
Identity = 156/548 (28.47%), Postives = 273/548 (49.82%), Query Frame = 0 

Query: 86  LINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYM---QRQI 145
           L+N +   P  G ++R  D  K+ L   D   + K     G W+R++ LF+++       
Sbjct: 111 LVNSIVEQPLTG-LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSG 170

Query: 146 WCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETS 205
             K +  +  I + +LGRE      +++ D++  Q  +  V +YT +++AY R G+YE +
Sbjct: 171 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 230

Query: 206 LELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLS 265
           ++L ERMK    SP ++TYN +++   +    W  +LG+  EMR +G++ D  T +T+LS
Sbjct: 231 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 290

Query: 266 ACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP 325
           ACA  GL  EA+  F  +   G  P   TY+ +++ FGK G   +   +LKEME      
Sbjct: 291 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 350

Query: 326 DISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELF 385
           D  +YN L+ A+ ++G  KEA  V + M   G +PNA TY+ +++ YGK G+ D+  +LF
Sbjct: 351 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 410

Query: 386 LEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKG 445
             MKE+   P+  TYN ++ + G+     E++ +  D+      PN  T+  ++  CG  
Sbjct: 411 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 470

Query: 446 GLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTVDTY 505
           G+ +   ++   M   G  P    ++ LI AYG      +A   +  M   G  + V TY
Sbjct: 471 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 530

Query: 506 NSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEK 565
           N+L++  AR G ++  E ++S M+  G      S+S +++ Y + G +    +    +++
Sbjct: 531 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 590

Query: 566 MRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYCMMLAVYAKNGSWYN 625
            +  P    L  +L        +  S+  F   K  G  P ++ +  ML+++ +N  +  
Sbjct: 591 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 650

Query: 626 CTGYLSRI 631
             G L  I
Sbjct: 651 AEGILESI 657

[Close]
BLAST of CaUC01G013610 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-70
Identity = 132/499 (26.45%), Postives = 255/499 (51.10%), Query Frame = 0 

Query: 131 SLRLFKYM--QRQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTA 190
           +LR F +   Q+      +  +  I+IS+LG+EG +   + +F+ +   G    V+SYT+
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213

Query: 191 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE 250
           LI+A+  +G+Y  ++ + ++M+ +   P ++TYN ++N   +    W  +  L  +M+ +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273

Query: 251 GVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKV 310
           G+ PD  TYNTL++ C    L  EA  VF+ M   G   +  TY+ +++ +GK  + ++ 
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333

Query: 311 AMLLKEMESEGYLPDISSYNVLIEAHAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNL 370
             +L EM   G+ P I +YN LI A+A+ G + EAM++  QM   G  P+  TY+ LL+ 
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393

Query: 371 YGKHGRYDDVRELFLEMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPN 430
           + + G+ +    +F EM+ +  +P+  T+N  I+++G  G F E++ +F ++    + P+
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453

Query: 431 METYEGLVFACGKGGLHEDAKKILLHMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFN 490
           + T+  L+   G+ G+  +   +   M   G VP    ++ LI AY     +++A+  + 
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513

Query: 491 TMNEVGSKSTVDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG 550
            M + G    + TYN+++   ARGG++++ E +L+ M +     N  ++  ++  Y    
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573

Query: 551 QFEEAIKAFVEMEKMRCEPDEQTLEAVLGVYCFAGLVDESKEQFHEIKASGILPSVLCYC 610
           +         E+     EP    L+ ++ V     L+ E++  F E+K  G  P +    
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633

Query: 611 MMLAVYAKNGSWYNCTGYL 628
            M+++Y +        G L
Sbjct: 634 SMVSIYGRRQMVAKANGVL 652

[Close]
BLAST of CaUC01G013610 vs. TAIR 10
Match: AT2G41720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-67
Identity = 189/730 (25.89%), Postives = 340/730 (46.58%), Query Frame = 0 

Query: 74  VEKGKYSYD--VETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRS 133
           VE  ++  D  V  ++++L +L     +   L+ +  R +  +F ++ +E + RG  +  
Sbjct: 67  VENDRFQKDWSVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELC 126

Query: 134 LRLFKYMQ-RQIWCKPNEHIYTIMISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALI 193
           + +FK+M+ ++ +C  N+ IY +MI L  R   +++   +F EM          +Y ALI
Sbjct: 127 VNVFKWMKIQKNYCARND-IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALI 186

Query: 194 NAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGV 253
           NA+GR GQ+  ++ L++ M R  ++P+  TYN +INAC     +W   L +  +M   GV
Sbjct: 187 NAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG-NWREALEVCKKMTDNGV 246

Query: 254 QPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKL-------- 313
            PDLVT+N +LSA  +     +A   F+ M    + P+ TT++ I+    KL        
Sbjct: 247 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 306

Query: 314 -----------------------------GKLEKVAMLLKEMESEGYLPDISSYNVLIEA 373
                                        G++E    + + M +EG  P+I SYN L+ A
Sbjct: 307 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 366

Query: 374 HAKSGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLEMKESSAEPD 433
           +A  G    A+ V   ++  G +P+  +Y+ LLN YG+  +    +E+FL M++   +P+
Sbjct: 367 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 426

Query: 434 ATTYNILIRVFGEGGYFKEVVTLFHDLVEEKIDPNMETYEGLVFACGKGGLHEDAKKILL 493
             TYN LI  +G  G+  E V +F  + ++ I PN+ +   L+ AC +     +   +L 
Sbjct: 427 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 486

Query: 494 HMNEKGMVPSSRAYSGLIEAYGLAALYDEALVAFNTMNEVGSKSTVDTYNSLIHTFARGG 553
               +G+  ++ AY+  I +Y  AA  ++A+  + +M +   K+   T+  LI    R  
Sbjct: 487 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 546

Query: 554 LYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQFEEAIKAFVEMEKMRCEPDEQTLE 613
            Y E  + L  M +  I    + +S ++  Y + GQ  EA   F +M+   CEPD     
Sbjct: 547 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 606

Query: 614 AVLGVYCFAGLVDESKEQFHEIKASGILP-SVLCYCMMLAVYAKNGSWYNCTGYLSRILQ 673
           ++L  Y  +    ++ E F E++A+GI P S+ C  +M A        +N  G  S +  
Sbjct: 607 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA--------FNKGGQPSNVFV 666

Query: 674 ALEVGRPNYLIVLVPWPLDYAIKF----------WWDDAYELLDEMVKNRVSSIHQVIGQ 733
            +++ R   +      P   A+ F           W  A +L+ +M+   + S+   +  
Sbjct: 667 LMDLMREKEI------PFTGAVFFEIFSACNTLQEWKRAIDLI-QMMDPYLPSLSIGLTN 726

Query: 734 MIKGDYDDDSNWQMVEYVFDKLNAEGCGLGMRFYNTLLEALWWLGQKGRAARVLTEATKR 751
            +   +      + +  +F K+ A G G+ ++ Y  LLE L  +G   +   VL   +  
Sbjct: 727 QMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGA 779

The following BLAST results are available for this feature:
BLAST of CaUC01G013610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894204.10.0e+0092.70pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 ... [more]
XP_038894203.10.0e+0092.60pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 ... [more]
XP_008437858.10.0e+0090.82PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic ... [more]
TYJ99127.10.0e+0090.81pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
KAA0055197.10.0e+0090.81pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
BLAST of CaUC01G013610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7Q20.0e+0068.99Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9SIC92.9e-7525.70Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
O646242.1e-7328.47Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
B8Y6I05.7e-7129.51Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q9LYZ91.8e-6926.45Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
BLAST of CaUC01G013610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AVM10.0e+0090.82pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X2 ... [more]
A0A5D3BJ340.0e+0090.81Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UKU10.0e+0090.81Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AUM40.0e+0090.72pentatricopeptide repeat-containing protein At1g74850, chloroplastic isoform X1 ... [more]
A0A0A0LW620.0e+0090.27Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045740 PE=3 SV... [more]
BLAST of CaUC01G013610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G74850.10.0e+0068.99plastid transcriptionally active 2 [more]
AT2G31400.12.1e-7625.70genomes uncoupled 1 [more]
AT2G18940.11.5e-7428.47Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.11.3e-7026.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G41720.12.3e-6725.89Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 755..843
e-value: 6.5E-4
score: 29.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 94..230
e-value: 2.0E-36
score: 127.1
coord: 477..588
e-value: 1.6E-23
score: 85.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 590..785
e-value: 1.2E-10
score: 43.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 231..314
e-value: 2.4E-19
score: 71.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 315..463
e-value: 6.4E-37
score: 129.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 574..600
e-value: 0.7
score: 10.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 255..287
e-value: 1.4E-7
score: 29.2
coord: 536..569
e-value: 7.7E-7
score: 26.9
coord: 361..394
e-value: 4.3E-8
score: 30.8
coord: 150..180
e-value: 4.1E-6
score: 24.6
coord: 501..533
e-value: 8.0E-6
score: 23.7
coord: 184..218
e-value: 1.3E-8
score: 32.5
coord: 396..428
e-value: 4.6E-6
score: 24.5
coord: 220..253
e-value: 4.1E-4
score: 18.3
coord: 291..324
e-value: 2.7E-5
score: 22.1
coord: 326..359
e-value: 1.4E-10
score: 38.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 322..367
e-value: 5.9E-14
score: 52.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 489..542
e-value: 5.3E-5
score: 23.2
coord: 373..406
e-value: 0.0068
score: 16.5
coord: 416..475
e-value: 3.3E-5
score: 23.9
coord: 170..228
e-value: 1.5E-15
score: 57.0
coord: 241..301
e-value: 2.0E-13
score: 50.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 533..567
score: 11.191545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 10.621557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 13.372844
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 12.58363
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..602
score: 9.404853
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 10.172144
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..252
score: 11.279235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 12.33152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 10.128299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 10.259834
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 253..287
score: 12.58363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..885
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..904
NoneNo IPR availablePANTHERPTHR47937PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEINcoord: 33..630
coord: 653..865
NoneNo IPR availablePANTHERPTHR47937:SF1PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEINcoord: 33..630
coord: 653..865

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G013610.1CaUC01G013610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding