CaUC01G012510 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G012510
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LEA_2 domain-containing protein
Location	Ciama_Chr01: 24450159 .. 24452606 (-)
RNA-Seq Expression	CaUC01G012510
Synteny	CaUC01G012510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACACTACTACAGAAGGAGAAGCATCATCATCATCAAAACAAAGCTCCAGTGTGCAACAACATGGGACAGCAAAGCGCACAAGGCTCTTGAGAATCACAGGAAGAAGCTTATTGGGTGTAATGATCCTTGTTGGTCTTGCAATTATTATATGTTGGCTTATTGTCTTCCCCAAAACCCCACATCTCATTGTGGAATCTGGCCAAGTCACACCTCAAAGTTTAACTGATAGAAAGCTCAAAGCCACCATAGCTTTCACTGTCAAAAGCTATAACCCTAACAAAAGAGCCTCCGTTCATATGGATTCTATGAGGATGATAGTCACTGATATGGGCCAGACGTTTTCGTCTTCCATCCCCAACTTCATCCAGCCGCCCGCGAACCAGACCGTCTTGACCTCGGCCGTCCAAGGCAGCTTCATATACCCATTTGGGCACATGAAGGAATTGGTGTTGATGGAGGGAATAAATCCGGAGCTTCGCTTCTCGGCTAAAGTCAGGTACAAATATTTTACTTTTAACACAAATATATATAAAGTACGAATGTCGTTTGGTTTTGTTGATGTGAAAATCTTTATATATATATTTACTTTAAATTTATATTTAAAAAATTATTATAAATGAAAAAAATATCAAACTATTTATAAATATAGAAAAATTTATATTAGAGCGATAGAAGTTGAAATTTTTCTATATTTGTAAATAGTTTGGCTCATTTTGTTATATTTGAAAATAACTCTTTATATTAATTTGTTGAATTTACATAAACTACTCATAAGATAACTATTTTATATTTTTTGTTTTTAGATTCTTAAAGAATAAATTTGTTGGATTTATATTTTGAGTTGGGAATTTAAAGAATAAATTTGTCGAATTTACCTAAATTACTAACGGGATAACCATTTTATTTTTTGTTTTTAAATTTTTAATGAGTAAATTTGTCAAATTTATATTTTGGGTTGGGGGTTGAAAGAATAAATATAAAATTATATTTTGAGTTATTGCGAGTTCAAAGAGGAAATTACTAACATAGTAACTGTTTTATCTTTTGTTTTTAGATTTTGAAAGAAAAAAAGTTTGACGGATTTATATTTTGGTTGGGAGTTCAAAGAATTAAGTATAAAATTATATTTGGGATTAGTAGGAGTTCGAAGAATGAATTAAGGCTCTGAAATTTGAAAATAAAAGATTAAAATAAAAACAGAGTTCTATTTCATGTTTTTAGATATGTGTTTGGTGGCAGAATTTAGAAATTAAATTCTAATTTAAACAATTGCAAACTAGTTGTAGTTCCCTATAAACTATCAATTGACAATAAACTATTATTAATTTATTTATGAACATGGTTTTATGTTAAAAAAATTGTATAATTACTATTTTGTAATATTACATCGGGATGTTTTCAAAAATAGAAAAGTTGTTGAAAATAACTACAAATATAGCAAAATTTTACTTTCTATCTGTGACAGACCGCGATAGACCTAGATAGACATCTATTACTTTACTAAATAAACTATGGATAGATGTCTATCACAATCTATCACACATAAAGTAAAATTTTGCTATATTTGTAAATAGTTTGATATTTTTTTTATTTATAATAATTTTCCTATTTTATATATAACCTATGGGATAAACTGAACTTTTTGTCACTATGGTTAATTTGGAAGAATTTAAAATTTAGGTTTTATGGTTTATAATTAGAATTTAACTCTTAAGGTTTGATAAAAGCTTCATAAATAATCCCTATGGTAAGGATTATTTAAGAGTATGACAATATATGAAGTTGTATCAAACCAACGAAACTAAGTTCTAAATTTTAATACCATATGAAGTACTTGTAACTTTATCTCAACCATATAGACCAAATTTGAAATATAACCTAATTTATTATAATTACATAATACATATTTTAATTTAAAAAATTGAATTGAGTTTTTAACATGACATATTATTTTATTTCTAAATGTTTTTGTTTTAATTTAATATAATTCTACCTTTTAAATTTTAAAATTCAAATTCTGGATACAATAAAAACATAAAAATATTATTTTCAGAATTTACATGGTTTAAATCACAGAATCTAGGAACAGTTTTCAAGACAGAGTTCAAGTTGTCTGTCAAACACATATTCGCTAACTCTGGAAATCTAAAAACATAAAATAAAATCTGGATTGCAAACCAAACATGCCCTTAATTTCTTTCTTTTTTGTTATCTACTTTGTAAGAGTGTTTTCAAAATCTAAGCCATTTTTTTACACTAAAAAATAGTAGGTTTTGAAATTTTGTCTCACTCTAAAAATTTCTAGCTCTATTCCTATCAGTTATACTTACAAGAGATGGACGTCGAAACTTCGGTCACTGGAGGTCTATTGTAATCACCTCAGGCTTAAGATCAATGGTTCTACACCTTTTGATAATACCAAATGCAAAGTGGATCTTTGA

mRNA sequence

ATGGGGAACACTACTACAGAAGGAGAAGCATCATCATCATCAAAACAAAGCTCCAGTGTGCAACAACATGGGACAGCAAAGCGCACAAGGCTCTTGAGAATCACAGGAAGAAGCTTATTGGGTGTAATGATCCTTGTTGGTCTTGCAATTATTATATGTTGGCTTATTGTCTTCCCCAAAACCCCACATCTCATTGTGGAATCTGGCCAAGTCACACCTCAAAGTTTAACTGATAGAAAGCTCAAAGCCACCATAGCTTTCACTGTCAAAAGCTATAACCCTAACAAAAGAGCCTCCGTTCATATGGATTCTATGAGGATGATAGTCACTGATATGGGCCAGACGTTTTCGTCTTCCATCCCCAACTTCATCCAGCCGCCCGCGAACCAGACCGTCTTGACCTCGGCCGTCCAAGGCAGCTTCATATACCCATTTGGGCACATGAAGGAATTGGTGTTGATGGAGGGAATAAATCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTATACTTACAAGAGATGGACGTCGAAACTTCGGTCACTGGAGGTCTATTGTAATCACCTCAGGCTTAAGATCAATGGTTCTACACCTTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Coding sequence (CDS)

ATGGGGAACACTACTACAGAAGGAGAAGCATCATCATCATCAAAACAAAGCTCCAGTGTGCAACAACATGGGACAGCAAAGCGCACAAGGCTCTTGAGAATCACAGGAAGAAGCTTATTGGGTGTAATGATCCTTGTTGGTCTTGCAATTATTATATGTTGGCTTATTGTCTTCCCCAAAACCCCACATCTCATTGTGGAATCTGGCCAAGTCACACCTCAAAGTTTAACTGATAGAAAGCTCAAAGCCACCATAGCTTTCACTGTCAAAAGCTATAACCCTAACAAAAGAGCCTCCGTTCATATGGATTCTATGAGGATGATAGTCACTGATATGGGCCAGACGTTTTCGTCTTCCATCCCCAACTTCATCCAGCCGCCCGCGAACCAGACCGTCTTGACCTCGGCCGTCCAAGGCAGCTTCATATACCCATTTGGGCACATGAAGGAATTGGTGTTGATGGAGGGAATAAATCCGGAGCTTCGCTTCTCGGCTAAAGTCAGTTATACTTACAAGAGATGGACGTCGAAACTTCGGTCACTGGAGGTCTATTGTAATCACCTCAGGCTTAAGATCAATGGTTCTACACCTTTTGATAATACCAAATGCAAAGTGGATCTTTGA

Protein sequence

MGNTTTEGEASSSSKQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSSIPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKINGSTPFDNTKCKVDL

Homology

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BLAST of CaUC01G012510 vs. NCBI nr
Match: XP_038895440.1 (uncharacterized protein LOC120083674 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 4.4e-85
Identity = 164/207 (79.23%), Postives = 180/207 (86.96%), Query Frame = 0


Query: 1   MGNTTTEGEASSSSKQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPK 60
           M  TT +GEASSSSK+SS VQ+HGTAKRT+LLRITGRSLLG+MILVG+ IIICWLIVFPK
Sbjct: 1   MRGTTIQGEASSSSKESSYVQEHGTAKRTKLLRITGRSLLGIMILVGIGIIICWLIVFPK 60

Query: 61  TPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSSI 120
           TP+L VESGQV P  LTDRKL+ATIAFTVKSYNPNKRA++HMDSM MIVTDMGQTF+S I
Sbjct: 61  TPNLTVESGQVIPHRLTDRKLQATIAFTVKSYNPNKRATIHMDSMMMIVTDMGQTFASVI 120

Query: 121 PNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLRS 180
           PNF QPP NQTV TSA+QG+FIYPFGHMKE V  EGI+P+LRFSAKVSY  KRWTSK R 
Sbjct: 121 PNFTQPPGNQTVWTSAIQGNFIYPFGHMKEFVKAEGISPDLRFSAKVSYIMKRWTSKARI 180

Query: 181 LEVYCNHLRLKINGSTPFDNTKCKVDL 208
           LE+YC  LRLK N STPFDN KC VDL
Sbjct: 181 LEIYCGGLRLKFNDSTPFDNKKCTVDL 207

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BLAST of CaUC01G012510 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 9.2e-75
Identity = 144/211 (68.25%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 4   TTTEGEASSSS-------KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLI 63
           + T+GEASSS+       K SS   QHGTAKRT+L+RI GRSLL VM LVGLAI+ICWL+
Sbjct: 3   SNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLV 62

Query: 64  VFPKTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTF 123
           VFPKTP+LI+E+G VTP SLTDRKL A+I+FT+KSYNPNKRAS+HMDSM+M + DMGQTF
Sbjct: 63  VFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTF 122

Query: 124 SSSIPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTS 183
           +++IP F QPP NQT L   V+ +FIYPFG MK+L+L +G+NPEL FSA VSY  ++W S
Sbjct: 123 TTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWAS 182

Query: 184 KLRSLEVYCNHLRLKINGSTPFDNTKCKVDL 208
           K RSLE+YC+ +RLKINGSTPFDNTKCKVDL
Sbjct: 183 KRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

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BLAST of CaUC01G012510 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 protein YLS9-like [Cucumis melo var. makuwa] >TYK08768.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74
Identity = 149/208 (71.63%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MGNTTTEGEASSSS-KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFP 60
           M +  T+GE SSSS K+ S V++HG AKRTR+LRITGR+LLG+MILV +A+IICWLIVFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSS 120
           + P LIVE+G+V P SLTDRKL ATIAFTV SYNPNK+AS+ MDSMRMIVTDMG +F S 
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLR 180
           IP+F QPP N+TVL S +QG+FIYPFGHMKELV +EGI+P+LRFSAKVSY  +RWTS+ R
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 SLEVYCNHLRLKINGSTPFDNTKCKVDL 208
            LEVYC+ LRLK N ST FDN KCKVDL
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

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BLAST of CaUC01G012510 vs. NCBI nr
Match: XP_004139454.1 (uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical protein Csa_022755 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-74
Identity = 145/198 (73.23%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 10  ASSSSKQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESG 69
           +SSSSK+ S V +HGTAKRTR+LRITGR+LLG+MILV +A+IICWLIVFP+ P +IVE+G
Sbjct: 15  SSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETG 74

Query: 70  QVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSSIPNFIQPPAN 129
           QV P SLTDRKL ATIAFTV SYNPNK+AS+ MDSMRMIV+DMG +F S IP+F QPP N
Sbjct: 75  QVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKN 134

Query: 130 QTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLRSLEVYCNHLR 189
           +TVLTS +QG+FIYPFGHMKEL+ +EGI+PELRFSAKVSY  +RWTS+ R +EVYC+ LR
Sbjct: 135 KTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLR 194

Query: 190 LKINGSTPFDNTKCKVDL 208
           LK N ST FDN KCKVDL
Sbjct: 195 LKFNDSTVFDNKKCKVDL 212

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BLAST of CaUC01G012510 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 2.7e-74
Identity = 145/209 (69.38%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 6   TEGEASSSS-------KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVF 65
           T+GEASSSS       K S   QQHGTAKRT+L+RI GRSLL VM LVGLAI+ICWL+VF
Sbjct: 5   TQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PKTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSS 125
           PKTP+LI+E+G VTP SLTDRKL A+I+FT+KSYNPNKRAS+HMDSM+M + DMGQTF +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124

Query: 126 SIPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKL 185
           +IP F Q P NQT LT  V+ +FIYPFG MK+L+L  G+NPEL FSA VSY  ++W SK 
Sbjct: 125 TIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RSLEVYCNHLRLKINGSTPFDNTKCKVDL 208
           RSLE+YC+ +RLKINGSTPFDNTKCKVDL
Sbjct: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

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BLAST of CaUC01G012510 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 39  LLGVMILVGLAIIICWLIVFPKTPHLIVESGQVTPQSL--TDRKLKATIAFTVKSYNPNK 98
           LLG  +LVGLAI+I +L + PK     VE+  V   ++   D  + A  ++ +KSYNP K
Sbjct: 46  LLG--LLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEK 105

Query: 99  RASVHMDSMRMIVTDMGQTFS-SSIPNFIQPPANQT-VLTSAVQGSFIYPFGHMKELVLM 158
             SV   SMR+      Q+ +  +I  F Q P N+T + T  V  +      + ++L   
Sbjct: 106 HVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAE 165

Query: 159 EG---INPELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKINGST--PFDNTKCKVDL 208
           +    I  E+  +A+VSY    + S+ R+L+  C  + + +  S+   F    CK  L
Sbjct: 166 KSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

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BLAST of CaUC01G012510 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-08
Identity = 55/198 (27.78%), Postives = 91/198 (45.96%), Query Frame = 0


Query: 23  HGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESGQVT--PQSLTDRK 82
           HG      LL +  + ++ +++++G+A +I WLIV P+     V    +T    +  D  
Sbjct: 29  HGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI 88

Query: 83  LKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSS-SIPNFIQPPANQTVLTSAVQG 142
           L+  +A TV   NPNKR  ++ D +       G+ FS+ ++  F Q   N TVLT   QG
Sbjct: 89  LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQG 148

Query: 143 SFIYPFGHMKELVL----MEGI-NPELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKI-- 202
             +  F   +   L    + G+ N E++F  +V +       +    +V C+ LRL +  
Sbjct: 149 QNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLST 208

Query: 203 -NGSTPFDNT---KCKVD 207
            NG+T        KC  D
Sbjct: 209 SNGTTTTSTVFPIKCDFD 226

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BLAST of CaUC01G012510 vs. ExPASy TrEMBL
Match: A0A5D3CC54 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00190 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.6e-75
Identity = 149/208 (71.63%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MGNTTTEGEASSSS-KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFP 60
           M +  T+GE SSSS K+ S V++HG AKRTR+LRITGR+LLG+MILV +A+IICWLIVFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSS 120
           + P LIVE+G+V P SLTDRKL ATIAFTV SYNPNK+AS+ MDSMRMIVTDMG +F S 
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLR 180
           IP+F QPP N+TVL S +QG+FIYPFGHMKELV +EGI+P+LRFSAKVSY  +RWTS+ R
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 SLEVYCNHLRLKINGSTPFDNTKCKVDL 208
            LEVYC+ LRLK N ST FDN KCKVDL
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of CaUC01G012510 vs. ExPASy TrEMBL
Match: A0A1S3CGQ5 (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.6e-75
Identity = 149/208 (71.63%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MGNTTTEGEASSSS-KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFP 60
           M +  T+GE SSSS K+ S V++HG AKRTR+LRITGR+LLG+MILV +A+IICWLIVFP
Sbjct: 1   MRSIATQGEPSSSSAKEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFP 60

Query: 61  KTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSS 120
           + P LIVE+G+V P SLTDRKL ATIAFTV SYNPNK+AS+ MDSMRMIVTDMG +F S 
Sbjct: 61  RNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWSD 120

Query: 121 IPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLR 180
           IP+F QPP N+TVL S +QG+FIYPFGHMKELV +EGI+P+LRFSAKVSY  +RWTS+ R
Sbjct: 121 IPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRGR 180

Query: 181 SLEVYCNHLRLKINGSTPFDNTKCKVDL 208
            LEVYC+ LRLK N ST FDN KCKVDL
Sbjct: 181 LLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of CaUC01G012510 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.9e-75
Identity = 145/198 (73.23%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 10  ASSSSKQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESG 69
           +SSSSK+ S V +HGTAKRTR+LRITGR+LLG+MILV +A+IICWLIVFP+ P +IVE+G
Sbjct: 15  SSSSSKEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETG 74

Query: 70  QVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSSIPNFIQPPAN 129
           QV P SLTDRKL ATIAFTV SYNPNK+AS+ MDSMRMIV+DMG +F S IP+F QPP N
Sbjct: 75  QVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKN 134

Query: 130 QTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKLRSLEVYCNHLR 189
           +TVLTS +QG+FIYPFGHMKEL+ +EGI+PELRFSAKVSY  +RWTS+ R +EVYC+ LR
Sbjct: 135 KTVLTSTIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLR 194

Query: 190 LKINGSTPFDNTKCKVDL 208
           LK N ST FDN KCKVDL
Sbjct: 195 LKFNDSTVFDNKKCKVDL 212

[Close]

BLAST of CaUC01G012510 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 145/209 (69.38%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 6   TEGEASSSS-------KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVF 65
           T+GEASSSS       K S   QQHGTAKRT+L+RI GRSLL VM LVGLAI+ICWL+VF
Sbjct: 5   TQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PKTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSS 125
           PKTP+LI+E+G VTP SLTDRKL A+I+FT+KSYNPNKRAS+HMDSM+M + DMGQTF +
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124

Query: 126 SIPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTSKL 185
           +IP F Q P NQT LT  V+ +FIYPFG MK+L+L  G+NPEL FSA VSY  ++W SK 
Sbjct: 125 TIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKR 184

Query: 186 RSLEVYCNHLRLKINGSTPFDNTKCKVDL 208
           RSLE+YC+ +RLKINGSTPFDNTKCKVDL
Sbjct: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of CaUC01G012510 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 144/211 (68.25%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 4   TTTEGEASSSS-------KQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLI 63
           + T+ EASSS+       K SS  QQHGTAKRT+L+RI GRSLL VM LVGLAI+ICWL+
Sbjct: 3   SNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLV 62

Query: 64  VFPKTPHLIVESGQVTPQSLTDRKLKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTF 123
           VFPKTP+LI+E+G VTP SLTDRKL A+I+FT+KSYNPNKRAS+HMDSM+M + DMGQTF
Sbjct: 63  VFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTF 122

Query: 124 SSSIPNFIQPPANQTVLTSAVQGSFIYPFGHMKELVLMEGINPELRFSAKVSYTYKRWTS 183
            ++IP F QPP NQT L   V+ +FIYPFG MK+L+L +G+NPEL FSA VSY  ++W S
Sbjct: 123 ITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWAS 182

Query: 184 KLRSLEVYCNHLRLKINGSTPFDNTKCKVDL 208
           K RSLE+YC+ +RLKINGSTPFDNTKCKVDL
Sbjct: 183 KRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of CaUC01G012510 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-10
Identity = 44/175 (25.14%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 39  LLGVMILVGLAIIICWLIVFPKTPHLIVESGQVTPQSLT-DRKLKATIAFTVKSYNPNKR 98
           +L ++ +  +  +I WL   PK     VE+  V   +LT D  + AT  FT++S+NPN R
Sbjct: 33  ILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHR 92

Query: 99  ASVHMDSMRMIVTDMGQTFS-SSIPNFIQPPAN-QTVLTSAVQGSFIYPFGHMKELVLME 158
            SV+  S+ + V    QT +  ++  F QP  N + +  + +  +      + K+L    
Sbjct: 93  ISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQN 152

Query: 159 GINP---ELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKINGSTPFDNTKCKVDL 208
            +     E+   A+V +    W S  R+ ++ C+H+ + ++      N+ C  D+
Sbjct: 153 SLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNSSCDADI 207

[Close]

BLAST of CaUC01G012510 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 61.6 bits (148), Expect = 8.5e-10
Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 39  LLGVMILVGLAIIICWLIVFPKTPHLIVESGQVTPQSL--TDRKLKATIAFTVKSYNPNK 98
           LLG  +LVGLAI+I +L + PK     VE+  V   ++   D  + A  ++ +KSYNP K
Sbjct: 46  LLG--LLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEK 105

Query: 99  RASVHMDSMRMIVTDMGQTFS-SSIPNFIQPPANQT-VLTSAVQGSFIYPFGHMKELVLM 158
             SV   SMR+      Q+ +  +I  F Q P N+T + T  V  +      + ++L   
Sbjct: 106 HVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAE 165

Query: 159 EG---INPELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKINGST--PFDNTKCKVDL 208
           +    I  E+  +A+VSY    + S+ R+L+  C  + + +  S+   F    CK  L
Sbjct: 166 KSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CaUC01G012510 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-09
Identity = 55/198 (27.78%), Postives = 91/198 (45.96%), Query Frame = 0


Query: 23  HGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESGQVT--PQSLTDRK 82
           HG      LL +  + ++ +++++G+A +I WLIV P+     V    +T    +  D  
Sbjct: 29  HGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI 88

Query: 83  LKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSS-SIPNFIQPPANQTVLTSAVQG 142
           L+  +A TV   NPNKR  ++ D +       G+ FS+ ++  F Q   N TVLT   QG
Sbjct: 89  LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQG 148

Query: 143 SFIYPFGHMKELVL----MEGI-NPELRFSAKVSYTYKRWTSKLRSLEVYCNHLRLKI-- 202
             +  F   +   L    + G+ N E++F  +V +       +    +V C+ LRL +  
Sbjct: 149 QNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLST 208

Query: 203 -NGSTPFDNT---KCKVD 207
            NG+T        KC  D
Sbjct: 209 SNGTTTTSTVFPIKCDFD 226

[Close]

BLAST of CaUC01G012510 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 37/135 (27.41%), Postives = 62/135 (45.93%), Query Frame = 0


Query: 10  ASSSSKQSSSVQQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESG 69
           A S+S    S  + G        R    ++  +++++G+  +I WL+  P  P L V   
Sbjct: 19  APSASSTPESYSKEGGGGGGDARRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGA 78

Query: 70  QVTPQSLTDRKLKAT-IAFTVKSYNPNKRASVHMDSMRMIVTDMGQTFSSSIPNFIQPPA 129
            +   + T   L +T + F+V + NPN+R S+H D + M VT   Q  +  +P    PP 
Sbjct: 79  AIYDLNFTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLP---LPPL 138

Query: 130 ----NQTVLTSAVQG 140
                 TV+ + V G
Sbjct: 139 RLGHKSTVVIAPVMG 150

[Close]

BLAST of CaUC01G012510 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 32/127 (25.20%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 21  QQHGTAKRTRLLRITGRSLLGVMILVGLAIIICWLIVFPKTPHLIVESGQVTPQSLTDRK 80
           + HG ++R +L+R    S++ V+ ++ L I++ W I+ P  P  I++   V   +++   
Sbjct: 5   ENHGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 64

Query: 81  ---LKATIAFTVKSYNPNKRASVHMDSMRMIVTDMGQ--TFSSSIPNFIQPPANQTVLTS 140
              L +    T+ S NPN +  ++ D + +  T   Q  TF +SIP   Q   +  + + 
Sbjct: 65  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSP 124

Query: 141 AVQGSFI 143
            V G+ +
Sbjct: 125 FVYGTSV 130

The following BLAST results are available for this feature:

BLAST of CaUC01G012510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895440.1	4.4e-85	79.23	uncharacterized protein LOC120083674 [Benincasa hispida]	[more]
XP_023520091.1	9.2e-75	68.25	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]
XP_008462326.1	1.6e-74	71.63	PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 pro...	[more]
XP_004139454.1	2.1e-74	73.23	uncharacterized protein LOC101218532 [Cucumis sativus] >KGN64868.1 hypothetical ...	[more]
XP_022970341.1	2.7e-74	69.38	uncharacterized protein At1g08160-like [Cucurbita maxima]	[more]

BLAST of CaUC01G012510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	1.2e-08	30.34	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	4.5e-08	27.78	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of CaUC01G012510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CC54	7.6e-75	71.63	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00...	[more]
A0A1S3CGQ5	7.6e-75	71.63	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]
A0A0A0LSV0	9.9e-75	73.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]
A0A6J1I0B9	1.3e-74	69.38	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]
A0A6J1HJ52	2.2e-74	68.25	uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of CaUC01G012510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	2.9e-10	25.14	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	8.5e-10	30.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	3.2e-09	27.78	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	2.2e-05	27.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	1.8e-04	25.20	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 88..176 e-value: 9.2E-6 score: 26.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 21..206
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G012510.1	CaUC01G012510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane