CaUC01G011930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G011930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionphotosystem I subunit O
LocationCiama_Chr01: 21737004 .. 21740809 (+)
RNA-Seq ExpressionCaUC01G011930
SyntenyCaUC01G011930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTGAACGTCCCACCACCACACACCACAAATAATTGTTTTTGTTTGATGAAAAATACTTTGATACATAAGTAGAAAACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCCACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCGCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGTAATCCACCGCTACCACCAATCAACCCATCTCCAACTTTCTGCTGCACATCTGTAATTGATTTTGGGCATTTTTCTTGTCTTCCCAGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCGCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGGTATGTGATTAGTGATTGTCCGATTTGGAGAATGATTGGTTGTTTGTTGTGATTTTGATTTTGTGTGGGGGAATGAAGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTAAATTACATTTCCCGCTAACTTCTTTTTTTTTTTTAACAAAAAAGAATTAATTTAATTTTAGTATTTAGGCCATTTCATATTTATTTGATTTTTTTATTTTCGAAATTTAAAAACCGAGTGAAATTAAAAGAACAAAGTAGTTTTTGGTTTTTACATTTTAATTAAGAATTCAAATATTTCTTTTAAATATGAGGAATTATGGTAAAAGATTTGGGAAGAAATAAATATGAACTTCTAAAATAAAAAATTAAAATTGAAATGGTATCTAATGAGGTATTATTTATTTGATTTGGATTTGAATCTCCAATTTCAAAATTCAAATTAACATATGTGAATTATTATTTGCGCTATAATTGCTTGCATTCAAATTTTGCTTGGATTTGTACTCATTCTACTCTAAACTCTTTATATATTATTATTTTTTCTAATTAAAAATGAGTATGATATAGTTAAAAAAATGTAGGAGAAACATGAAGCACTTTAAAATTGTAGTAATAACATGATGCACGTTTGTAACTAAAACTATATAAACTCTTTATTAAATAATTAAATATCAATCAATAATAATGACGGACTTAAATATTTTGGACAAATATGAATTTATGTCTTCAAATTTTGGGAGTTGTATTAATTAAAATTTTGAACTCATAACTATATCAATTTAAATCATGAACTTTCTTAAGTGTATCAATTTCCGTCTTTCTGTAGATTTCATTGGATTAATATTGTGGGAAACTTATGATTTGAGCCAATTATAAACTCCTCAATTTTCATTACTAAATTAATTTAGATATGTCATTACAATTACGTTTGAAAATCATATATGCATTGATTCTTAAACGCGTGTACACTTCTTCAAATGTCGATTTTACAAAACGAACAATATTATAGTAAATGCATGAATGATTATCAAAGAAAATTTTGACCAAGAGTCTAAATTGGTCAATTTATGAAAGTTTAGGGGTTTAATTAATATAATTATGAGTTTCACACAAGATTTTTTTAAATGGAATGTAATGGAGGGTGTAAATTGGTACACTTACAAAAGTTAAAAGTTTATATTAATACTTTCACCAATAAATTTTTTATAACTATTTGACTTTTGTTTTGTTATTCACCTTCACCAATGTTTTTGAAAATCAAACCAACATTTAAAAAAAAAAAAAAAGTAGTTTTCAAAAATTTACTTTTATTTTAGAATTTGACTAAGAATTAAAGTGTTGTTTAAGAAATTTACCTACCCAAAATGGAATATATGAGAAATTAAACATAATTTCAAAAATAAAAAATAAAAAATTAAATTGTTACTTATTGAGGCTGTAGTTCTTAAATTTTTATTTTATTTTATTATTATTATTTTTTTTTTTTTTGAAATTTGGTTAAAAGACCTAATGTTTACCTTGGGAAGAGGGAAACATGATTAAAGAATGGTGAGAAAACACAAAACCAAAAAGTTAAATAGTTATTCAAGGAAGCCTTAAATTTTTAAAAAATCTTTAGAAATTATTTAGAAGTAAGAATTATTTAAGGTTGAATTACCATGTTCATCCTTTACCGTTGAATTTGAGTTTTTCTATTTTCAAATATTTAATTTCAGTTTTTTAATCTCAATATATCTTAAATTTAGTCACCACCCTTAGCTTATGGTTAGTTTTTTATAAAACTTTTGTTATCTATTATCATTTTTCTATAAATTTTAAAAACATATTGATATATTATATTTATTTGCATGAAAATTATTATTATTATATAACCAATTTTAATGAAAATTAACTCCGAAGAACAAAGTTCAAAGTTTGTTAAAAATACCAACTAAAATTGAATCCAATCTGGAACAACGACTAAAATGATATTTTAATTACAATGACTGGGATAAAATTAAAATGTGTGTATTTCAGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATCGCAACCTCCAAATCTTGGTATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGATTTGAACTATTAAGTTCAAAGGAAAAGTGATAAGTAACACTCGAGGACATGTGATATGAACGGAGGAACTTTAAACATGCAATATGAACATAAAAAATGAGCCATACATGCTGTCCAAGTTTACACTAAGCAAAGAAGAAGAATTATATGAAGTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATGGTTACAAATGCATGAAATATGGTTGAAAAATATTAATCTCGGATTTATTGTATTTATTAAATGTATTTTTCAGTTTTGAGTCATTTTATGTGATTTTATGTTACAATTTCATCATGGCTTATAATGGTCATTAATTATGAGTGTTATAACTCTTTGAATGCCTCATAGAATGTTTAAGGTTAGATTTTGAGACCTATATAATCCCATGTAATTATTTAAAAATGAGAGATGGAAGAGATTTGAAAATGTAGTAAAAGAGCCTTTGAGCTTTCTTTAAGCCTTGTGCTATGTTTCTTTTGCGATTCTATGGTGTTTAGGTTGCATGTCCAAAACCATGCAAACTTGACTTGATCGATCTTGTTTGTGGAGTGGTTCGAAGATCAAGGATCAATGGGAGCATGAAGCTTTGTTCGATCCGTGGTTTTGTTGATCGTCTAAGTAATGACCATTATAAGTAACACTCGAGGACTCTGATACCAAATAATAAGTAACACTCAACGACTTAGATTTAACAACCTTGTCGACAAACAAGACTTTTAGATCTCAAAATCAAACACTCGAAATTAAGATGATCTCAGCCTCTATGAATGATTAGATGACG

mRNA sequence

ATCTGAACGTCCCACCACCACACACCACAAATAATTGTTTTTGTTTGATGAAAAATACTTTGATACATAAGTAGAAAACGGCCCACTTTATCCAAAAAATTCCGAGGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCCACACAAATTTCCCAACAAAATCCCAACCTCTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCGCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCGCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGAAAATGTAATAATTCTTAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATCGCAACCTCCAAATCTTGGTATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGATTTGAACTATTAAGTTCAAAGGAAAAGTGATAAGTAACACTCGAGGACATGTGATATGAACGGAGGAACTTTAAACATGCAATATGAACATAAAAAATGAGCCATACATGCTGTCCAAGTTTACACTAAGCAAAGAAGAAGAATTATATGAAGTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATGGTTACAAATGCATGAAATATGGTTGAAAAATATTAATCTCGGATTTATTGTATTTATTAAATGTATTTTTCAGTTTTGAGTCATTTTATGTGATTTTATGTTACAATTTCATCATGGCTTATAATGGTCATTAATTATGAGTGTTATAACTCTTTGAATGCCTCATAGAATGTTTAAGGTTAGATTTTGAGACCTATATAATCCCATGTAATTATTTAAAAATGAGAGATGGAAGAGATTTGAAAATGTAGTAAAAGAGCCTTTGAGCTTTCTTTAAGCCTTGTGCTATGTTTCTTTTGCGATTCTATGGTGTTTAGGTTGCATGTCCAAAACCATGCAAACTTGACTTGATCGATCTTGTTTGTGGAGTGGTTCGAAGATCAAGGATCAATGGGAGCATGAAGCTTTGTTCGATCCGTGGTTTTGTTGATCGTCTAAGTAATGACCATTATAAGTAACACTCGAGGACTCTGATACCAAATAATAAGTAACACTCAACGACTTAGATTTAACAACCTTGTCGACAAACAAGACTTTTAGATCTCAAAATCAAACACTCGAAATTAAGATGATCTCAGCCTCTATGAATGATTAGATGACG

Coding sequence (CDS)

ATGGCCGCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCGCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGA

Protein sequence

MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
Homology
[Close]
BLAST of CaUC01G011930 vs. NCBI nr
Match: XP_038895620.1 (photosystem I subunit O [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 5.2e-72
Identity = 138/147 (93.88%), Postives = 142/147 (96.60%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA AFATSSSVVGLGT+SLSSPSSR+PRLVSGFV+ P+ ARNP AVARASGGRFTCFERD
Sbjct: 1   MATAFATSSSVVGLGTASLSSPSSRSPRLVSGFVKLPVTARNPFAVARASGGRFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 147

[Close]
BLAST of CaUC01G011930 vs. NCBI nr
Match: XP_022142590.1 (photosystem I subunit O [Momordica charantia])

HSP 1 Score: 271.9 bits (694), Expect = 3.1e-69
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFER 60
           MA AFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           +TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]
BLAST of CaUC01G011930 vs. NCBI nr
Match: XP_022973174.1 (photosystem I subunit O [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]
BLAST of CaUC01G011930 vs. NCBI nr
Match: XP_008463649.1 (PREDICTED: photosystem I subunit O [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 9.2e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of CaUC01G011930 vs. NCBI nr
Match: XP_004139499.1 (photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_022779 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of CaUC01G011930 vs. ExPASy Swiss-Prot
Match: Q949Q5 (Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.4e-58
Identity = 108/145 (74.48%), Postives = 124/145 (85.52%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MAA FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSIT-----TKPFSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

[Close]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match: A0A6J1CLD0 (photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFER 60
           MA AFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFER
Sbjct: 1   MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPAAARNPLSVARASGGRFTCFER 60

Query: 61  DWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120
           DWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL
Sbjct: 61  DWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWL 120

Query: 121 ITWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           +TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 VTWHLGLFITLTFGQIGFKGRTEDYFSK 148

[Close]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match: A0A6J1IDS7 (photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSGFIKPPVVARNPFGVARSFGGRFTCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match: A0A1S3CJR4 (photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.4e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match: A0A0A0LT61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.8e-69
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERD
Sbjct: 1   MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKPPVAARNPLSVAGASGGKFTCFERD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVISGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYFSK
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFSK 146

[Close]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match: A0A6J1EID2 (photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.1e-67
Identity = 128/147 (87.07%), Postives = 136/147 (92.52%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MA+AFATSSSVVGLG+SSLSSPSSR+PRLVS FV+ P+ ARNP  V R+ GGR TCF+RD
Sbjct: 1   MASAFATSSSVVGLGSSSLSSPSSRSPRLVSEFVKPPVVARNPFGVPRSFGGRITCFQRD 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG ELAHFPSPPALTSQFWLWLI
Sbjct: 61  WLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPALTSQFWLWLI 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYFSK 148
           TWHLGLFI LTFGQIGFKGRTEDYF K
Sbjct: 121 TWHLGLFITLTFGQIGFKGRTEDYFQK 147

[Close]
BLAST of CaUC01G011930 vs. TAIR 10
Match: AT1G08380.1 (photosystem I subunit O )

HSP 1 Score: 225.3 bits (573), Expect = 3.1e-59
Identity = 108/145 (74.48%), Postives = 124/145 (85.52%), Query Frame = 0 

Query: 1   MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERD 60
           MAA FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+
Sbjct: 1   MAATFATPSTVIGLGGSSIT-----TKPFSSSFLKPTLSAKNPLRLAGASGGRVTCFERN 60

Query: 61  WLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHFPSPPALTSQFWLWLI 120
           WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIG ELAHFP+PPALTSQFWLWL+
Sbjct: 61  WLRRDLNVVGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTELAHFPTPPALTSQFWLWLV 120

Query: 121 TWHLGLFIMLTFGQIGFKGRTEDYF 146
           TWHLGLF+ LTFGQIGFKGRTEDYF
Sbjct: 121 TWHLGLFLCLTFGQIGFKGRTEDYF 140

The following BLAST results are available for this feature:
BLAST of CaUC01G011930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895620.15.2e-7293.88photosystem I subunit O [Benincasa hispida][more]
XP_022142590.13.1e-6990.54photosystem I subunit O [Momordica charantia][more]
XP_022973174.14.1e-6989.12photosystem I subunit O [Cucurbita maxima][more]
XP_008463649.19.2e-6991.16PREDICTED: photosystem I subunit O [Cucumis melo][more]
XP_004139499.11.2e-6890.48photosystem I subunit O [Cucumis sativus] >KGN64958.1 hypothetical protein Csa_0... [more]
BLAST of CaUC01G011930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q949Q54.4e-5874.48Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1[more]
BLAST of CaUC01G011930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CLD01.5e-6990.54photosystem I subunit O OS=Momordica charantia OX=3673 GN=LOC111012668 PE=4 SV=1[more]
A0A6J1IDS72.0e-6989.12photosystem I subunit O OS=Cucurbita maxima OX=3661 GN=LOC111471677 PE=4 SV=1[more]
A0A1S3CJR44.4e-6991.16photosystem I subunit O OS=Cucumis melo OX=3656 GN=LOC103501744 PE=4 SV=1[more]
A0A0A0LT615.8e-6990.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168350 PE=4 SV=1[more]
A0A6J1EID27.1e-6787.07photosystem I subunit O OS=Cucurbita moschata OX=3662 GN=LOC111434359 PE=4 SV=1[more]
BLAST of CaUC01G011930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08380.13.1e-5974.48photosystem I subunit O [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017498Photosystem I PsaOTIGRFAMTIGR03059TIGR03059coord: 67..145
e-value: 4.8E-39
score: 130.7
IPR017498Photosystem I PsaOPANTHERPTHR36311PHOTOSYSTEM I SUBUNIT Ocoord: 1..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..27
NoneNo IPR availablePANTHERPTHR36311:SF2BNAC08G43200D PROTEINcoord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G011930.1CaUC01G011930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009767 photosynthetic electron transport chain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
molecular_function GO:0003729 mRNA binding