CaUC01G012160 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGTATTAGGTGCAATGTGTGGCATCCAAGAGAGTTGAGATATTTTTTCCAGAAAAAAGAGGTCAAATTCCTAAGCTACAACAACTTGAAGGTTGATATTTCCGCCTATAATATGACAACGTGGACAATTAGCAAATATGACAGTCCACAGGTAGCGCCACATCAACCTCTATCCCGTCACCCGTAATTCTCACGTAACTGCCATCACCGTCTGATCTACATCTTGGCCACGCCGATTACAACACGTGGATTTATACCGTGACAACTCGTGCAGTGACGGTTCGTTTTAAGTATCTTCCGATAACAGCCGGGTAAGAATTAGCGGTTTTAGTCACAGTCACCGTTTATTATCTTCTACTACGGAAAACTGCAGCATTCTCCTCACTCGAGCTTCAGGAACCTTGGGAGTGTGGAGGGGTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTGTCGTTGGCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGGTGTGTTGTTCTGTTTATTATTATTATTATTATTATTATTATTTCTGTTTTTCGTCTTTTTTTTGTGTGAGTAATGGTGAATTCTAGTTGTTGGTTAGTTTGTCTCGAATGCTTCGTTGTGATTGAGATTAATATGCTTTCTCGATTTGAATTTTCTGGTAATTGTAATTTGATGGAACTTGGAGAATGTGAAATGATATTGGAGAAACTTTAATTTTGACTGATTTCTTGCTTTGTTAAGAAAACCTGACGAATTTGCATAATGCTTTTGAGGTATGGAGCTTAGTACATTTGATGATTCATGCTATTGTTTAATTGCTTCTGAGTTTTCTGTAATATTTTGATATGCAGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGGTAGTTTTAATTTTTGGAAATTTCCCACAACCTATTGGCAAAATGTGGCTTATTGTGTCTGTTTTTGCATGCAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTATCATTTCATTTCTCATGTTTATTTGAGGGATTTCTCCACTATAGTTATGTTCTTATCTTGTTAGCCCGTTTGCAAGTATTTCTGGTTATCTAACATCCGAATATTGCCCCACGAAACCTTTCCTCTGAAGTTGTTCAGTTCTGTCCAGGATTTTACATCAAATTGTTGACTTGAATCGTCAAGTTTTCACTTTTCACTATGACTTGTATGATTTTTTTGTCTGTTCCCCATCAAGAATTAAATTGGGAAAGCATATGTTATTTCACCCACAATTTGTTTTGAATGTCGAATTGTGAACTTGAAAGTTAAGACAGATGGCACATGTTGCTTATTGCTATACAAGTCAATCCTTTACCATTTAGGTCATATTTACTACTCCGTAATCAAAATTATTGCAATCGTAATGGATTTTCTTTATTATTCGTAATTCACATAATATTGTTAACAGGTTTTTTTTTTGTAAATGTATTTAAATGGGCCCCACTTTTCGTATTACGATCGATTGATTACATTTATTGGGAAGTAAACATGGCCTTATCTCAATTCCTGATCAGGATGAATGCAACCTTTAGTGCTTATAATGTGTGTGAATTGAAGCTCATATGATTTTTTTGTTGTCCCCTCAGACACCTTTATCTATATTATCAATGAACTGTATGATTGATTTAAATGGCCTAACCTTGGATACATAATCATCAACACTCATAATAGAAATTACTTCTTGATGCAGGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTATGTTTGAAATTTCTTGTTATTCCTGTCAGCAAGTCGTCTAATTCCCATTCCTTGCCACTACCATTGCTTATCCTGTTTGAGAAAGATTGCTCAATTGTCTTATCTTTTGTGTTTGTTGCATCTTCAGCTATGATTCTTTTTCAGGAAAGAAGAGAAAATTTAGCTTTTCTAGATTTTATATTTCTATTTAAATAACTCAAGTTTCTGTACTTGACTCTCTTTTCCTATACTTTTTTGCGAGATTAGTATTGATTTTTTTACATGTATTGATTTTCTTCTTCCAATTTTTTCAAAAGATAAAGGTTAAAATGTCATTTTGGTTCATATACTTAGCTTTTCATCCCATTTTAGTCCCTACACTTTCAATAAATCTTAAATAAGTCTTAAATTTAGTCTATGTACTTTTACTAAATCTTAAATTTATTCTATTTACTTTCAGTAAACAAATTTAGTCCTTCAAAGAGACACCATGTGAGTCAATTTTCAAAACTTTTAAAGGGAATATTAATATTGACTTTTTTAAAAAATAGATATCAATAATAATAAACGAACAGCTGGACTAAGTTTATTGTAAGCACGAGAACTAAATTTGGACATTTGAAAATATAGAGACTAAAATAGAACAAAACCAGTATGTAGACCAAGATGATATTTTAGCCACAATTATCTTTGATCCCAAGAAAAGACTAATTTCCTTTTCATAACAAATCGTTTTATAGGTGTGGATATTGCAGAATTTTGGTTTTTGTAATCTGAGGAAATTGGTCTGACTGAACTTGTAATAAGTTCAAGTATTTTAGAGAGATAAAATTTTCATATGTTCTAATTAGGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAGTATGCATTGACCTCCTCCTTTTATTTTATTTTATTTTATTTCCTTGCATTCCTTTTTTTTTTTTTCTTTGTCCAACATCTTTTTGCCTTTTCCATCAGTGTTCCTGATGACTTTATCTGTGCAATAATTTCATCAGAGTATTAAATGAAGTAGAAAACTCAACTTTATAAAAAATTTACATAAAGTAAGAGTTACTGTATTAATTCGTTGAAAAGCATGCTTAAACCTTTAAATTTTACAAGAGAGCATACACAGCCCAGGTTATATTAGCAAGAAGCATGAACTTAAGTTTACTGGTCAAAGATTTCATTTTCATGCATAGTGTTTATGCCTCAGTGAGCACTGACATAGGCCTTGGTTTGTCTCTTCGCTTTTGGTTCTTTTTTCTTGCTCATGAACGTCAGTGTCGGATTTGGCAAGAGGCATATGATGGGTAAAACTGTGCACTTTACGTCTTTACCAAAATAATTTTGCTTTCTCCTTTTCATAATTCTGACTTCAAATTAATGTTTCTGTGGCTTGCTTATTTCAATTGCCTGTTACTTTTACTAGTTTGTAGAGGGCATGAAATGGAAATATTCTGCACAAATGATGTCTCTAATCCTAAATCGCCCTTGTAGACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGGTTCAATAACAATTTTCTCCACTGTTTTCGTATCACATCATTTTTGTTCTTGCACCTGAATTTTGAAGTTTGTTTCTTTCTATTTATCAAATGCAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTAAGAGATATCCATTCCCCTCTTCTAATTTGAATTTGATGGTCGTCCTCTTCTCTCTTGAGCGTAAAATTATGAAATCTTTAATGAAGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGATTTTCCTGTGGATTCTGAAGTGCACTCATACAATTTTGGCTCATGATTGTATAAATATTACACAGCATAACCAAAACTTCAAAGACGTAAATGGATTATCATGCTCAAATGTTCAGTCTCTCTTCAACCCCTCTTTTCCTTTCATTTCTTTTTTTGCTTCTATATTTTGAATCCCAAGCTTGGATTATCCTTATGATCTTATTGTATTATAGTTGGTCATTCGAGCAAGCTGTAAATGTTGGGTTATTAACAGGAGATTAAATTATAAGTCTATTTCATAATCTTTC ATGGTGGGTATTAGGTGCAATGTGTGGCATCCAAGAGAGTTGAGATATTTTTTCCAGAAAAAAGAGGTCAAATTCCTAAGCTACAACAACTTGAAGGTTGATATTTCCGCCTATAATATGACAACGTGGACAATTAGCAAATATGACAGTCCACAGGTAGCGCCACATCAACCTCTATCCCGTCACCCCCGGGTAAGAATTAGCGGTTTTAGTCACAGTCACCGTTTATTATCTTCTACTACGGAAAACTGCAGCATTCTCCTCACTCGAGCTTCAGGAACCTTGGGAGTGTGGAGGGGTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTGTCGTTGGCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTATCATTTCATTTCTCATGTTTATTTGAGGGATTTCTCCACTATAGTTATGTTCTTATCTTGTTAGCCCGTTTGCAAGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTATGTTTGAAATTTCTTGTTATTCCTGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGGTTCAATAACAATTTTCTCCACTGTTTTCGTATCACATCATTTTTGTTCTTGCACCTGAATTTTGAAGTTTGTTTCTTTCTATTTATCAAATGCAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGATTTTCCTGTGGATTCTGAAGTGCACTCATACAATTTTGGCTCATGATTGTATAAATATTACACAGCATAACCAAAACTTCAAAGACGTAAATGGATTATCATGCTCAAATGTTCAGTCTCTCTTCAACCCCTCTTTTCCTTTCATTTCTTTTTTTGCTTCTATATTTTGAATCCCAAGCTTGGATTATCCTTATGATCTTATTGTATTATAGTTGGTCATTCGAGCAAGCTGTAAATGTTGGGTTATTAACAGGAGATTAAATTATAAGTCTATTTCATAATCTTTC ATGGTGGGTATTAGGTGCAATGTGTGGCATCCAAGAGAGTTGAGATATTTTTTCCAGAAAAAAGAGGTCAAATTCCTAAGCTACAACAACTTGAAGGTTGATATTTCCGCCTATAATATGACAACGTGGACAATTAGCAAATATGACAGTCCACAGGTAGCGCCACATCAACCTCTATCCCGTCACCCCCGGGTAAGAATTAGCGGTTTTAGTCACAGTCACCGTTTATTATCTTCTACTACGGAAAACTGCAGCATTCTCCTCACTCGAGCTTCAGGAACCTTGGGAGTGTGGAGGGGTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTGTCGTTGGCTCAATCCAGGGCGAAGAGTTTTTCGGTTCAGGAGTTGTTATTTGGTCCTCGCCGTAGACATCCATCGCCTATACTTCATGCATCGGTGGCTCAGAGCTTCCCGGAGCTTCGAAAATTTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACACAGTTGGTGACTTTATGACCAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACGGGATTTCCAGTAGTTGATGACAATTGGAAACTGGTATCATTTCATTTCTCATGTTTATTTGAGGGATTTCTCCACTATAGTTATGTTCTTATCTTGTTAGCCCGTTTGCAAGTTGGCGTAGTTTCTGACTATGACTTGTTAGCACTAGATTCCATCTCAGGTATGTTTGAAATTTCTTGTTATTCCTGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAGGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATGACCGATCTTGAGGATGTTGCTAGGTTCAATAACAATTTTCTCCACTGTTTTCGTATCACATCATTTTTGTTCTTGCACCTGAATTTTGAAGTTTGTTTCTTTCTATTTATCAAATGCAGATTATTGCTTCAGACGAAGTATCGCCGACTTCCCGTGGTCGATGCTGATGGAAAGCTGGTTGGAATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGA MVGIRCNVWHPRELRYFFQKKEVKFLSYNNLKVDISAYNMTTWTISKYDSPQVAPHQPLSRHPRVRISGFSHSHRLLSSTTENCSILLTRASGTLGVWRGFDLFRQGSRMESIGCSLSSLSLAQSRAKSFSVQELLFGPRRRHPSPILHASVAQSFPELRKFTSLAASGTLMANSVPSRSGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVVDDNWKLVSFHFSCLFEGFLHYSYVLILLARLQVGVVSDYDLLALDSISGMFEISCYSCGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMTPAPLVVREMTDLEDVARFNNNFLHCFRITSFLFLHLNFEVCFFLFIKCRLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENRT Homology
BLAST of CaUC01G012160 vs. NCBI nr
Match: XP_038895655.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 392.1 bits (1006), Expect = 5.8e-105 Identity = 224/302 (74.17%), Postives = 228/302 (75.50%), Query Frame = 0
BLAST of CaUC01G012160 vs. NCBI nr
Match: KAA0040923.1 (CBS domain-containing protein CBSX1 [Cucumis melo var. makuwa]) HSP 1 Score: 388.7 bits (997), Expect = 6.4e-104 Identity = 230/326 (70.55%), Postives = 239/326 (73.31%), Query Frame = 0
BLAST of CaUC01G012160 vs. NCBI nr
Match: XP_004139474.1 (CBS domain-containing protein CBSX1, chloroplastic [Cucumis sativus] >KGN64903.1 hypothetical protein Csa_022852 [Cucumis sativus]) HSP 1 Score: 382.9 bits (982), Expect = 3.5e-102 Identity = 219/301 (72.76%), Postives = 224/301 (74.42%), Query Frame = 0
BLAST of CaUC01G012160 vs. NCBI nr
Match: XP_008461810.1 (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 382.5 bits (981), Expect = 4.6e-102 Identity = 220/301 (73.09%), Postives = 224/301 (74.42%), Query Frame = 0
BLAST of CaUC01G012160 vs. NCBI nr
Match: XP_022986137.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 365.9 bits (938), Expect = 4.5e-97 Identity = 208/306 (67.97%), Postives = 221/306 (72.22%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2) HSP 1 Score: 257.3 bits (656), Expect = 2.9e-67 Identity = 154/289 (53.29%), Postives = 177/289 (61.25%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 9.2e-61 Identity = 130/238 (54.62%), Postives = 156/238 (65.55%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy TrEMBL
Match: A0A5A7TCS5 (CBS domain-containing protein CBSX1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00370 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104 Identity = 230/326 (70.55%), Postives = 239/326 (73.31%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy TrEMBL
Match: A0A0A0LSY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G152500 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102 Identity = 219/301 (72.76%), Postives = 224/301 (74.42%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy TrEMBL
Match: A0A1S3CFF0 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500318 PE=4 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 2.2e-102 Identity = 220/301 (73.09%), Postives = 224/301 (74.42%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy TrEMBL
Match: A0A6J1J6R2 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483973 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97 Identity = 208/306 (67.97%), Postives = 221/306 (72.22%), Query Frame = 0
BLAST of CaUC01G012160 vs. ExPASy TrEMBL
Match: A0A6J1G8L0 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451845 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 2.6e-95 Identity = 210/308 (68.18%), Postives = 219/308 (71.10%), Query Frame = 0
BLAST of CaUC01G012160 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 257.3 bits (656), Expect = 2.1e-68 Identity = 154/289 (53.29%), Postives = 177/289 (61.25%), Query Frame = 0
BLAST of CaUC01G012160 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 235.7 bits (600), Expect = 6.5e-62 Identity = 130/238 (54.62%), Postives = 156/238 (65.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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