Homology
BLAST of CaUC01G011570 vs. NCBI nr
Match:
XP_038877228.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa hispida])
HSP 1 Score: 1003.8 bits (2594), Expect = 5.4e-289
Identity = 488/524 (93.13%), Postives = 505/524 (96.37%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSS PS+TAIPSQLQQYPNPPS IPLSNPT LNFPRSPNSSH NISSKF ANSIDPIV W
Sbjct: 1 MSSSPSYTAIPSQLQQYPNPPSSIPLSNPTKLNFPRSPNSSHRNISSKFPANSIDPIVLW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSSLARYCRNGQLSEAA EFTRMRLAGVEPNHVTFITLLSGC DFPSESLFFGSSLHGYA
Sbjct: 61 TSSLARYCRNGQLSEAATEFTRMRLAGVEPNHVTFITLLSGCTDFPSESLFFGSSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
RK GLDT HVMVGTAL+DMYAKCAQ LARKVFDYLG+KNSV+WNTMLDGYTRNGEIELA
Sbjct: 121 RKLGLDTGHVMVGTALVDMYAKCAQSRLARKVFDYLGMKNSVTWNTMLDGYTRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+DLFDEMPTRDAISWTALINGLLK G+SEQALECFHQMQCSGIEPDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGFSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALTLGLWVNRFVMQQEFKDNIRISNSL+DMYSRCGCIEFARQVFEKMPKRTLVSWNSII
Sbjct: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLVDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFAVNGFADESLEFFDAMQ EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKR+H++
Sbjct: 301 VGFAVNGFADESLEFFDAMQNEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRIHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRT+GDVS+AE+LMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTYGDVSLAEKLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
HL KLDP GDSNYVLLSNIYAAIG+WEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV
Sbjct: 421 HLSKLDPRGDSNYVLLSNIYAAIGRWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DAD+IYSMLELLFHELKI GYVPDT+II+NTKE SKD
Sbjct: 481 AGDKYHADADNIYSMLELLFHELKIYGYVPDTNIILNTKEFSKD 524
BLAST of CaUC01G011570 vs. NCBI nr
Match:
XP_022142716.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica charantia])
HSP 1 Score: 957.2 bits (2473), Expect = 5.8e-275
Identity = 466/524 (88.93%), Postives = 492/524 (93.89%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIP++TA QLQQYPNP + IPL NP +NFPRS NSS+ +ISSK T NSIDPIV W
Sbjct: 1 MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSS+ARYCRNGQL+EAAAEFT MRLAGVEPNHVT ITLLSGCADFPSESL+FGSSLHGYA
Sbjct: 61 TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
RK GLDT HVMVGT+++DMYAKCAQLGLAR+VFDYL +KNSVSWNTMLDGYTRNGEIELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+DLFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQCSGI+PDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
G LTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCI FARQVFE+M KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VG+A NGFADESLEFFDAMQKEGFKPD VSYTGALTACSHAGLVNKGLELFDNMKRVHR+
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
PRIEHYGCIVDLYGRAGRLEDAL+VIE+MPMKPNEVVLGSLLAACRTHGDVS+AERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
HL KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DADSIYSML+LL HELKICG VP+T+ +NTKESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524
BLAST of CaUC01G011570 vs. NCBI nr
Match:
XP_008458940.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis melo] >KAA0054376.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12413.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 942.6 bits (2435), Expect = 1.5e-270
Identity = 465/524 (88.74%), Postives = 488/524 (93.13%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIPSH A PSQLQQ P+ S IPLSNPT +NFPRSP S H NI SKFTANS+ PIVQW
Sbjct: 1 MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSS+ARYC NGQL EAAAEFTRMRLAGVEPNH+TFITLLSGCADFPSES FF SSLHGYA
Sbjct: 61 TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSES-FFASSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
KFGLDT HVMVGTALIDMY+KC+QLGLA+KVFDYLGVKNSVSWNTML+G+ RNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ SG+ DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALT GLWVNRFVMQQEFKDN+RISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFA NGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVH++
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TP IEHYGCIVDLYGRAGRLEDA NVIEEMPMKPNEVVLGSLLAACRTHGDV +AERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
H+FKLD GDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKK G SSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DAD+IYSML+LLFHELK+CGYVPDTDII+NTK+S+KD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521
BLAST of CaUC01G011570 vs. NCBI nr
Match:
XP_004139593.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sativus])
HSP 1 Score: 941.8 bits (2433), Expect = 2.5e-270
Identity = 462/524 (88.17%), Postives = 485/524 (92.56%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIPSHTA PSQLQ P PS IPLSNPT LNFPRSPNS H NISSKF NS+DPIV W
Sbjct: 1 MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNH+TFITLLS CADFPSES FF SSLHGYA
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
K+GLDT HVMVGTALIDMY+KCAQLG ARKVF LGVKNSVSWNTML+G+ RNGEIELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ SG+ DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALTLGLWV+RFVM QEFKDNI+ISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFAVNGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VH++
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TPRIEHYGCIVDLYGRAGRLEDALN+IEEMPMKPNEVVLGSLLAACRTHGDV++AERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
HLFKLDP GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGD YH DAD+IYSML+LL HELK+CGYVP +D I+NTKES+KD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
BLAST of CaUC01G011570 vs. NCBI nr
Match:
XP_022967078.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita maxima])
HSP 1 Score: 917.9 bits (2371), Expect = 3.9e-263
Identity = 447/526 (84.98%), Postives = 480/526 (91.25%), Query Frame = 0
Query: 1 MSSIPSHTAIP--SQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIV 60
MSS+PSHT IP QLQQY NPPSPIP SNP+NL+FPR+PNSS N I PIV
Sbjct: 1 MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNSS----------NPIKPIV 60
Query: 61 QWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHG 120
WTSS+ARYCRN QL+EAAAEFTRMRLAGVEPNH+TFITLLSGCADFPS SL FG+SLHG
Sbjct: 61 LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120
Query: 121 YARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIE 180
Y RK GLDT HVMVGTALI MYAKCAQLGLAR VFDYL +KNSV+WNTMLDGY RNGEIE
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIE 180
Query: 181 LALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
LA++LFDEMPTRDAISWTALING LK GYSEQALECFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACA 240
Query: 241 DLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNS 300
DLGAL+ GLWVNRF+MQQEFKDNIRISNSLIDMYSRCGCIEFARQVF+KM K TLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNS 300
Query: 301 IIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360
+IVGFA+NGFADESLEFFDAMQKEGF DGVSYTGALTACSHAGLVNKGLELFDNMKRVH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360
Query: 361 RVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERL 420
R+TPRIEHYGCIVDLY RAGRL++ALNVIE MPMKPNEVVLGSLLAACRTHGDVS+AERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHE 480
+K+LF+LDPGGDS+YVLLSNIYAA+G+WEGANKVRRTMKARGVQKKPG SS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHE 480
Query: 481 FVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
FVAGDKYH DAD+IYSMLE+LFHELKI GYVP+T MN ESSK+
Sbjct: 481 FVAGDKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516
BLAST of CaUC01G011570 vs. ExPASy Swiss-Prot
Match:
Q9MA50 (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1)
HSP 1 Score: 594.7 bits (1532), Expect = 9.9e-169
Identity = 287/477 (60.17%), Postives = 361/477 (75.68%), Query Frame = 0
Query: 37 SPNSSHHNISSKFTANSIDPIVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFI 96
+P HN S+ T V WTS + RNG+L+EAA EF+ M LAGVEPNH+TFI
Sbjct: 22 NPKIQRHNQSTSETT------VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFI 81
Query: 97 TLLSGCADFPSESLFFGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYL 156
LLSGC DF S S G LHGYA K GLD HVMVGTA+I MY+K + AR VFDY+
Sbjct: 82 ALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM 141
Query: 157 GVKNSVSWNTMLDGYTRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFH 216
KNSV+WNTM+DGY R+G+++ A +FD+MP RD ISWTA+ING +K GY E+AL F
Sbjct: 142 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFR 201
Query: 217 QMQCSGIEPDYVSIIAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCG 276
+MQ SG++PDYV+IIA L AC +LGAL+ GLWV+R+V+ Q+FK+N+R+SNSLID+Y RCG
Sbjct: 202 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 261
Query: 277 CIEFARQVFEKMPKRTLVSWNSIIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALT 336
C+EFARQVF M KRT+VSWNS+IVGFA NG A ESL +F MQ++GFKPD V++TGALT
Sbjct: 262 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 321
Query: 337 ACSHAGLVNKGLELFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNE 396
ACSH GLV +GL F MK +R++PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNE
Sbjct: 322 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 381
Query: 397 VVLGSLLAACRTHG-DVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRT 456
VV+GSLLAAC HG ++ +AERLMKHL L+ SNYV+LSN+YAA GKWEGA+K+RR
Sbjct: 382 VVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRK 441
Query: 457 MKARGVQKKPGCSSVEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDT 513
MK G++K+PG SS+EID +H F+AGD H + I +LEL+ +L++ G V +T
Sbjct: 442 MKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
BLAST of CaUC01G011570 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 394.0 bits (1011), Expect = 2.6e-108
Identity = 185/461 (40.13%), Postives = 293/461 (63.56%), Query Frame = 0
Query: 65 ARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYARKFG 124
+ Y R G EA F M +GV P+ ++ ++ +S C+ ++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 125 LDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELALDLF 184
++W + ALIDMY KC + A ++FD + K V+WN+++ GY NGE++ A + F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 185 DEMPTRDAISWTALINGLLKHGYSEQALECFHQMQC-SGIEPDYVSIIAVLAACADLGAL 244
+ MP ++ +SW +I+GL++ E+A+E F MQ G+ D V+++++ +AC LGAL
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 245 TLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSIIVGF 304
L W+ ++ + + ++R+ +L+DM+SRCG E A +F + R + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 305 AVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRVTPR 364
A+ G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F +M ++H V+P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 365 IEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMKHLF 424
HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+ SLLAACR G+V MA + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 425 KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFVAGD 484
L P +YVLLSN+YA+ G+W KVR +MK +G++K PG SS++I GK HEF +GD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 485 KYHTDADSIYSMLELLFHELKICGYVPD-TDIIMNTKESSK 524
+ H + +I +ML+ + G+VPD ++++M+ E K
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
BLAST of CaUC01G011570 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 375.6 bits (963), Expect = 9.5e-103
Identity = 172/476 (36.13%), Postives = 295/476 (61.97%), Query Frame = 0
Query: 49 FTANSIDPIVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSE 108
FT +V W S + + + G +A F +M V+ +HVT + +LS CA
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--R 248
Query: 109 SLFFGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTML 168
+L FG + Y + ++ ++ + A++DMY KC + A+++FD + K++V+W TML
Sbjct: 249 NLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 169 DGYTRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQC-SGIEPDY 228
DGY + + E A ++ + MP +D ++W ALI+ ++G +AL FH++Q ++ +
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 368
Query: 229 VSIIAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEK 288
+++++ L+ACA +GAL LG W++ ++ + + N ++++LI MYS+CG +E +R+VF
Sbjct: 369 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 428
Query: 289 MPKRTLVSWNSIIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
+ KR + W+++I G A++G +E+++ F MQ+ KP+GV++T ACSH GLV++
Sbjct: 429 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 488
Query: 349 LELFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACR 408
LF M+ + + P +HY CIVD+ GR+G LE A+ IE MP+ P+ V G+LL AC+
Sbjct: 489 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 548
Query: 409 THGDVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGC 468
H ++++AE L +L+P D +VLLSNIYA +GKWE +++R+ M+ G++K+PGC
Sbjct: 549 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 608
Query: 469 SSVEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSK 524
SS+EIDG +HEF++GD H ++ +Y L + +LK GY P+ ++ E +
Sbjct: 609 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
BLAST of CaUC01G011570 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 372.5 bits (955), Expect = 8.0e-102
Identity = 180/474 (37.97%), Postives = 292/474 (61.60%), Query Frame = 0
Query: 53 SIDP-IVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLF 112
+IDP + +T+++ NG +A + ++ + + PN TF +LL C S
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149
Query: 113 FGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGY 172
G +H + KFGL V T L+D+YAK + A+KVFD + ++ VS M+ Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209
Query: 173 TRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSG-IEPDYVSI 232
+ G +E A LFD M RD +SW +I+G +HG+ AL F ++ G +PD +++
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269
Query: 233 IAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPK 292
+A L+AC+ +GAL G W++ FV + N+++ LIDMYS+CG +E A VF P+
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329
Query: 293 RTLVSWNSIIVGFAVNGFADESLEFFDAMQK-EGFKPDGVSYTGALTACSHAGLVNKGLE 352
+ +V+WN++I G+A++G++ ++L F+ MQ G +P +++ G L AC+HAGLVN+G+
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389
Query: 353 LFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTH 412
+F++M + + + P+IEHYGC+V L GRAG+L+ A I+ M M + V+ S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449
Query: 413 GDVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSS 472
GD + + + ++L L+ YVLLSNIYA++G +EG KVR MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509
Query: 473 VEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSK 524
+EI+ KVHEF AGD+ H+ + IY+ML + +K GYVP+T+ ++ E ++
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556
BLAST of CaUC01G011570 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 369.8 bits (948), Expect = 5.2e-101
Identity = 174/470 (37.02%), Postives = 294/470 (62.55%), Query Frame = 0
Query: 57 IVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSL 116
+V W + + RYCR G + EA F M+ + V P+ + ++S C + ++ + ++
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACG--RTGNMRYNRAI 236
Query: 117 HGY--ARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRN 176
+ + +DT H++ TAL+ MYA + +AR+ F + V+N M+ GY++
Sbjct: 237 YEFLIENDVRMDT-HLL--TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 296
Query: 177 GEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVL 236
G ++ A +FD+ +D + WT +I+ ++ Y ++AL F +M CSGI+PD VS+ +V+
Sbjct: 297 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 356
Query: 237 AACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLV 296
+ACA+LG L WV+ + + + I+N+LI+MY++CG ++ R VFEKMP+R +V
Sbjct: 357 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 416
Query: 297 SWNSIIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNM 356
SW+S+I +++G A ++L F M++E +P+ V++ G L CSH+GLV +G ++F +M
Sbjct: 417 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 476
Query: 357 KRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSM 416
+ +TP++EHYGC+VDL+GRA L +AL VIE MP+ N V+ GSL++ACR HG++ +
Sbjct: 477 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 536
Query: 417 AERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDG 476
+ K + +L+P D VL+SNIYA +WE +RR M+ + V K+ G S ++ +G
Sbjct: 537 GKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 596
Query: 477 KVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDT-DIIMNTKESSK 524
K HEF+ GDK H ++ IY+ L+ + +LK+ GYVPD ++++ +E K
Sbjct: 597 KSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
BLAST of CaUC01G011570 vs. ExPASy TrEMBL
Match:
A0A6J1CN07 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012760 PE=4 SV=1)
HSP 1 Score: 957.2 bits (2473), Expect = 2.8e-275
Identity = 466/524 (88.93%), Postives = 492/524 (93.89%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIP++TA QLQQYPNP + IPL NP +NFPRS NSS+ +ISSK T NSIDPIV W
Sbjct: 1 MSSIPANTAAAVQLQQYPNPATSIPLPNPETINFPRSENSSNRHISSKSTGNSIDPIVLW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSS+ARYCRNGQL+EAAAEFT MRLAGVEPNHVT ITLLSGCADFPSESL+FGSSLHGYA
Sbjct: 61 TSSIARYCRNGQLAEAAAEFTSMRLAGVEPNHVTLITLLSGCADFPSESLYFGSSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
RK GLDT HVMVGT+++DMYAKCAQLGLAR+VFDYL +KNSVSWNTMLDGYTRNGEIELA
Sbjct: 121 RKLGLDTAHVMVGTSIVDMYAKCAQLGLARRVFDYLRMKNSVSWNTMLDGYTRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+DLFDEMPTRDAISWTALINGLLK GYSEQALECFHQMQCSGI+PDYVSIIAVLAACADL
Sbjct: 181 IDLFDEMPTRDAISWTALINGLLKQGYSEQALECFHQMQCSGIKPDYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
G LTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCI FARQVFE+M KRTLVSWNSII
Sbjct: 241 GTLTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIGFARQVFERMSKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VG+A NGFADESLEFFDAMQKEGFKPD VSYTGALTACSHAGLVNKGLELFDNMKRVHR+
Sbjct: 301 VGYAANGFADESLEFFDAMQKEGFKPDAVSYTGALTACSHAGLVNKGLELFDNMKRVHRI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
PRIEHYGCIVDLYGRAGRLEDAL+VIE+MPMKPNEVVLGSLLAACRTHGDVS+AERLMK
Sbjct: 361 IPRIEHYGCIVDLYGRAGRLEDALDVIEKMPMKPNEVVLGSLLAACRTHGDVSLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
HL KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLSKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGFSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DADSIYSML+LL HELKICG VP+T+ +NTKESSKD
Sbjct: 481 AGDKYHADADSIYSMLQLLVHELKICGSVPETETFLNTKESSKD 524
BLAST of CaUC01G011570 vs. ExPASy TrEMBL
Match:
A0A5A7UJB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G002000 PE=4 SV=1)
HSP 1 Score: 942.6 bits (2435), Expect = 7.2e-271
Identity = 465/524 (88.74%), Postives = 488/524 (93.13%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIPSH A PSQLQQ P+ S IPLSNPT +NFPRSP S H NI SKFTANS+ PIVQW
Sbjct: 1 MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSS+ARYC NGQL EAAAEFTRMRLAGVEPNH+TFITLLSGCADFPSES FF SSLHGYA
Sbjct: 61 TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSES-FFASSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
KFGLDT HVMVGTALIDMY+KC+QLGLA+KVFDYLGVKNSVSWNTML+G+ RNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ SG+ DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALT GLWVNRFVMQQEFKDN+RISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFA NGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVH++
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TP IEHYGCIVDLYGRAGRLEDA NVIEEMPMKPNEVVLGSLLAACRTHGDV +AERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
H+FKLD GDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKK G SSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DAD+IYSML+LLFHELK+CGYVPDTDII+NTK+S+KD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521
BLAST of CaUC01G011570 vs. ExPASy TrEMBL
Match:
A0A1S3C956 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498199 PE=4 SV=1)
HSP 1 Score: 942.6 bits (2435), Expect = 7.2e-271
Identity = 465/524 (88.74%), Postives = 488/524 (93.13%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIPSH A PSQLQQ P+ S IPLSNPT +NFPRSP S H NI SKFTANS+ PIVQW
Sbjct: 1 MSSIPSHIASPSQLQQPPS--SSIPLSNPTKVNFPRSPKSPHCNIFSKFTANSVHPIVQW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSS+ARYC NGQL EAAAEFTRMRLAGVEPNH+TFITLLSGCADFPSES FF SSLHGYA
Sbjct: 61 TSSIARYCGNGQLPEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSES-FFASSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
KFGLDT HVMVGTALIDMY+KC+QLGLA+KVFDYLGVKNSVSWNTML+G+ RNGEIELA
Sbjct: 121 CKFGLDTGHVMVGTALIDMYSKCSQLGLAKKVFDYLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ SG+ DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVVADYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALT GLWVNRFVMQQEFKDN+RISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTSGLWVNRFVMQQEFKDNVRISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFA NGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVH++
Sbjct: 301 VGFAFNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TP IEHYGCIVDLYGRAGRLEDA NVIEEMPMKPNEVVLGSLLAACRTHGDV +AERLMK
Sbjct: 361 TPGIEHYGCIVDLYGRAGRLEDASNVIEEMPMKPNEVVLGSLLAACRTHGDVRLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
H+FKLD GDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKK G SSVEIDGKVHEFV
Sbjct: 421 HIFKLDSVGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKRGYSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGDKYH DAD+IYSML+LLFHELK+CGYVPDTDII+NTK+S+KD
Sbjct: 481 AGDKYHADADNIYSMLDLLFHELKVCGYVPDTDIILNTKDSNKD 521
BLAST of CaUC01G011570 vs. ExPASy TrEMBL
Match:
A0A0A0LYD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1)
HSP 1 Score: 941.8 bits (2433), Expect = 1.2e-270
Identity = 462/524 (88.17%), Postives = 485/524 (92.56%), Query Frame = 0
Query: 1 MSSIPSHTAIPSQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIVQW 60
MSSIPSHTA PSQLQ P PS IPLSNPT LNFPRSPNS H NISSKF NS+DPIV W
Sbjct: 1 MSSIPSHTATPSQLQLPPFTPSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLW 60
Query: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYA 120
TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNH+TFITLLS CADFPSES FF SSLHGYA
Sbjct: 61 TSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYA 120
Query: 121 RKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELA 180
K+GLDT HVMVGTALIDMY+KCAQLG ARKVF LGVKNSVSWNTML+G+ RNGEIELA
Sbjct: 121 CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180
Query: 181 LDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACADL 240
+ LFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQ SG+ DYVSIIAVLAACADL
Sbjct: 181 IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240
Query: 241 GALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSII 300
GALTLGLWV+RFVM QEFKDNI+ISNSLIDMYSRCGCIEFARQVF KM KRTLVSWNSII
Sbjct: 241 GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300
Query: 301 VGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRV 360
VGFAVNGFADESLEFF AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK VH++
Sbjct: 301 VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360
Query: 361 TPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMK 420
TPRIEHYGCIVDLYGRAGRLEDALN+IEEMPMKPNEVVLGSLLAACRTHGDV++AERLMK
Sbjct: 361 TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420
Query: 421 HLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFV 480
HLFKLDP GD+ YVLLSNIYAAIGKW+GAN VRRTMKARGVQKKPG SSVEIDGKVHEFV
Sbjct: 421 HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480
Query: 481 AGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
AGD YH DAD+IYSML+LL HELK+CGYVP +D I+NTKES+KD
Sbjct: 481 AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKD 524
BLAST of CaUC01G011570 vs. ExPASy TrEMBL
Match:
A0A6J1HU31 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466586 PE=4 SV=1)
HSP 1 Score: 917.9 bits (2371), Expect = 1.9e-263
Identity = 447/526 (84.98%), Postives = 480/526 (91.25%), Query Frame = 0
Query: 1 MSSIPSHTAIP--SQLQQYPNPPSPIPLSNPTNLNFPRSPNSSHHNISSKFTANSIDPIV 60
MSS+PSHT IP QLQQY NPPSPIP SNP+NL+FPR+PNSS N I PIV
Sbjct: 1 MSSVPSHTGIPFQFQLQQYSNPPSPIPHSNPSNLSFPRTPNSS----------NPIKPIV 60
Query: 61 QWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHG 120
WTSS+ARYCRN QL+EAAAEFTRMRLAGVEPNH+TFITLLSGCADFPS SL FG+SLHG
Sbjct: 61 LWTSSIARYCRNAQLAEAAAEFTRMRLAGVEPNHITFITLLSGCADFPSHSLHFGASLHG 120
Query: 121 YARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIE 180
Y RK GLDT HVMVGTALI MYAKCAQLGLAR VFDYL +KNSV+WNTMLDGY RNGEIE
Sbjct: 121 YVRKLGLDTGHVMVGTALIAMYAKCAQLGLARNVFDYLAMKNSVTWNTMLDGYMRNGEIE 180
Query: 181 LALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSGIEPDYVSIIAVLAACA 240
LA++LFDEMPTRDAISWTALING LK GYSEQALECFH+MQCSGIEPDYVSIIAVLAACA
Sbjct: 181 LAIELFDEMPTRDAISWTALINGFLKQGYSEQALECFHEMQCSGIEPDYVSIIAVLAACA 240
Query: 241 DLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNS 300
DLGAL+ GLWVNRF+MQQEFKDNIRISNSLIDMYSRCGCIEFARQVF+KM K TLVSWNS
Sbjct: 241 DLGALSFGLWVNRFLMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFDKMSKHTLVSWNS 300
Query: 301 IIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360
+IVGFA+NGFADESLEFFDAMQKEGF DGVSYTGALTACSHAGLVNKGLELFDNMKRVH
Sbjct: 301 MIVGFAINGFADESLEFFDAMQKEGFMADGVSYTGALTACSHAGLVNKGLELFDNMKRVH 360
Query: 361 RVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERL 420
R+TPRIEHYGCIVDLY RAGRL++ALNVIE MPMKPNEVVLGSLLAACRTHGDVS+AERL
Sbjct: 361 RITPRIEHYGCIVDLYSRAGRLDEALNVIETMPMKPNEVVLGSLLAACRTHGDVSLAERL 420
Query: 421 MKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHE 480
+K+LF+LDPGGDS+YVLLSNIYAA+G+WEGANKVRRTMKARGVQKKPG SS+EIDGKVHE
Sbjct: 421 IKYLFELDPGGDSSYVLLSNIYAAVGRWEGANKVRRTMKARGVQKKPGFSSIEIDGKVHE 480
Query: 481 FVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSKD 525
FVAGDKYH DAD+IYSMLE+LFHELKI GYVP+T MN ESSK+
Sbjct: 481 FVAGDKYHVDADNIYSMLEVLFHELKIYGYVPETATFMNGNESSKE 516
BLAST of CaUC01G011570 vs. TAIR 10
Match:
AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 594.7 bits (1532), Expect = 7.1e-170
Identity = 287/477 (60.17%), Postives = 361/477 (75.68%), Query Frame = 0
Query: 37 SPNSSHHNISSKFTANSIDPIVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFI 96
+P HN S+ T V WTS + RNG+L+EAA EF+ M LAGVEPNH+TFI
Sbjct: 22 NPKIQRHNQSTSETT------VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFI 81
Query: 97 TLLSGCADFPSESLFFGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYL 156
LLSGC DF S S G LHGYA K GLD HVMVGTA+I MY+K + AR VFDY+
Sbjct: 82 ALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM 141
Query: 157 GVKNSVSWNTMLDGYTRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFH 216
KNSV+WNTM+DGY R+G+++ A +FD+MP RD ISWTA+ING +K GY E+AL F
Sbjct: 142 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFR 201
Query: 217 QMQCSGIEPDYVSIIAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCG 276
+MQ SG++PDYV+IIA L AC +LGAL+ GLWV+R+V+ Q+FK+N+R+SNSLID+Y RCG
Sbjct: 202 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 261
Query: 277 CIEFARQVFEKMPKRTLVSWNSIIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALT 336
C+EFARQVF M KRT+VSWNS+IVGFA NG A ESL +F MQ++GFKPD V++TGALT
Sbjct: 262 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 321
Query: 337 ACSHAGLVNKGLELFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNE 396
ACSH GLV +GL F MK +R++PRIEHYGC+VDLY RAGRLEDAL +++ MPMKPNE
Sbjct: 322 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 381
Query: 397 VVLGSLLAACRTHG-DVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRT 456
VV+GSLLAAC HG ++ +AERLMKHL L+ SNYV+LSN+YAA GKWEGA+K+RR
Sbjct: 382 VVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRK 441
Query: 457 MKARGVQKKPGCSSVEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDT 513
MK G++K+PG SS+EID +H F+AGD H + I +LEL+ +L++ G V +T
Sbjct: 442 MKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
BLAST of CaUC01G011570 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-109
Identity = 185/461 (40.13%), Postives = 293/461 (63.56%), Query Frame = 0
Query: 65 ARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYARKFG 124
+ Y R G EA F M +GV P+ ++ ++ +S C+ ++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 125 LDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELALDLF 184
++W + ALIDMY KC + A ++FD + K V+WN+++ GY NGE++ A + F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 185 DEMPTRDAISWTALINGLLKHGYSEQALECFHQMQC-SGIEPDYVSIIAVLAACADLGAL 244
+ MP ++ +SW +I+GL++ E+A+E F MQ G+ D V+++++ +AC LGAL
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 245 TLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSIIVGF 304
L W+ ++ + + ++R+ +L+DM+SRCG E A +F + R + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 305 AVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRVTPR 364
A+ G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F +M ++H V+P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 365 IEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMKHLF 424
HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+ SLLAACR G+V MA + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 425 KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFVAGD 484
L P +YVLLSN+YA+ G+W KVR +MK +G++K PG SS++I GK HEF +GD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 485 KYHTDADSIYSMLELLFHELKICGYVPD-TDIIMNTKESSK 524
+ H + +I +ML+ + G+VPD ++++M+ E K
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
BLAST of CaUC01G011570 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-109
Identity = 185/461 (40.13%), Postives = 293/461 (63.56%), Query Frame = 0
Query: 65 ARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLFFGSSLHGYARKFG 124
+ Y R G EA F M +GV P+ ++ ++ +S C+ ++ +G S HGY + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369
Query: 125 LDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGYTRNGEIELALDLF 184
++W + ALIDMY KC + A ++FD + K V+WN+++ GY NGE++ A + F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429
Query: 185 DEMPTRDAISWTALINGLLKHGYSEQALECFHQMQC-SGIEPDYVSIIAVLAACADLGAL 244
+ MP ++ +SW +I+GL++ E+A+E F MQ G+ D V+++++ +AC LGAL
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489
Query: 245 TLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPKRTLVSWNSIIVGF 304
L W+ ++ + + ++R+ +L+DM+SRCG E A +F + R + +W + I
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549
Query: 305 AVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKRVHRVTPR 364
A+ G A+ ++E FD M ++G KPDGV++ GALTACSH GLV +G E+F +M ++H V+P
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609
Query: 365 IEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTHGDVSMAERLMKHLF 424
HYGC+VDL GRAG LE+A+ +IE+MPM+PN+V+ SLLAACR G+V MA + +
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669
Query: 425 KLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSSVEIDGKVHEFVAGD 484
L P +YVLLSN+YA+ G+W KVR +MK +G++K PG SS++I GK HEF +GD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729
Query: 485 KYHTDADSIYSMLELLFHELKICGYVPD-TDIIMNTKESSK 524
+ H + +I +ML+ + G+VPD ++++M+ E K
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
BLAST of CaUC01G011570 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 375.6 bits (963), Expect = 6.7e-104
Identity = 172/476 (36.13%), Postives = 295/476 (61.97%), Query Frame = 0
Query: 49 FTANSIDPIVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSE 108
FT +V W S + + + G +A F +M V+ +HVT + +LS CA
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--R 248
Query: 109 SLFFGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTML 168
+L FG + Y + ++ ++ + A++DMY KC + A+++FD + K++V+W TML
Sbjct: 249 NLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 169 DGYTRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQC-SGIEPDY 228
DGY + + E A ++ + MP +D ++W ALI+ ++G +AL FH++Q ++ +
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 368
Query: 229 VSIIAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEK 288
+++++ L+ACA +GAL LG W++ ++ + + N ++++LI MYS+CG +E +R+VF
Sbjct: 369 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 428
Query: 289 MPKRTLVSWNSIIVGFAVNGFADESLEFFDAMQKEGFKPDGVSYTGALTACSHAGLVNKG 348
+ KR + W+++I G A++G +E+++ F MQ+ KP+GV++T ACSH GLV++
Sbjct: 429 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 488
Query: 349 LELFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACR 408
LF M+ + + P +HY CIVD+ GR+G LE A+ IE MP+ P+ V G+LL AC+
Sbjct: 489 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 548
Query: 409 THGDVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGC 468
H ++++AE L +L+P D +VLLSNIYA +GKWE +++R+ M+ G++K+PGC
Sbjct: 549 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 608
Query: 469 SSVEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSK 524
SS+EIDG +HEF++GD H ++ +Y L + +LK GY P+ ++ E +
Sbjct: 609 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
BLAST of CaUC01G011570 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 372.5 bits (955), Expect = 5.7e-103
Identity = 180/474 (37.97%), Postives = 292/474 (61.60%), Query Frame = 0
Query: 53 SIDP-IVQWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHVTFITLLSGCADFPSESLF 112
+IDP + +T+++ NG +A + ++ + + PN TF +LL C S
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC------STK 149
Query: 113 FGSSLHGYARKFGLDTWHVMVGTALIDMYAKCAQLGLARKVFDYLGVKNSVSWNTMLDGY 172
G +H + KFGL V T L+D+YAK + A+KVFD + ++ VS M+ Y
Sbjct: 150 SGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 209
Query: 173 TRNGEIELALDLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQCSG-IEPDYVSI 232
+ G +E A LFD M RD +SW +I+G +HG+ AL F ++ G +PD +++
Sbjct: 210 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 269
Query: 233 IAVLAACADLGALTLGLWVNRFVMQQEFKDNIRISNSLIDMYSRCGCIEFARQVFEKMPK 292
+A L+AC+ +GAL G W++ FV + N+++ LIDMYS+CG +E A VF P+
Sbjct: 270 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 329
Query: 293 RTLVSWNSIIVGFAVNGFADESLEFFDAMQK-EGFKPDGVSYTGALTACSHAGLVNKGLE 352
+ +V+WN++I G+A++G++ ++L F+ MQ G +P +++ G L AC+HAGLVN+G+
Sbjct: 330 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 389
Query: 353 LFDNMKRVHRVTPRIEHYGCIVDLYGRAGRLEDALNVIEEMPMKPNEVVLGSLLAACRTH 412
+F++M + + + P+IEHYGC+V L GRAG+L+ A I+ M M + V+ S+L +C+ H
Sbjct: 390 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 449
Query: 413 GDVSMAERLMKHLFKLDPGGDSNYVLLSNIYAAIGKWEGANKVRRTMKARGVQKKPGCSS 472
GD + + + ++L L+ YVLLSNIYA++G +EG KVR MK +G+ K+PG S+
Sbjct: 450 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 509
Query: 473 VEIDGKVHEFVAGDKYHTDADSIYSMLELLFHELKICGYVPDTDIIMNTKESSK 524
+EI+ KVHEF AGD+ H+ + IY+ML + +K GYVP+T+ ++ E ++
Sbjct: 510 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETE 556
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038877228.1 | 5.4e-289 | 93.13 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Benincasa ... | [more] |
XP_022142716.1 | 5.8e-275 | 88.93 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Momordica ... | [more] |
XP_008458940.1 | 1.5e-270 | 88.74 | PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic ... | [more] |
XP_004139593.1 | 2.5e-270 | 88.17 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sa... | [more] |
XP_022967078.1 | 3.9e-263 | 84.98 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9MA50 | 9.9e-169 | 60.17 | Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 2.6e-108 | 40.13 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 9.5e-103 | 36.13 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SZT8 | 8.0e-102 | 37.97 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
O23337 | 5.2e-101 | 37.02 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CN07 | 2.8e-275 | 88.93 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Momordic... | [more] |
A0A5A7UJB6 | 7.2e-271 | 88.74 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3C956 | 7.2e-271 | 88.74 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucumis ... | [more] |
A0A0A0LYD6 | 1.2e-270 | 88.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169950 PE=4 SV=1 | [more] |
A0A6J1HU31 | 1.9e-263 | 84.98 | pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT1G05750.1 | 7.1e-170 | 60.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 1.8e-109 | 40.13 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 1.8e-109 | 40.13 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT2G29760.1 | 6.7e-104 | 36.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37380.1 | 5.7e-103 | 37.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |