CaUC01G011800 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G011800
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHIT-type domain-containing protein
LocationCiama_Chr01: 20825388 .. 20831178 (+)
RNA-Seq ExpressionCaUC01G011800
SyntenyCaUC01G011800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTGTGGTTTCATAATAAGAACATGTTTCCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTAAATTAAAACTGTTTTGTTATTTTGTGATTTTGTTAACTTTGATTTCACGTCTTGAAGGGGACCCGCCAAAACTGTTTTGTTATTTTGTGATTTTATTTACTTAATTGATTCAAATAAATTTGATTAACTTATGTTCGCCTAAGTTCAAAATTACTTTACAGCCGTCTTGTTAGTTAGGAGGTCGGGTAGTTACTCAGAGAAGTCCAGGTTTATCGACATTCGTTCATCTTCTTGTTTTCGCAGCTCAGTTTCTGATGACGCGCCGTATCCTTTGATTTTTTTTCTTTGTTCTTCTGGCTATGGAGGAGGAGATGCGAACATCTGTTGATTCGTCTTCTTCAGTCAATCTTCCTTTGCGGACCATCTGTCATGTGTATGTCATTACTCCTTCATTCCATCGTTACTTCTTCAAATTTCTTTCCCCCAATTTCCTAATTTCATCCTTTTCGATTTCGAATGCTAATGCAGATGCCACAAGCAATTTTCACACTATACATGTCCTCGTTGTAATTCTCGTTACTGTTCTCTGCAATGTTACAAGGTTAGTGAAAATCCATACATATTTTGGTCGTCAGAATACTATAGCTTCCATGGGTTTAATTTTTAGGGTTTTGTAGGGTTAGGGACGGGCTTTGAGTGGTTTATTTACTAAAATTGTGTTTTTGGGCTTGCAGTCTCATAGTAACCGTTGTACTGAGTCCTTCATGCGAGAAAATGTTGTCGAGGAGCTGCGTCAATTGCGAACAGACGATAGTACTAAACGTAAAACGCTTGACATTTTGAAAAGGTTTCATTCGGAAGAGGAAATGGAAGACTTGGATGAGGAGGATGGTATGTGGTGCAAACCTTGGTTTGTTTATTAATTGAAAGTAAATTTCTGGGGTTGTATTTCTAAATTCAGCTCTGGTACCCTTTTCCTGGCTAGGAGTAGTTGTCTGTTGCCAGATTCTAGCCATGCTTTAAAAGACTATTGAGGTTTATGCCTCCATGAAAACGCACCGTGGCTTCAAGTCGTCCGTAAAAAATATAAAAATGTTTGGGTGGTGAAAATTTGAACTATTAATACTTTTTCTACTGTGATGGAAAATGTTGTCACGGAAATCATTGTAGACAGCAGATATCTTTTTAAAGTTTTTGTTTAAGTGGCAATTCACTTTTATATGATTATTGTGTTTACTAATACTTGGTCATACTAATTTAGGCTTTATAAAAATGTCATTAATTAATAATTACATATGAGGCCTATGCCTCACCTCTTCTAGAGGAAAAGCCTTAAGACTGCCTTTAGCCTCTTTTTAAAACATCGAGGGATGCTTTGCTTCCTTCTGTAATTGAGTCAAGTAGTGAAACTTTAGTGGCAATCAGAAGTTTTCGGCACTTTATTAGTTCTTTACTGATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGTGGGAATTTCTCAAAATTTAATTTTCTCGAGCTAACATAAAACTTGAGATTTTAAAGGTATGAAAAATTTGCATAATTTACTTGTGATGTTTTAAACGTCAAATAAGTCAAGAAAACCTTACCCCCAAATCTTCATTTCTCCATCAGTGTTATTCAGCCGTTCAACCCACGCTCTACACATGGCTTCTCCTTCCCAAAACGCAATTCACACACAAGACTGATTCCTAAGGGTGACAATGCGAGACCTACAACGAGCAATAATTACTCTTGTGCAACAACAGCCTCTTCCTCCAGTAGTTGGGTTGTTCTCCGACCACACTGTTCCTCCTCTTTGCAACACTCTACTTTAGCCGACCATTCATTCTGCAACAATTTTTGGCATCCTTAAACATGACCCACACATTTTTTACATTATGTACCACTCTTTTGTTCTCTTTCGGTAAGCTTGAACGATCACCCCATGCTCAATCGACTTAAGTTTAGAGTTACCCACAGTACTAAAAATACAGGCTAGTTTAGATTATTCCATCACCAACCAGCAAGGATCTAAATCATTTTGACTAAGATTTAGTAAGCACGTTGTAAACTACTTTTGGACTCTCTTAATAACGTGGTGAGTTTGAAGCAAGATTTGTTTCAGTAAATCTTTCGGAGGCTTTAAACATTTTGGGTAAGTACCCTCTACATGATCTGAGTAATATTTGTTTCATCAAGGACTCATGTTTATATGTTGAGTCTTAGGTAGAAAAACTTGGTTTAGGCCTTTGCAATTTCTTTGTAAGCGTTGTAATTTAGTTCACAACTTATGGGAACTTTTTGCTTGTAGTTTCAGATGATCTTTTGGGTTGTTTCATAATCACTTTATTTATTTATTTATTTTTTTTTTTTTGGAAGAGAATACAGTGGGTAGGAGTGCACCCAAACATCTCCACTAGTGGACACCTTCTTAGCACCTTCATCATCTTCCTTTTCATTGATATTCAATAAGCGTGAAGGGATTACAAAAGTTGATTAAAGGACTAGAGATAAGCCCAAGCAAATTTAATTTGCACCAAATGAAGAGATGGTTCACATTTTCATTGTGTTTCTGGTAGAGGATACACGACTTGGGGTTGAATTTGAATTTTGGAAGCTTTCTTTGTAAATTCTCCATAGTATTGATGCTTGTGTGGGACAAAGTCCATAGGAAGAATTTGCACTTTTTAGGGATATGTGATTTCCACATCTTCTTGTATTTATCTGCTTCAAGCGGTGGAGATAGTCTAGTTGTTTGATTGAATAAAGCTTCTTTGACGGTTGAGGCTTTGAAAGTCCCCATTGGAATCAATTTTCCATATAGGTCTGTCCCTTCCTCTGCTGTCATTTGGTATAATAAAGCTTTCTTTGAGATCATTCTAGATATTATGCTCTCTATCCCTTAAGGGTCTTCTAGGGTGTATATCCTAGTCCAACTTCTCACCATTCCACGCATCTCTAATAGTTCCATTTGGAATTTATGACAGAGCAAACATTGGGGAAGTTTTTAGCCAAAGGACTCCTTTCATGCCAAATACCTTTCCAAAAAGAGATTTTTTCTTCGTTGTTTATCTTCTAGGATAGATTGGTTTTGAACCAGTCGAGCCCTTTGACTATGGACATCCAGGGGGATTTTGTGCTATAGAACCTGCTTGTTGTTGGGATATCCCCCACAAAATTGAGCTTGTATTTGGCAAGGATCAGTCTCTTCCAGGGAGGGTTTTCCTCTTCGTGGAATCTGCACAGCCATTTGCAAAGCAGGGAGAAATTTGTATCTTCCAATCTGTTTATGCCAAGCCCACCCTTGTCTTTTGGGGAAGTAACCATCTCCCAATTGATGAGATGAGTACTGCATCCACCATATTTTTGTCTTTCCAAAGGAAGTTTCTCCAATGCTTTTCAATATTTTTATAAACGAATTTGGGGGCTTTGAAGACTGTCATCATGTATGTAGGAAGGCTGGCAAGGGATGAGTGGATTAGAGTGAGTTTGTCTCCTTTGGAAATATAGGAATATTTCCAATTGGTGAGTTTTTTTGGATCTTCTTTGGAGTGAGGCTTGCCTCCAAGTGGGACTCCCAAGTAGCTAATGGGAAGGAAATGTTGAGTTAAACCCCACCTGTTTGCAATCTCCTATGTTCTGCTACCACAGAAATCGTGGATTTATTCATGTTAATGTTTAGCCTGGTTGCGATTTCAGAATCACTTTATGTAAGTAGAATGTTAGATGATATACGATTAAGAACGATTTAAAGATGTAGCTTGCTTTGTCATAAATAGCATAAGCTTGAAGTAAATTACATATATACATTTGTGCAAAAATTTAAGACAAATTTAATCGTGTTGCACATTCTCTCTCTTACTAATTATTATTTTTTCTTTTTACATTTTTTATTAATAGAAAAAATGTCAACGATTTTAATAGGTAATTACTTTTTTTATTTTTGTAGCATTAAATACGATATATATATATATATATATTTTGTAATTAATGGGTGTGTTTTCATTTAATGTTTTTTATTGAATCCTCTTACTGTTAAGGTAAAAATCACTATATTTTAGGAATACGTTTAGGTAATTTTCTTCCGCTTTCTTTATTTGTCGTTGGTTGGGTTGTTGTTGACTCCATTTTCACCTTCAATTTTTCTTACAATTGCAGTTTTCTTCCACCTTTCTTTGCTCCTTGTTGGCTGGGTTTGTCCAATTGACTCAATTTCCATCTCCTATTTTTCTTATACTTTTTCAATTTTTTCGATCGGTCAATTTACTATTCTGATTGTGACAAGACATATCTTCAACTTTGGGTAACCAGTATCATTCATTTCTAATTCGAGTTTCTTATGGGTATGTTATTATTATTAGAGGGATTTTTTATACTAATAGCCTAAGTTAATTGAGAAGGCTTTCATTTTTGTTTTTCCTTTAGTGTATTTCAATTTCAGAATTTTGTTTTGTTCATGTATGTTAA

mRNA sequence

ATGTTTCCTGAGGAGATGCGAACATCTGTTGATTCGTCTTCTTCAGTCAATCTTCCTTTGCGGACCATCTGTCATGTATGCCACAAGCAATTTTCACACTATACATGTCCTCGTTGTAATTCTCGTTACTGTTCTCTGCAATGTTACAAGTCTCATAGTAACCGTTGTACTGAGTCCTTCATGCGAGAAAATGTTGTCGAGGAGCTGCGTCAATTGCGAACAGACGATAGTACTAAACGTAAAACGCTTGACATTTTGAAAAGGTTTCATTCGGAAGAGGAAATGGAAGACTTGGATGAGGAGGATGAATTTTGTTTTGTTCATGTATGTTAA

Coding sequence (CDS)

ATGTTTCCTGAGGAGATGCGAACATCTGTTGATTCGTCTTCTTCAGTCAATCTTCCTTTGCGGACCATCTGTCATGTATGCCACAAGCAATTTTCACACTATACATGTCCTCGTTGTAATTCTCGTTACTGTTCTCTGCAATGTTACAAGTCTCATAGTAACCGTTGTACTGAGTCCTTCATGCGAGAAAATGTTGTCGAGGAGCTGCGTCAATTGCGAACAGACGATAGTACTAAACGTAAAACGCTTGACATTTTGAAAAGGTTTCATTCGGAAGAGGAAATGGAAGACTTGGATGAGGAGGATGAATTTTGTTTTGTTCATGTATGTTAA

Protein sequence

MFPEEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRENVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEEDEFCFVHVC
Homology
[Close]
BLAST of CaUC01G011800 vs. NCBI nr
Match: XP_022990668.1 (zinc finger HIT domain-containing protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 9.6e-47
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. NCBI nr
Match: XP_022990596.1 (zinc finger HIT domain-containing protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 9.6e-47
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. NCBI nr
Match: XP_023514271.1 (zinc finger HIT domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-46
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRT+CHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTVCHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDD TKRKTLDILKRFHSEEEMEDLDE+D
Sbjct: 63  NVVEELRQLRTDDRTKRKTLDILKRFHSEEEMEDLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. NCBI nr
Match: XP_022957526.1 (zinc finger HIT domain-containing protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEME LDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEGLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. NCBI nr
Match: XP_022957527.1 (zinc finger HIT domain-containing protein 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEME LDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEGLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. ExPASy Swiss-Prot
Match: Q9QY66 (Zinc finger HIT domain-containing protein 2 OS=Mus musculus OX=10090 GN=Znhit2 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 32  SHYTCPRCNSRYCSLQCYKSHSNRCTESFMRENVVEELRQLRTDDSTKRKTLDILKRFHS 91
           + YTCPRCN+ YCSL+CY++H   C E F R+ V   LR+LR   ++  +    L+R   
Sbjct: 18  ARYTCPRCNAPYCSLRCYRAH-GACAEDFYRDQV---LRELRGRSASPSRLAGALRRLRE 77

Query: 92  EEEMEDLDEE 102
           + E ED  EE
Sbjct: 78  QREAEDEPEE 83

[Close]
BLAST of CaUC01G011800 vs. ExPASy Swiss-Prot
Match: Q9UHR6 (Zinc finger HIT domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZNHIT2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06
Identity = 30/74 (40.54%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 24 CHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRENVVEELRQLRTDDSTKRKTL 83
          C     Q + YTCPRCN+ YCSL+CY++H   C E+F R+ V+ ELR      S   +  
Sbjct: 10 CPAGEVQPARYTCPRCNAPYCSLRCYRTHGT-CAENFYRDQVLGELRGCSAPPS---RLA 69

Query: 84 DILKRFHSEEEMED 98
            L+R   + E ED
Sbjct: 70 SALRRLRQQRETED 79

[Close]
BLAST of CaUC01G011800 vs. ExPASy Swiss-Prot
Match: Q2TBW5 (Zinc finger HIT domain-containing protein 2 OS=Bos taurus OX=9913 GN=ZNHIT2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0 

Query: 24 CHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRENVVEELRQLRTDDSTKRKTL 83
          C     Q + YTCPRCN  YCSL+CY++H + C E F R+ V+ ELR      S   +  
Sbjct: 10 CPTGEAQPARYTCPRCNVPYCSLRCYRAHGS-CAEEFYRDQVLGELRGRSASPS---RLA 69

Query: 84 DILKRFHSEEEMED 98
            L+R   + E ED
Sbjct: 70 TALRRLRQQRETED 79

[Close]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match: A0A6J1JND7 (zinc finger HIT domain-containing protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487403 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match: A0A6J1JTY4 (zinc finger HIT domain-containing protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487403 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match: A0A0A0KV24 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623610 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 94/100 (94.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS Y+CPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYSCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEEDE 104
           NVVEELRQLRTDDS KRKTLDILKRFH+EEEMEDLDEED+
Sbjct: 63  NVVEELRQLRTDDSAKRKTLDILKRFHAEEEMEDLDEEDD 102

[Close]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match: A0A6J1GZG3 (zinc finger HIT domain-containing protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458902 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEME LDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEGLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match: A0A6J1GZD0 (zinc finger HIT domain-containing protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458902 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 4   EEMRTSVDSSSSVNLPLRTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 63
           EE+RTSVDSSSSVNLPLRTICHVCHKQFS YTCPRCNSRYCSLQCYKSHSNRCTESFMRE
Sbjct: 3   EEIRTSVDSSSSVNLPLRTICHVCHKQFSQYTCPRCNSRYCSLQCYKSHSNRCTESFMRE 62

Query: 64  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEDLDEED 103
           NVVEELRQLRTDDSTKRKTLDILKRFHSEEEME LDE+D
Sbjct: 63  NVVEELRQLRTDDSTKRKTLDILKRFHSEEEMEGLDEDD 101

[Close]
BLAST of CaUC01G011800 vs. TAIR 10
Match: AT5G63830.1 (HIT-type Zinc finger family protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 0 

Query: 7  RTSVDSSSSVNLPL-----RTICHVCHKQFSHYTCPRCNSRYCSLQCYKSHSNRCTESFM 66
          +T + S SS + PL     R ICHVC+KQFS YTCPRCN RYCSL CYKSHS +CTESFM
Sbjct: 4  KTIISSESSNSSPLNPSSTRIICHVCNKQFSQYTCPRCNFRYCSLPCYKSHSVQCTESFM 63

Query: 67 RENVVEELRQLRTDDSTKRKTLDILKRFHSEEEMED 98
          R+NV +EL+Q+R+DD TKRK L+ILKRFH EEE +D
Sbjct: 64 RDNVNDELKQVRSDDQTKRKMLEILKRFHEEEEEDD 99

The following BLAST results are available for this feature:
BLAST of CaUC01G011800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990668.19.6e-4796.97zinc finger HIT domain-containing protein 2 isoform X2 [Cucurbita maxima][more]
XP_022990596.19.6e-4796.97zinc finger HIT domain-containing protein 2 isoform X1 [Cucurbita maxima][more]
XP_023514271.14.8e-4694.95zinc finger HIT domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022957526.16.2e-4695.96zinc finger HIT domain-containing protein 2 isoform X1 [Cucurbita moschata][more]
XP_022957527.16.2e-4695.96zinc finger HIT domain-containing protein 2 isoform X2 [Cucurbita moschata][more]
BLAST of CaUC01G011800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9QY663.5e-0742.86Zinc finger HIT domain-containing protein 2 OS=Mus musculus OX=10090 GN=Znhit2 P... [more]
Q9UHR61.0e-0640.54Zinc finger HIT domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZNHIT2 PE... [more]
Q2TBW52.3e-0640.54Zinc finger HIT domain-containing protein 2 OS=Bos taurus OX=9913 GN=ZNHIT2 PE=2... [more]
BLAST of CaUC01G011800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JND74.7e-4796.97zinc finger HIT domain-containing protein 2 isoform X1 OS=Cucurbita maxima OX=36... [more]
A0A6J1JTY44.7e-4796.97zinc finger HIT domain-containing protein 2 isoform X2 OS=Cucurbita maxima OX=36... [more]
A0A0A0KV243.0e-4694.00HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G623610 PE... [more]
A0A6J1GZG33.0e-4695.96zinc finger HIT domain-containing protein 2 isoform X1 OS=Cucurbita moschata OX=... [more]
A0A6J1GZD03.0e-4695.96zinc finger HIT domain-containing protein 2 isoform X2 OS=Cucurbita moschata OX=... [more]
BLAST of CaUC01G011800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63830.11.3e-3066.67HIT-type Zinc finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 21..50
e-value: 8.4E-12
score: 44.8
IPR007529Zinc finger, HIT-typePROSITEPS51083ZF_HITcoord: 24..56
score: 10.653527
NoneNo IPR availableGENE3D3.30.60.190coord: 9..65
e-value: 7.6E-17
score: 62.8
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 19..58
IPR039646Zinc finger HIT domain-containing protein 2PANTHERPTHR15555ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATEDcoord: 17..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G011800.1CaUC01G011800.1mRNA