CaUC01G011420 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G011420
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 18820557 .. 18830260 (+)
RNA-Seq ExpressionCaUC01G011420
SyntenyCaUC01G011420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCCGCACTTGCAAAGACCGTGTACAATTGCCATATAAGCGATCCTGTTTGGGGAGCAACCTTTTTGCTGCATTTCATTCCAAAGCATTTCGGCATCGTCAGGCCTTCCAGAATTGCAACATCCATCAATCAAAGTCGTGTAAGTGATGATGGTCGGGTCCCTGTTCTCTTCATTCATTTTGGAAAGAAGAAGGATGGCCTGATCAATATCACCACTTTTGCACCATCCATCAATAAGAAGATTATAGGTAACAATTGAAGGGACAAGCCTTGCCACTATCATTTTGTTTAGTAAATTGTGGGCTTCGTTAACTTTTCCAGCTTTACAAAAGCCATTTATCATTATGTTATAAGAAACCACATCTGGACGATAACCACGAGTACAAATGTCTTGGAACATCTCAAAAGCACGATCCACTTCGTGAATCTTGACTAGCCCATCCATGGCAGCAGAGTAGGCAACTATATCAGGCAGGAAGCCTTCACAAACCATACCAGCAAGAAAATTACAAGCTTCAATAACTCGCCCATTCTTACACATTGTTTCACAAGGAGTGTAGAATGTTTTATCCATGGCTCGTGCCCATGACCCCGCATCTCCCTCAATAATTCAATGGCTCCTACAATATCCTCTCTCCTACATAGGCACCCAAATATTGAATTATGGGTAAAATGAGTCGGCTGAAGTCCCGATTGTTCCATGTCTCTCAAAAGCTTATAGCTTTCTTCCAAGTAAATAACATGCACTCTCTACTTTTCCAGCATTAACAAGACATTTCAACACACTATTGTAAAGCAAGATCATACCTTCATAACTTATGTCTTTTGGTCTTTCCCCAAGTAACATGATTACAACTCTTTCTTCAGAAGAAGATGCTATCAGCTTTGCAAGTATCTTAACGTCAGGCATAATTCCAAACAACTTCATCTTCCAAAACAAAGCCATTGCTTTCTCAAATGCCCCCTTCTTACAAAGTCCTCCTATTAGCACATCATACATTGAAATATCAGGAGTAAAATTCAGTTTCAGCATTTTCTCAATCAACTTAAGAGCCATATCCTCCCTGGATTCCTTCACAAAACCATGAATCAATGCATAGAATGTCTTTTCATTTAACCCAAGATTTTGATCTCCCATTCTGTTTATGAATTGCATTACTCTATCTACCTCACCCCACTTGCTAAAAGCTAATGCCAAGATAGAAAAGACATACCCATCAACCCACCCTCTCTCATGCATATACACAATTAGAGCTTTGTCAAACTTTCCAGCATTGCAATAAGCCTTCAAAACAAGTGTCAATGTGTACTTATCCACTTCCCACCCGAAATCTTTCATCTCCCTCAACCTGTTCTCGATGGAATCAATAGCATTTGCCTTGGACAAAATTTCCAACAAACAGTTATAACTATAACTATTTGGAACACAGAGACCCATTGATCTAACCTAATAAAACAAAAAGTTAGCTTCCTCAACCAACCCCACGCTTCCAAAACTTCTTAAAAAGACTCCCAAAGCTCGAGGGGTCATCGAACAACGAAAGTTAAGGACATCCATAGCAATGGCTCTTAGTGGGGTGTTTTGTCGAGCATGTGATAGGATTGATGCAATGGCATTGAAAGCATAACAATTATGCCTGTCCCCATGTTGTTTTAAGGCTCAAATGAAGAACCTATGAGCAACTCATGTTGTTTTGATGTCTTTCTTCCAAACAGAAAGTTAGAGAAGTTTCTGGAGTAGTTTGACTGTCTAAATTCCACTCAAGTCAAGGTTGATTCCTTGCTGTTTGGCCATCCATTGGTGGAAGAAATAATCTTCATGTTGCTGCCGGTTTTCGCAACTATGGTTGGTTAATTTTTTTGGAAATGGTGAAGGATTTTATTGACTCAGTCACTAAAAGTGGAAAAGTTCAAGATTCTTCTTCTTCAAATGTTCCAAAAGTTGATAAAACTGTTAAAGATAGATTCATCTCTCCTTCCGCTAAGAGAAGCTTTGCAGATCTAGTGAAGCAAAAGCCTACCACGAAGATTGATAAAGTTGATGCAACTAAGAACCATAAAACTACAACATTCTAGGTTAGAAAAGAAGAAGAAGTTGTGAATTCTTTCTTTGTGGTTTCAAAAGTAATGGCACATTATTCATGTGAAAAGATCAAGTTGGTTCTGGAAGATTATTGCCAGGCCAGAATTATTATCAATTCGTTCTTGATTGATAAAGCTACTTTCAAGTGTGTTGGGATACGCACGAATATTACTTCTTCTGGGAAATGGTCTGTAATTGGCAATGATCTGAAGCTCAAGTACGGTCCGTGCGCCGTTTTTCTTCTCGACCATGACGAATCAATTGATTTAATGTAGGCATCGCTCTTTCCTTTTTCCTTCCCCCCTCTTTTTAGGGAGACATTGAGTCTGCATGAGAAAGATAGAATGTCACACCCCATCCCGAACTACCCTTATGTAGCACGAGATGGAGCTTGAGGACAGCAATCATCAACTTTCTTTATGATTTCCACTGTCAGCTTACCATATTTCCCTTCCATTAAACACTTTTTCTAGGACGATAATACCGTTATCGCTTGACAAACCTCGACTTTGACTGGCAACGGGAATTGTCATGCTACCTGAAAATGGAAAACATATAAAAGAATGAGCTAACGGCTCAGTGAGTAACCGTTTTTTTAAATAACTTATTTTAACTGTGAAACTGGTCATTCTAAATGATTCTAATCATGTTAATTTATACTCAAACACCATTATTAAGTTTTGCATGCTTATTTCTGGGAAATACTCAAAGATCATTCATTTCTAATCATTTTCCTTAGTTGAGGCGGAGCATTGCTTCTACGCTTCTCAATGTCAAATTCATTCCTTATCTTTTCCTTATTGAGGTGCTAGCGCTACTCAACATCGATTATCCTTAGCTATGTGGAGTAATCTCAACACATCGGCGTCGTATATATATATATTCTTCTATGTGCACATAGATAGTATAACCCGGGCTGCCCATATGCCTTCCTTTTCTCCTTGAGCATTGGGTCCCATTTCTATTTTCCGGCTACCCAGCCTTCCTCTAGTCCTTGAGCTTTAGGGTGCCATGTCTAAGAATTTATAAAATTCACTATGTTCTAGATACATCATCTATGATTAGCAATATGCTTTCCAATGAAAATCTTGTATTATCAATAGCATGCGTCTTACTAAACTCATTTCTAATACTCAGCATACTTGTGAGCTTTCTATAAATAACGCATGCTCTCAGCTTGCTCATGTGCTTTTATATATATAAACGCATGCTCTCATTTCTATAACCAACATATTCATGTGCTTTATATATATGTAAACGTATGCATTAATTCATTAGAAACCCATAAAATCATATTCATAAAGAACTCATCTATATTTTGAAAAACGCAAGTGTTACTCACCTGTACTTTGCTCAAGAATAATTCCTCTTCCTTCCCTCTATTTCCTCTTCCCGAGCTTCTTGGACGCAGCGTTCTAACTCAGAAACGCAAAGCTCCATATTCCTCTGTCAGCTCGGTTGGACGCAACCCTGCCCTTCAACGCAAGGTTGATAACTAGCACAAACCCTGCTCTTCAACGCAAGGTTGATTACTTCCGCAAAGTGCAGCCCAACTCTTCTTACTTCTCTTTTGGATGCGTCGACCTCTCTTGGACGCAAGGTCCAACTTGAACGCTTCACCTATCTTTCGACGCGGCGTTCACCTTGAACGTAGTATTTGTCTTTAACGCAAGGTCAATCCCCTTTCGACGCAAGATGATTTCTTTAACATAAGATAGCTAAGTTGTCAAGAATACCTTCTTTCCTGGCCGCAGACTCCTACTACGGACGCTAAGATTCCTCCTTTTTGCCTTCTTTCTTCCCTTTCTCTCCAGAATTCTTCTTTCAGAGTCATCAGTCGCTCATTTTCCTTCAAGGATTTATTTATAGGGATCTTACCATCCAACTTCTCCTCTCATTTTGCCACTTGTTTGCCACATGTCACGCTGCATGCTTAATTAACCATGCATTAATCCAAGCGTCACCTTGCATGAAACACTTAACATGCCTTTTTAACACCTCCTACTTTTAAGGTGTCAAGTCTATATGAAGCCACCTAGCCCTTATAAGCTTGTCCTATGCGTCCAACATTTTTCCAATAAACAACTATTCATTCAACACAACGCCCTCATGCATTCATTGAGTTTCCTTTAAGGTTTGAGCTTCATTATTTACTTCCCTATCTCTCGGCCATACTTCCCTTAAACTCGTTTTTCCATCGCACACTACTAGGCGTCAATATCTCAAACGCACACTACTATGCGTTTGTCTTACTGCGTAATACCATGCGTCAGCCTGAACCGCATACTATCATGCGTCCATGATCTTCCTCCTATCCTTGAAGATTCTTGATTACTCCTCTACGCGTCCTTGTGCTTGCAATCCAAGGTTATTCATTTAACCTTTTCCTTGTACTTAAAATATTTCTTTGATGATAGTTTAGTATGCGTCCACCTCTTGCTCCAATCTTTGAGCTTACTTCTCATCCTTCCACTTTATCCAACACCCAAGAAAATCCTTTGTTAATAGTCTATGCGTTACTCAGTTTGCTATAGTACTTTTCTTTCCAAGACACTTCACGACATAAGTTCATTTCTTTTCTTGCTTATGCATTTTACCATCACTAATGTTTACATCTTCATCATAATTACCTCCTATGCGTTACACTTCTTTTCCTTCAAGCTCTCGGGTTACTTCCATGCGTTCACCCTGACCATGCGTTACCTTAGTCCTGACCATGCGTCCAACATGATCTTTTACTACTTTTCTTTATAGATTCTTCAACGCATTGATTTTTAAAAGTAAGGTGTGACATAGAAGACTCCCCTGTACCTCTTTAGAGGAATGTATGGGTCAGTGACAATGGTAAACATGAAGTTTCTTCGGCAATGGTTTTTTCCTTGCAAGATGCTTGAGGGGACGAGTGTGTCTCAGCATTTAGACAAGATGGAGAAGATTTGAAAAGAATTTTGAGCTGTGAGAGTCAAAATTCCCTATACAAAAGAGTGATAAGTGACAGGGAAGTCCGCTGTCACCCCCCACCACGTTTACAGCTCTTTACCCCAACCCAACTGATGGAAAGCATCTCTCCTTAGCTTCTATTACCTGACCATGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCTGTCGACATGCAGTTAGCTCAAAACATGTTCTTCATGTGGCTAAGCAAAGTGCACCTGCACTTGTCTTTGTGAAGGATGAAGGTGAAGCAACCTAGCATCACTTTAGATAGGAGCAGATTGGATGACTTACAAGTGAGAGTGGACTGGATTGGTACTAAAGAGAAGATAATAGGATTTTGCCTCAATCGCAAAGACTCGACTCGGGGACTTCCCTTGTAGATTGGCGTCTTTTATAAGACATACAGACCATAAAGACCCCGAGGGTCAGGCTTGACAAAGGACCAAGGTTTGAGAGTGGATTTCGGCATGGATCTCCATTCCTTCGTTTGGTCCTCCCTCACTCCTTGTGAATGGGCAGAGCCAGGTGCTCTTATTTTATGACGGTAGGGATGATTGCTTCTATTACTGACCAGAAAGCCACCAAATTCACCTTTAGGTGCTTGCACTGCAAATGCATTTAAAAAAATGACTCTATTCGTTCTCATCCGGATGTTATTCAAAGTTGTGGAGGATGGATTAGCATAAAAACTTTGCTGTTAAAATACTGAAATGTGCTGTCTTTGAGGCCATTGGTCAGAATTTAGGAGGTTTAGGACGGACCTCTTCATCAACACTCAACGGTTTGAATTGCTTGGCTACTATTGTTCAGATTGAAAAAAAATTGTGTGGTTTTCTTCCAGCTGAAATTATAATCAAGGATACAAAGCTTGGGAATTTTTCCCTCATATATGGTGATATTGAACCGTTTGAAGATTCAAGTTTGATTTCTACCAATAGGGTTGCTTTATTGGCTAAAGAATTTTCATTTAATTTAAAGCAAATTATTGGATCCTATCCATCTCCCAGAAAGTCTTTTGATTAGAATTTGAAAAGCCATTTAAATAGGAATGTTGGCATTAATGAATTCGAAAAGGTGCCAATCAATTTGGATGAAGGGTTACAATTTTCAGATGGGGACCGCTTGGGTGGCTCTTCATATGCTATATTATCCCTTCAAGGGGTGAATTTAATGCTGCCAGATACGTCTAAAGAGAGAGAAAGGAGCGTTGAAGCTATTCAAGGTAAAGAAACTCATACTTCCAATGAGTATTTATCTCAACCCACATCTAATTGTCTTTCCAAGACCATTTAAATTACCCTCTAAATTCTCATCATTAGTGGTTGCCTGTGGATTTCAACTTCAGGAAATAGCTTCTCCTCAAACTGTGTTGCAACCATGAAAATTATTTGTGACATCGCACATTTTCAGGTGACTTTAAGCCATTTATCTTGAAGTAATTGGGTTAATCGTTGGATTTATAAGGTTTAATTGAATTAGGTGGAAAAATAATTCATTCAAAGTTAGCAGGACCGACTTTGGGGATTTTGTAATGTAATTTGAGATTTGGAAGTGTTTTCAAAGTGATGAGTTGGATTTTGGGGAACTTAGGTGAATAAGGGTTTTAAATGGGAAAATTTGTATGGGAAAAGGAAAATGAAAATTAATAAATGTTATTTTTTTTAATTATTATTTAAATTAGTTAGGGTTTGGTATTGGAGAAGTGAAAAGATTTAATTTATGTTTATAAATTTGGCTCCTCGGTTTGCATACAATAAAAAAAAAAAAAGGAAAAACCTTTTCTTCTCTCCAACCTCCCGCCGCTGCCGCCCCTTGGCATTCTCTCTCCTCAACCGGCGCCGCCCACCTTTGCTGCCAACGCTCCGTTCGTCACCGCTAGCCGCAGTTAGCTCGTCACCCCGTTGCCGTTTGACCGTCCATTGCCGGTTTTGCTCGCGCCGTCACTGCAGGGGTTCCAGCGTCGTCGCCACGAGTTCCAGTGTTGTCGCCGCGAGTTTTACATCGTTCTCTCTTCTCTTCTCGTCTTTGCGCCTGCCGACGCCGCCGTCGTTGACCAGCAACCTTCTGGGAAGTTTTCAGTTAGCTCTTTTTCCAAAAGCTTGATTGCTTCATCCCCTCTAGAAAAGGAGGTTTACCAAGCATTTTAGAAATCGAAGAGTCCTAAACGCATTAATGTTCTAGTTTGGATTATGATTATTGGAACTCTAAATTGCTCATCTACTTGGTAGCACAAGCTCCTGACACACTACCTCTCCCCTTCTATTTGCCCACTTTGTTTCACAAGTAGTGAGGATTTACGACCTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTACGCCCTTTTTTTTTTTTTTCTCTTTTTTTTTGAGTGCTCATTCTCCTGTTCCTGTTGGTGGAGTTTAGTCTCATAGTTTTGTTTGCAATGGGTCTTCGGAAGCTCTTTTTGTGAGAATGTTCTTCTAGTATTGGATGGTCCTTCATTATAATCTTAATCTCAAATTTTTTGGTTCAACGTAATTAAAGCTCTTCTATTAGAATAATGGTTTAAACGTAATCAGAGGGTATTCCATGAAATCATTAGCTTGGTTAGATCGTTTTGGTCTAGCTTGACTTCTTGGCTCATCATGGTGTCCTCTTTCCAAAGCTTTTGTTAATTATTCTTTCTAGGACATTTGCTTGAATTGGAATGCATTTATTGGCTTGATTTAGTTATTGTATTATTTTCTTTGTACCTTTTCTTCTACAGCATCTTGTATTTTTGTGCCTTAGACTCTTTTCATTATATCACTGAAAAGCTTATTTTTCTTTAAAAAAAGTACATGAAAATCTATTTTTAGTTTTGGTGTTCACTTTCAAATTATGTTTGTACTTTCCCTCTGTAATTGCACTCAAACTAAGATTTATTATAATAGTTTGTGGAGACTTATATTTCTCATCGTAACTTTTCACCTAAAAATGAGAAACTCTAATTTTTTGCAGAAAAAAAAAAATTGGTAGGTAATTTTGAATTGATCTATAGCAGGCTCTAATTTTGTTGTCTTTTGCAAACATTACACTTTGTCTCATCGAAAGGCTGATTCATCTCACCCGCTTCAACAACCAAGGCACATCATTCTTTTAATGAATGAATTATGAATTTGTAATATATGGACTATTTAATCAAACGTATTAGTTTCCTTTGCATTTTTAGCACACTTTGCTTGTAATAAATTAACTTCTAAGTTCATGTATGAACATCTGAGTTACTTCATTGCTAATTTTGCAGATTTTATTGCTAAACCTTCTTTGAAATCTGAATGAGAGAGCTCACATGGAAGAACCCAAAAAATGACTGGAATATGAGCTTCAGCTTTATTAAATGGAACTTGCATTTCTCATCTCCATTCCAATGGGGCTTTTCAGAACCACGGTTGCCAATCAAAGCCTTTGCAAGTCCGTCAATTTCACTAATTTTTTTGCCATTGCTTCGCTTATCTTCAGCAAAAATCTCTCCTATGGTTTGTCGACCTTATAGATGAATTTGTACAAAAGTGATCGATGTTCTTCCTTCTCTTGATGAAACCCATATCAGTAATAACTTCATTTCCCTCTTTAGCCAACAAAAATTTTCCCCTGGGATGCAAAAGCTCCATCAAATTTTCTTCAAGCTACCGTATATTCCATCAAACTTCTCTAACTTTCTTTTGGAAGAACGACTAACCTTCCTTTGTCATTGTCCCTGAAGTGCTTCCCACTTGAAACTGTTTGTTGGTCTCTATATTTCTCCACTGAAATGTATTACATGGCTGATCCTAAACATATTTTCTTTGCATTTGTTGTCTTTTCTCCATTTTATGTTTAACTTTGGTGGCCATTGTAACAACTTCTACTAAAGAACTTATTGGTTAAAGTTCCATGTGATCTTGAATTTCTTCTTTGAGGCAATCTATGAACCGCATGATTTGATAATTTTCAATTTCGTTTATTCTTGTTCAAGCCTCCAACCTATGGAATTCCTCTATTGATCGGCTACACTGCGATTCCTTTGTTTACACTTCTGATATTGTTGCCCAACAAAAATCTAGCTTTCATCATCCTTAACATTCGCGACTAACTTTTAATGGGGTTCTTTCCCATCGATCTTCGATTAAGTGAATATGGTCCCACCATGAAGAAGCTCTTGGTTTAAAAGTCATCAACTTCACCTTTTTATATTTTGGAGTATTCGTATAATTAAAGAAACTCTCTACACTCTTGGCCCAATCAAGAAAGGCTTCCAAATCAATTTTTTCGGTTAAATGTAGGCAAATCAATCTTCATCATTTGTAATCACTAGGGTGGTCCTCCCTCTCTTGAGCATCTCTCTCCTATTGTCTTTCTTCACAAAATCTTCAAATTAGTTCCCTTCATCCCTTGAAAAATCAGAATCTTGCTCATCCCAGTCTAGTTATTGCTTTCTTTATCCTTCTTGATTCGCTTGAATTCTCAATGGGGCATAGTAACATCCTCTATCAGGGGCATAGTAACATCCTCTATCATTAAATCTTTCTTTGTTGCTGATTTCAGGCCTCAACTCTTCCAATCATAGGT

mRNA sequence

CCTTCCGCACTTGCAAAGACCGTGTACAATTGCCATATAAGCGATCCTGTTTGGGGAGCAACCTTTTTGCTGCATTTCATTCCAAAGCATTTCGGCATCGTCAGGCCTTCCAGAATTGCAACATCCATCAATCAAAGTCGTGTAAGTGATGATGGTCGGGTCCCTGTTCTCTTCATTCATTTTGGAAAGAAGAAGGATGGCCTGATCAATATCACCACTTTTGCACCATCCATCAATAAGAAGATTATAGAAGAAGATGCTATCAGCTTTGCAAGTATCTTAACGTCAGGCATAATTCCAAACAACTTCATCTTCCAAAACAAAGCCATTGCTTTCTCAAATGCCCCCTTCTTACAAAGTCCTCCTATTAGCACATCATACATTGAAATATCAGGAGATTTTATTGACTCAGTCACTAAAAGTGGAAAAGTTCAAGATTCTTCTTCTTCAAATGTTCCAAAAGTTGATAAAACTGTTAAAGATAGATTCATCTCTCCTTCCGCTAAGAGAAGCTTTGCAGATCTAACCATAAAGACCCCGAGGGTCAGGCTTGACAAAGGACCAAGGAATGTTGGCATTAATGAATTCGAAAAGGTGCCAATCAATTTGGATGAAGGGTTACAATTTTCAGATGGGGACCGCTTGGGTGGCTCTTCATATGCTATATTATCCCTTCAAGGGGTGAATTTAATGCTGCCAGATACGTCTAAAGAGAGAGAAAGGAGCGTTGAAGCTATTCAAGGTAAAGAAACTCATACTTCCAATGAGAAAAACCTTTTCTTCTCTCCAACCTCCCGCCGCTGCCGCCCCTTGGCATTCTCTCTCCTCAACCGGCGCCGCCCACCTTTGCTGCCAACGCTCCGTTCGTCACCGCTAGCCGCAGTTAGCTCGTCACCCCGTTGCCGTTTGACCGTCCATTGCCGGTTTTGCTCGCGCCGTCACTGCAGGGGTTCCAGCGTCGTCGCCACGAGTTCCAGTGTTGTCGCCGCGAGTTTTACATCCTTTATTAAATGGAACTTGCATTTCTCATCTCCATTCCAATGGGGCTTTTCAGAACCACGGTTGCCAATCAAAGCCTTTGCAAGTCCGTCAATTTCACTAATTTTTTTGCCATTGCTTCGCTTATCTTCAGCAAAAATCTCTCCTATGCCAACAAAAATTTTCCCCTGGGATGCAAAAGCTCCATCAAATTTTCTTCAAGCTACCGCCTCAACTCTTCCAATCATAGGT

Coding sequence (CDS)

CCTTCCGCACTTGCAAAGACCGTGTACAATTGCCATATAAGCGATCCTGTTTGGGGAGCAACCTTTTTGCTGCATTTCATTCCAAAGCATTTCGGCATCGTCAGGCCTTCCAGAATTGCAACATCCATCAATCAAAGTCGTGTAAGTGATGATGGTCGGGTCCCTGTTCTCTTCATTCATTTTGGAAAGAAGAAGGATGGCCTGATCAATATCACCACTTTTGCACCATCCATCAATAAGAAGATTATAGAAGAAGATGCTATCAGCTTTGCAAGTATCTTAACGTCAGGCATAATTCCAAACAACTTCATCTTCCAAAACAAAGCCATTGCTTTCTCAAATGCCCCCTTCTTACAAAGTCCTCCTATTAGCACATCATACATTGAAATATCAGGAGATTTTATTGACTCAGTCACTAAAAGTGGAAAAGTTCAAGATTCTTCTTCTTCAAATGTTCCAAAAGTTGATAAAACTGTTAAAGATAGATTCATCTCTCCTTCCGCTAAGAGAAGCTTTGCAGATCTAACCATAAAGACCCCGAGGGTCAGGCTTGACAAAGGACCAAGGAATGTTGGCATTAATGAATTCGAAAAGGTGCCAATCAATTTGGATGAAGGGTTACAATTTTCAGATGGGGACCGCTTGGGTGGCTCTTCATATGCTATATTATCCCTTCAAGGGGTGAATTTAATGCTGCCAGATACGTCTAAAGAGAGAGAAAGGAGCGTTGAAGCTATTCAAGGTAAAGAAACTCATACTTCCAATGAGAAAAACCTTTTCTTCTCTCCAACCTCCCGCCGCTGCCGCCCCTTGGCATTCTCTCTCCTCAACCGGCGCCGCCCACCTTTGCTGCCAACGCTCCGTTCGTCACCGCTAGCCGCAGTTAGCTCGTCACCCCGTTGCCGTTTGACCGTCCATTGCCGGTTTTGCTCGCGCCGTCACTGCAGGGGTTCCAGCGTCGTCGCCACGAGTTCCAGTGTTGTCGCCGCGAGTTTTACATCCTTTATTAAATGGAACTTGCATTTCTCATCTCCATTCCAATGGGGCTTTTCAGAACCACGGTTGCCAATCAAAGCCTTTGCAAGTCCGTCAATTTCACTAATTTTTTTGCCATTGCTTCGCTTATCTTCAGCAAAAATCTCTCCTATGCCAACAAAAATTTTCCCCTGGGATGCAAAAGCTCCATCAAATTTTCTTCAAGCTACCGCCTCAACTCTTCCAATCATAGGT

Protein sequence

PSALAKTVYNCHISDPVWGATFLLHFIPKHFGIVRPSRIATSINQSRVSDDGRVPVLFIHFGKKKDGLINITTFAPSINKKIIEEDAISFASILTSGIIPNNFIFQNKAIAFSNAPFLQSPPISTSYIEISGDFIDSVTKSGKVQDSSSSNVPKVDKTVKDRFISPSAKRSFADLTIKTPRVRLDKGPRNVGINEFEKVPINLDEGLQFSDGDRLGGSSYAILSLQGVNLMLPDTSKERERSVEAIQGKETHTSNEKNLFFSPTSRRCRPLAFSLLNRRRPPLLPTLRSSPLAAVSSSPRCRLTVHCRFCSRRHCRGSSVVATSSSVVAASFTSFIKWNLHFSSPFQWGFSEPRLPIKAFASPSISLIFLPLLRLSSAKISPMPTKIFPWDAKAPSNFLQATASTLPIIG
Homology
[Close]
BLAST of CaUC01G011420 vs. NCBI nr
Match: XP_008452421.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 6.6e-08
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 334 SFIKWNLHFSSPFQWGFSEPRLPIKAFASPSISLIFLPLLRLSSAKISPM 384
           S  KWNL+FSSP QW FS+ RLPI+AF SPS SLI LPLL +S AKISPM
Sbjct: 18  SVTKWNLNFSSPLQWRFSKLRLPIQAFPSPSNSLILLPLLCISLAKISPM 67

[Close]
BLAST of CaUC01G011420 vs. NCBI nr
Match: XP_023554296.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.6 bits (135), Expect = 5.8e-04
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 334 SFIKWNLHFSSPFQWGFSEPRLPIKAFASPSISLIFLPLLRLSSAKISPM 384
           SF+K NL+   PF W F E RLPIKA  + SISLI L L RLSS KISP+
Sbjct: 18  SFVKRNLNIXFPFLWRFPESRLPIKASGNRSISLILLLLFRLSSVKISPV 67

[Close]
BLAST of CaUC01G011420 vs. ExPASy TrEMBL
Match: A0A1S3BTR3 (putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493457 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-08
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 334 SFIKWNLHFSSPFQWGFSEPRLPIKAFASPSISLIFLPLLRLSSAKISPM 384
           S  KWNL+FSSP QW FS+ RLPI+AF SPS SLI LPLL +S AKISPM
Sbjct: 18  SVTKWNLNFSSPLQWRFSKLRLPIQAFPSPSNSLILLPLLCISLAKISPM 67

The following BLAST results are available for this feature:
BLAST of CaUC01G011420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452421.16.6e-0872.00PREDICTED: putative pentatricopeptide repeat-containing protein At5g08310, mitoc... [more]
XP_023554296.15.8e-0462.00LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08... [more]
BLAST of CaUC01G011420 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC01G011420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BTR33.2e-0872.00putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS... [more]
BLAST of CaUC01G011420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G011420.1CaUC01G011420.1mRNA