CaUC01G012830 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G012830
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCytochrome f
LocationCiama_Chr01: 25438012 .. 25444105 (-)
RNA-Seq ExpressionCaUC01G012830
SyntenyCaUC01G012830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCGTTTTTTTATTTTTTTTATTTTTTTGGCAATAGTTTTACTTTGGTTTTACGCACCAATGGAGATTCTGTTTCAGAAATTCATTTCATATATAATATATATTAGTTAATATACTTAATTTCATATATTCTGTTTTAGAAATTAATTTATATTATGTTATGTTCTCTAAATTGGTTCTACTTTAGATATTTCATAGATATATTGTATTTCAAAAAATTAATATTAATTCTATTATACTTTCTTTTGGTGTCAACAACACCATATTCTATTGATTCTATTTTACTCCCAATTGTGTTGTTTTAAATAGTGAGTTTTGTTTGATATATTTTTTATTTAAGTTGTTTAATAATATATGTAGTCCGATTTACTTTTGTTTTGAAAGATATGACTTCAACCCATCTTAATTCCATTCCTGGTGTTGCTCATGGGGAGAAAGCTGAAAAATTTGGTGGTGTCAATTTCAAAAGTTGGTAACAAAGAATGTTGTTCTATCTCACCACCCTGAATTTGGCAAAATTTCTCAAAGAGGATGCTCCCACTTTGTCTAAGGGAGAAATTGACAAAGAAAAGCAACTTGTCGTTGATGTATGGAAGCACGCAGAATATCTTTGCAAGAATTTACATTTTGAATGGATTGGACAACACACTGTACAATGTGTACAGTGGTGTTGATGCAACAAAAAAATCTTTAAAGTTGCTGGTGCAAAGAAATTCATTGTTGGCAAATTTTTGGATTACAAAATGCTGGATTCGAAAACAATGATCAGTCAGGTTCAATAACTCCAAGTAATTCTACATGAAATACATGCTGAGAATATGACCTTGAGTTAATCGTTTCAGGTAGCAGCAATAATTGAAAAATTGTCACCCTCATGGAGAGATTTGAAAAATTATCTCAAACACAAACACAAGGAGATAAAACTTGAGAAATTTGTGATTCGCCTTGGAATTGAAGAGAACAACAGAAAAGCAAAAAACAGTTCTATGGTGCTATAGACCCCAAAGCCAATATTGTGGAAAATAGACCATAAAGTAACAAGAAAATAAAGGTTTCTGGTGAAAGTTCAAGTCATAGACAACTATCCACAAGAAAGTTTAATGGGAAATGCTTCAATTGCAATAAAATGGGACATCAATCTAAGGATTGTCATAAGCCAAAGAATTTTCAGCGCAAAAATTCCGAAGCTTATATCATAGAAGTTGATGTAGTATCAGATGGTGTTGCAAATATAGACCTTCATGCAGTCATTTAAGAATGCAATATGGTTGGAAATTCTAAGGAATGGTGGGTAGACACTGGCGCTACTCGTCATATTTGTGCCAACAAAAATATGTTCACATCCTATGTACCCGTTTCTGGCGGAGAACAATTATTTATGGGCAACTCTTCTACTTCAAAGGTTGAAGGACAAGGCAAAGTGGTTCTTAAAATGACTTCTGACAAGGAACTCACTCTTAACATTGTACTTCATGTTCTTGATATACGCAAGAATTTAGTTTCTGGTTCATTACTTAGCAAGAATGGCTTCAAGTTGGTTTTTGTATCTGATAAGTTTGTAGTTTCCAAGAATGATATGTATGTTGGAAATGGTTATTTGAGTGATTGTTTGTTTAAGTTAAATGTACTCACTATTGTACCCAAAAGTATTACTAATAATAAAGTATCTACTTTTACTTATATTGTTGAGTCATTTGTTTGGCATGTTAGATTAGGACATGTCAATTTCAATTCTTTGTGTAGGCTAATTAATATGAATTTGATTCCAAAATTCAATTTTGATGCAAATCATAAATGTGAGGTGTATGTGGAATAAAAAATGACTAAAGCATCTTTTCATTCAACTGATAGAATTACGAGACCTTTAGAGTTAATTCACAGTGATATTTGTGACTTGACATTTGTGCAAACTAGAGGTGATAAAAAGTATTTCATTACTTTTATAGATGATTTCATAAAATATTGCTATGTTTATCTGCTAAGAAGCAAAGATGAGGCAACTGAAATATTTAAGCTTTATAAAAATGAAGTTGAGAATCAATTGAGTACAAGGATTAAATTTATAAGAAATGATAGAGGTGGTGAATATGATCCTCCTTTTGAACAATTTTGTATACAATATGACATTATTCACCAAACTACTGCTCCTTATTCCCCTCAATCAAATGGAGTTGTGGAACGTAAAAATCGAACACTTAAAGAAATGATGAATGTGATGCTCATAAGTTCAGGTTTACCACAAAACTTGTGGGGAGAAGCTTTAATAACGGCAAATTACCTATTAAATAGAATATCTCATAAAAAGTCACAAAACATTCCATGTGAAGAATGGAAAGGACGAAATCCTTCATACAAATATTTAAAAGTATGCAGATGCCTAGCAAAGGTTGCAGTACCTAAACCAAAATTAGTCAAAATAGGACCGAAAATTATTGATTGTATATTCATTGGTTATACTATCAATAGTTGTGCATATCGATTTTTAGCCTATAAATAAGATATTTTACATATACATGTTAACACAATCATTAAATCAAGGGATGCCATCTTCTTTGAAAATATTTTTTCACATAACATGTCATGTGAAGCAAGTTTACAAAAACATTTTCGAGATACTATAACGAGCGAAACTCAAAATGAATCAAACGTTGAGTTAAATAAGGAAGAGAAACTCAGACGAAGTAAAAGAATGAGGATCTCAAAATCATTTGGGCTTGATTTTTTAACAGATTTGTTAAAAAACGAACCTCAAACATTTAAAGAGGCTATGTCTACTTCAAAAGCTCCATATTGGAAAGAAGCTGTGAATAGTGAAATTGAGTCCATCATGCATAACCACACTTGGAAATTAGTTGAGATCTTCCATTAGAAAGTAAACCACTTGGATGTAAGTGGATTTTTAAATGGAAAATGAAAACCGATGGATCAATAGACAAATATAAGGTGAGACTTGTAGATAAAGGTTACAAGTAACAAGAAGGACTTGATTATTTTGATACTTACTCGCCAGTTTCTAAAATTACTTCCATCGCATGCTCATTGCAAAATCAGCTTTGCATGGCTTGAGATACATCAGATGGATGTAAAGACAACCTTTTTAAATGGTGAGTTAGAAGAAGAGATCTACATGCAACAACCCGAAGGATTTGTTTCCCCTGATCAAGAAACAAAAGTTTTCAAACTAATAAGGTCTCTGATAAGCACTTGAAAAGTGCTTTCTATTCTCTCAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGATTTTCAGGTTAAAACGAGGAAAATAAGAAGAAAAGACTAAAAGATCAAAACCGAGCAAGAATACGGCGAAAAAGAGCTGAAAAACTCAAAAGGGAAAATTTTGGGATAGCGTCGCGGCGCTAAAACCTAAACGCATCGTTATGGACGCATAGTAGCACCGCGGCGCCAAAATTCGACGCAACTTGTTGAACGCGACAGCGTCGCGGCGCTAATGCCCGATAACAATATTTATGAACGCATCACAGCGTCGCGGTGCTTGGACGGCGCTGCCGCAGCGCTAAAACCCGAGAGCAACAATTTTGGATGCAGCCCTAGCGCCACGGCGCCAGTTTTCCTTAAATGAAAATGTGTTATTTTTTGTAAGTTTTTGGGCGGCCAAACTCTATAAATTTGGGGGTTTCCAGCAGTCCAAATCATCAAAAGAAAATCAAAATCAAATCAAGGAAGTTACAGATCTAAAGAGGCACAAAAAGAAGAGAATTAAGTGAGAGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGAAAAGAGTTCGAGATAGTTGTGGTGCCCTTCGAATTCCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGCCTCTTTTCAGTAGAGTTTCACTTTCTTTACACTATTTCTTTGTTTATTTTGCTTAAACATGTTGCTTCAAGCTATGAGTGGCTAAACTCGGTAGTTTTAGGGTTTTGATGATTTGTTTATGAATTTATGTTGATCTTGTAGACTTTCATGGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAACTCTTGTGGATTGACCATCCTCACATGTTAGGTTAGATGTATGATTGAGAGATTGTATGTTTAACTTGATCTATAACAATGAATTGTTGTTAATCTATCACGAGAGTAGTTAGGTTGACAATAAAAGTTGCTAAAGACTATTCTTAATACCATGTAATTTTGTATTGGTTTTAAGAGATTAATAATCAATCGAGTTGCATGAGAAAGGGTTGTTTTTTAGAGAAAATAACTTGGAATTAAGTTTCTAGACTTAGGCATATGAATTACAATAAAATCCATGAAATCTATAATATTGCATGATGAAATAAACAAGGATTCATTACCCTAGAACTCTTTTTGACTCTTGTGTTTCTCACTTTAATACTTTCCTTATTATTTGTATTTTCCATAACTCATATTATTCAATTTCAATCCTCAAATAAAATTGATTCAACTCTAGAATAGCTAAGTAACTTAAACCTTCACAATTGGATCTCCAGTGGAACGATATTCGGACTTAACCGTCTTATATTATAACTTGACCCGTACACTTGTGGTTAACACTCAAAGTGCGCATCAGTCTCTTTATGGATTAAAACAAGCACTAAAACAATGGCATGAGAAATTTGATAATGCAATGTTGGCGAATGGGTTTCAAATTAATGGATGCGACAAATACGTATATGTCAAAAGTAATAAGAATGATCATGTCATTGTTGTTTGTATGTTGATGATATGCTAATTATAGGTAGCAATATCAATATTATTAGGGCTACTAAACAAATGCTAGCCAATAAATTTGAGATGAAAGGTATGGGTGTCACAGATGTTATTCTAGGAATTAAAATTTCTAGAACCCTACAAGGGTTAGTATTGTCTCAATCGCATTACATTGATAAAATTCTTGAAAAATTCAAAAAACATAACATTGGGATAACAAAGACCCTTATAGATACCAGTCTCCATTTAGCTAACAATAATGGAGATAGAATATTCTCGCATAACTAGCTGTTTGATGTACATCATGAGTTGTACACGTCCAGATATAGCATATGTTTTAAGCAAGCTAAGTCGTTATACGAGCAATTCAGGTCAAGATCATTGGAAAGTTATATTGAGACTTTTGGGATACCTAAAGCACACTAAAAATTATGGCTTACACTATACTAGATATCCTACTGTACTTGAAAGCTATAGTGATGCTAATTGGATATCTGGTACTAAAGACTCCAAATCGACGAATGGTTATATCTTCACTCTTGGAGGTGGGGCTGTGTCTTGGAAATCTTCCAAACAAACGTGTATGACACGATCCACAATGGAATCTGAGTTTATAGATTTAGACAAGGCTGGAGAAGAAGCAGAATGACTTCAAAAATTTTTGGAAGATATTCCAAACTGGTCTAAGCTAGTGCCTGCAATATGTATACATAATGATAGCCAAGCAGCTATTGGAAGGGCACAAAATATTATGTATAATGGTAAGTCTCGACATATACGACAGAAATGCAATACAATCAGACAACTACTTTCAAATGAAATTATCACTATTGACTTTGTGAGATCAAAGGATAATATTGCGGATCCACATACTTTAGTATTCTTTTCACTCTAGTCACATGATTAACTTTGAGATTGGATTGAAAACGAGCACACACCCCCACAATATAACGTATGTGTTGGCGACTTGCCGTGAGATACAACAAGCTACCAATCATACTTTGGTATCCTATTCTTTCCCCAGACCTTGCGACTAAGAAAGATGTTCACTTCTTAAAATATCCCATATACGTAGGCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACCGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATATTATCCCTCCAGGACCAGAACTTCTTGTTTCAGAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAAT

mRNA sequence

ATGATTCCATACAACAAGCTACCAATCATACTTTGGTATCCTATTCTTTCCCCAGACCTTGCGACTAAGAAAGATGTTCACTTCTTAAAATATCCCATATACGTAGGCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACCGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATATTATCCCTCCAGGACCAGAACTTCTTGTTTCAGAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAAT

Coding sequence (CDS)

ATGATTCCATACAACAAGCTACCAATCATACTTTGGTATCCTATTCTTTCCCCAGACCTTGCGACTAAGAAAGATGTTCACTTCTTAAAATATCCCATATACGTAGGCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACCGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATATTATCCCTCCAGGACCAGAACTTCTTGTTTCAGAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAAT

Protein sequence

MIPYNKLPIILWYPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Homology
[Close]
BLAST of CaUC01G012830 vs. NCBI nr
Match: YP_009326002.1 (cytochrome f [Citrullus lanatus] >YP_009348044.1 cytochrome f [Citrullus mucosospermus] >YP_009420807.1 cytochrome f [Citrullus colocynthis] >YP_009431570.1 cytochrome f [Citrullus amarus] >YP_009431655.1 cytochrome f [Citrullus rehmii] >APW82474.1 cytochrome f [Citrullus lanatus subsp. vulgaris] >QZL38606.1 cytochrome f [Citrullus naudinianus] >QZL38694.1 cytochrome f [Citrullus ecirrhosus] >APD52493.1 cytochrome f [Citrullus lanatus] >APW82559.1 cytochrome f [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. NCBI nr
Match: YP_009752003.1 (cytochrome f [Cionosicys macranthus] >QIT05244.1 cytochrome f [Cionosicys macranthus])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. NCBI nr
Match: YP_004841796.1 (cytochrome f [Cucumis melo subsp. melo] >YP_009004057.1 cytochrome f [Cucumis hystrix] >YP_009346497.1 cytochrome f [Cucumis x hytivus] >YP_009860086.1 cytochrome f [Cucumis melo subsp. agrestis] >Q2QD76.1 RecName: Full=Cytochrome f; Flags: Precursor [Cucumis sativus] >ALF03314.1 cytochrome f [Cucumis sativus var. hardwickii] >AOX48831.1 cytochrome f [Coccinia grandis] >ASY96625.1 cytochrome f [Cucumis melo var. conomon] >ASY96713.1 cytochrome f [Cucumis melo var. makuwa] >ASY96800.1 cytochrome f [Cucumis melo var. momordica] >ASY96887.1 cytochrome f [Cucumis melo var. dudaim] >ASY96974.1 cytochrome f [Cucumis melo var. cantalupo] >ASY97148.1 cytochrome f [Cucumis melo var. inodorus] >ASY97322.1 cytochrome f [Cucumis melo var. flexuosus] >AVE15344.1 PetA [Cucumis sativus var. sativus] >QJF46396.1 cytochrome f [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. NCBI nr
Match: YP_010131107.1 (cytochrome f [Benincasa hispida] >QPZ75754.1 cytochrome f [Benincasa hispida] >QSQ72323.1 cytochrome f [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. NCBI nr
Match: QOP39842.1 (cytochrome f [Carya hunanensis])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 101/105 (96.19%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 172 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 231

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDA++GRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 232 GGYEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 276

[Close]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match: Q2QD76 (Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.4e-53
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match: Q09X04 (Cytochrome f OS=Morus indica OX=248361 GN=petA PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.2e-52
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNAT+AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATSAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDA++GRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match: Q0ZJ07 (Cytochrome f OS=Vitis vinifera OX=29760 GN=petA PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.2e-51
Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITI DA++GRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match: Q3C1I8 (Cytochrome f OS=Nicotiana sylvestris OX=4096 GN=petA PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-50
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITI DA++GRQVVDIIPPGPELLVSEGESIK DQPLTSNPN
Sbjct: 223 GGYEITITDASDGRQVVDIIPPGPELLVSEGESIKFDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match: P06449 (Cytochrome f OS=Nicotiana tabacum OX=4097 GN=petA PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-50
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT AGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITI DA++GRQVVDIIPPGPELLVSEGESIK DQPLTSNPN
Sbjct: 223 GGYEITITDASDGRQVVDIIPPGPELLVSEGESIKFDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match: A0A1P8LE85 (Cytochrome f OS=Citrullus mucosospermus OX=519315 GN=petA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match: A0A1P8LEF8 (Cytochrome f OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=petA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match: A0A343A8C3 (Cytochrome f OS=Citrullus lanatus OX=3654 GN=petA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match: A0A249RXC8 (Cytochrome f OS=Citrullus rehmii OX=260675 GN=petA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match: A0A249RX39 (Cytochrome f OS=Citrullus amarus OX=1567104 GN=petA PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PILSPD ATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK
Sbjct: 163 FPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 267

[Close]
BLAST of CaUC01G012830 vs. TAIR 10
Match: ATCG00540.1 (photosynthetic electron transfer A )

HSP 1 Score: 190.7 bits (483), Expect = 6.8e-49
Identity = 91/105 (86.67%), Postives = 98/105 (93.33%), Query Frame = 0 

Query: 13  YPILSPDLATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEK 72
           +PIL+PD AT KDVHFLKYPIYVGGNRGRGQIYPDGSKSNN VYNAT  GI+SKI+RKEK
Sbjct: 163 FPILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGIISKILRKEK 222

Query: 73  GGYEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPN 118
           GGYEITIVDA+NGR+V+DIIP G ELLVSEGESIKLDQPLTSNPN
Sbjct: 223 GGYEITIVDASNGREVIDIIPRGLELLVSEGESIKLDQPLTSNPN 267

The following BLAST results are available for this feature:
BLAST of CaUC01G012830 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009326002.16.9e-5198.10cytochrome f [Citrullus lanatus] >YP_009348044.1 cytochrome f [Citrullus mucosos... [more]
YP_009752003.12.6e-5097.14cytochrome f [Cionosicys macranthus] >QIT05244.1 cytochrome f [Cionosicys macran... [more]
YP_004841796.12.6e-5097.14cytochrome f [Cucumis melo subsp. melo] >YP_009004057.1 cytochrome f [Cucumis hy... [more]
YP_010131107.12.6e-5097.14cytochrome f [Benincasa hispida] >QPZ75754.1 cytochrome f [Benincasa hispida] >Q... [more]
QOP39842.15.8e-5096.19cytochrome f [Carya hunanensis][more]
BLAST of CaUC01G012830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QD763.4e-5397.14Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1[more]
Q09X042.2e-5295.24Cytochrome f OS=Morus indica OX=248361 GN=petA PE=3 SV=1[more]
Q0ZJ074.2e-5193.33Cytochrome f OS=Vitis vinifera OX=29760 GN=petA PE=3 SV=1[more]
Q3C1I81.2e-5092.38Cytochrome f OS=Nicotiana sylvestris OX=4096 GN=petA PE=3 SV=1[more]
P064491.2e-5092.38Cytochrome f OS=Nicotiana tabacum OX=4097 GN=petA PE=3 SV=1[more]
BLAST of CaUC01G012830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1P8LE853.3e-5198.10Cytochrome f OS=Citrullus mucosospermus OX=519315 GN=petA PE=3 SV=1[more]
A0A1P8LEF83.3e-5198.10Cytochrome f OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=petA PE=3 SV=1[more]
A0A343A8C33.3e-5198.10Cytochrome f OS=Citrullus lanatus OX=3654 GN=petA PE=3 SV=1[more]
A0A249RXC83.3e-5198.10Cytochrome f OS=Citrullus rehmii OX=260675 GN=petA PE=3 SV=1[more]
A0A249RX393.3e-5198.10Cytochrome f OS=Citrullus amarus OX=1567104 GN=petA PE=3 SV=1[more]
BLAST of CaUC01G012830 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00540.16.8e-4986.67photosynthetic electron transfer A [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002325Cytochrome fPFAMPF01333Apocytochr_F_Ccoord: 52..117
e-value: 1.7E-18
score: 66.8
IPR002325Cytochrome fPROSITEPS51010CYTFcoord: 13..117
score: 36.067062
IPR024094Cytochrome f large domainPFAMPF16639Apocytochr_F_Ncoord: 12..40
e-value: 7.6E-8
score: 32.8
NoneNo IPR availableGENE3D2.40.50.100coord: 56..114
e-value: 2.8E-27
score: 96.5
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 12..117
NoneNo IPR availablePANTHERPTHR33288:SF9CYTOCHROME Fcoord: 12..117
IPR036826Cytochrome f large domain superfamilySUPERFAMILY49441Cytochrome f, large domaincoord: 11..53
IPR011054Rudiment single hybrid motifSUPERFAMILY51246Rudiment single hybrid motifcoord: 53..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G012830.1CaUC01G012830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031361 integral component of thylakoid membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding