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CaUC01G012470 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGAAAAAAGGTTTTGGCGTAACATCCAAACGCGGGTTGTTCCTAATTGAATCAAAGGGCCGGAATCCCACTTGACCTACCATGGCTCAATCGTGACCGTGAAATTAAAATCCATTTCACTCATCACTTTCCTTTCATATTCAGATATTTGGAAGAAGAAATTGTGATTTGGAGAGAAATAGGAACAATAATGAAGGCATGGTTGTAAAATCCATCCCCCAAAATTTTCTCTTCCATTAGGAACCAAACAAATTAGAAAAAGCAAGCAAGCAAGAATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGGTTTCTTCTTCTTCTTCTTCCATTTCTATTCCTTTCTACGTCCGAATCGAAAAATTATTCAATGAAATCGGTACATTTGGAGGGTATAGTGCTCCATTCTTTCATTTTGTATAGTTTTACCAATGTGGAGGAAATTTTAATTTAGGAATAGAATATATCTATTAATATGTTGATATATATCCGTAAATCGTAGTGTTCAACATACCTTGAGAATTAATCGATAACTCCGATTTTTTTTATTATTATTTTTTATGTTTATAAATACCCATAAAACAGGAAGAAATAACACCTCCTGATCTCAATGTAGAGATATGCACTAATACAAAAATCCATATCTATGATTTCAATGTTGGGTAATTGATTATATTAAAAAAAGAATTAAGAATTTTAAAGGTTTGTCTTCTCTTCAATAGGTTGGTAGTTGTACTTTCTTGGTGGGTTTCCTCTTCTTCTTTCCTCAAAATTTTGTACCATTTTTTGTTTTTTGTTTTTTGTTTTTTTTCTCTTTTTTTAAAAAGTGGAGTTGTGCAAATGTCATGGTACCATTTGGATACAAGTTTAAAATATGTATATCACAATGGATTAAGTTTTTGAAGTATACATGTTTTAAAACTATTTTATTCAATATATAAAATTATCAGCCACATTATGGTAGAGTATAAAAAAGGTATTTATTTTTGATTTTACACAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAATTATTCAATTTCTACCTAATTCTCTTCTCATTTTTCTAATCATTATTTTTTTATTCAATTTCTATCAAATAAAATAATGTCTTCTTTAACTAGTTGAATTAGGCTTGAATTAATAAAATTTTAGCATCTTTTTAGGTTATTTAGTGTTCTTTCTAATTTTCACTAAATTATTAAATTATGCTGTTAAATTATGAAATAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTACAAAAAGTTGTGTAATTATAATAATTTGACATTCTCTCAATCAATGGGGAACTGTGTAGTTTATTTTAGAAATATTTTGGGTTATTTTCCAGTTTTTCTCCTCAATTTTTCAAAAAAGTTTTAATTTTATTTTTTATGTATGTAAAGAAAATATGTTAATTTGATATTCATAAAATGGTTATAATAATGTTAAAACATAGTTTCTTAATTGAGTTGAAAACACTCTCATCTATATATGTTTATATTTTAATATTGATGAAATAGACATGTCTACCCACGAAATCGAAATTTACCTACTTTTATATATGTGACCTAATATTGGAGGTGTAACTTACCTAACCCACGAATGCCTCTATATTTTATGAAAACAATACCCTTTGAAAAAAAGTATTCTACCCTTTAAATTAACAAGAGAAATTATCTTAAATGACAAAACTACTAAAAATATTTACAATTAATAGCAAAATACACAGTCTATTAACGATAGATTGTGATAATAGATAGTGAAATTTTACTATATTTATAAATATTTTGGTTCCTTTTACTATATTTGAAAAGAGTCCAATTAACAATATTTTGTTTCTTAACTAAAAAGATTTTTTCTCTTTTAATATGGAACAACAACACTTCAACATTGAATGAAAATAAAATATCAACACATGCAAAAGGAATAAATTTGAAACGGTATAAAATCAATGATATGAAATTGAAAAATAACACAAATATTAGAACCTAAGTTTGACACATTTTTTCCATGCATCTTGAAAAAAATTATACAATGTCTTCTCAAACATTGTGTAGCTAGATAATATAGTTATCCAACTAAGGGCCCTAAGAAAAAAATATTTAAAATACACAGATTTTGAAGTAGTCGTCGAACACTCTAATTTTTTTTAAATGATTTATTTTTTAAATTAAATAGTTGAAAATGTATTTTAAACACACCTTAAGTATTCTACAGAGCTTCTTATAAATTGAGCTTCATTTTTATATGTTTTGTGTGATTAAGTCAACTACTTTATTATGGGTGATTTAGGTCATCGCAATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAAGAAGAAGAAGAAGAAGAATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATTAACTTATTACATTTTTCATTTCATTTAATTAATTATATACCAACCTTTCTTTTTTCTATTTATATTTTAATGCAATAATAATTGTAATAATTCATTGCAGTGCACATGATCTCCACGTGTAATTATTAATTGATCTCACCATACACAATTATTATTTAACAAACCCCAG AAAAAAGAAAAAAGGTTTTGGCGTAACATCCAAACGCGGGTTGTTCCTAATTGAATCAAAGGGCCGGAATCCCACTTGACCTACCATGGCTCAATCGTGACCGTGAAATTAAAATCCATTTCACTCATCACTTTCCTTTCATATTCAGATATTTGGAAGAAGAAATTGTGATTTGGAGAGAAATAGGAACAATAATGAAGGCATGGTTGTAAAATCCATCCCCCAAAATTTTCTCTTCCATTAGGAACCAAACAAATTAGAAAAAGCAAGCAAGCAAGAATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTACAAAAAGTTGTGTCATCGCAATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAAGAAGAAGAAGAAGAAGAATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATTAACTTATTACATTTTTCATTTCATTTAATTAATTATATACCAACCTTTCTTTTTTCTATTTATATTTTAATGCAATAATAATTGTAATAATTCATTGCAGTGCACATGATCTCCACGTGTAATTATTAATTGATCTCACCATACACAATTATTATTTAACAAACCCCAG ATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTACAAAAAGTTGTGTCATCGCAATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAAGAAGAAGAAGAAGAAGAATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDPFRFCSLGCKVVQVVPLVCNVVLFIIFPSTKSCVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLRVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF Homology
BLAST of CaUC01G012470 vs. NCBI nr
Match: XP_038895394.1 (uncharacterized protein LOC120083632 isoform X1 [Benincasa hispida]) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93 Identity = 191/240 (79.58%), Postives = 195/240 (81.25%), Query Frame = 0
BLAST of CaUC01G012470 vs. NCBI nr
Match: XP_023538148.1 (uncharacterized protein LOC111799005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87 Identity = 175/235 (74.47%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of CaUC01G012470 vs. NCBI nr
Match: XP_022938109.1 (uncharacterized protein LOC111444296 [Cucurbita moschata]) HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87 Identity = 174/235 (74.04%), Postives = 185/235 (78.72%), Query Frame = 0
BLAST of CaUC01G012470 vs. NCBI nr
Match: XP_004139563.1 (uncharacterized protein LOC101204359 [Cucumis sativus] >KGN64871.1 hypothetical protein Csa_022811 [Cucumis sativus]) HSP 1 Score: 332.8 bits (852), Expect = 2.4e-87 Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
BLAST of CaUC01G012470 vs. NCBI nr
Match: XP_022969532.1 (uncharacterized protein LOC111468520 [Cucurbita maxima]) HSP 1 Score: 331.3 bits (848), Expect = 7.0e-87 Identity = 175/235 (74.47%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy TrEMBL
Match: A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 9.0e-88 Identity = 174/235 (74.04%), Postives = 185/235 (78.72%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy TrEMBL
Match: A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87 Identity = 182/241 (75.52%), Postives = 189/241 (78.42%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy TrEMBL
Match: A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.4e-87 Identity = 175/235 (74.47%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy TrEMBL
Match: A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.4e-85 Identity = 180/242 (74.38%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of CaUC01G012470 vs. ExPASy TrEMBL
Match: A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.6e-79 Identity = 168/237 (70.89%), Postives = 180/237 (75.95%), Query Frame = 0
BLAST of CaUC01G012470 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein ) HSP 1 Score: 214.9 bits (546), Expect = 6.9e-56 Identity = 126/241 (52.28%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of CaUC01G012470 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-40 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0
BLAST of CaUC01G012470 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-40 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0
BLAST of CaUC01G012470 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39 Identity = 101/238 (42.44%), Postives = 129/238 (54.20%), Query Frame = 0
BLAST of CaUC01G012470 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein ) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-39 Identity = 107/254 (42.13%), Postives = 132/254 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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