CaUC01G011190 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G011190
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF1985 domain-containing protein
LocationCiama_Chr01: 18006475 .. 18008923 (+)
RNA-Seq ExpressionCaUC01G011190
SyntenyCaUC01G011190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGGGTATTGATTTGGAGCTACTGCATATGCGACTGAGTCACCCCAGTATATCTGCTATGTATGGAGCGACTGTGTATGGATCACTAGCTAAGGCTGGCTTAGATGGGCTTGACTTAGGCAGCTTAATAGATGGCTTAATATGCATAATCTACTAAATCCACCTAAGCCTAGTTCACTAAGTCAACTGCCTATACCCCAGTTCCTTTCCCCACCCGAGTATGTATTTTGCACCTTCTCAAAAATTGATGGCATTAAAAAAGCTTTATACAGTGAGTAACCCAGATAATAATAGGATAATGCAAGATTTCAATGAGAAAGTATACAGTAGGATCTTGGTATGGGTTGACTAATCATAAGTGGATATGTTGTTAGCTTTACAGGAGATAGGTATGGAAGCCACAATGAGTATATATCTAGGTATGCTTCTAGATAAGGAACTAAACGTCACGCCATAAACGAAATACCTATCCTTCGCTTTATCGGGCGCATGAGAGAACGAAGGAGAGCATTAAGCCAATAAGTCAGTCCATTCAGCAGTTTCCATGAGAGAAAAAGCGACATCATTGACTCCAGATAAGTAAGCGAAGGACCGTCGGTAAGTTGCTTCAGTATCGACTGCGTTCCTTATCTATCGTGGAGCTCGGTAGTATTTGCAATATTAGTCTCAATAGCGGCAATCTCATATACAGCTTAGGAAAATATCGTTCTAGCCATGCATAGAAGTAATGGATCGGGAATTCCACATTGCATTGACCTGGACCCTCTTTCTCTTGAGCAACAATGCCCAAACCATAATAAATGCTGGCAAGGACAGCCGAAGCTATGGCTACTTTTTTTCCCCGCACCAAGAACCCAACCATGAAAAATGTTTCTGAGCGAATGACGCTGGACGTTGTTGCGATTGTTCGGAAGAACAAAGCAGCTCAACTAGAGAGCCAATAACGCGGCTAAGTCGTCTCACTTGAGAATTTCGGAGTTGGGCTTCACAACAACAGTGTAAGAGACCTAGTTAAAGATATACGAGCCTATTAGTAGACTATTAGTAGGATTATTAGAAGGGGCATATTGGTAATTAGATTGGAAGTTTGTTATGGCTTTTAGTTATAAACAGAGGGAGTGGGTTGAGAGGAAAAGGATGTGAAGAATTATGTCGGATTTTCTTAATTGGGAATTTGGGAAAGTGTAGCCCTCCTGAAAGGCTAGTGGTTACGATTGTTTTTCATATATTTTCATGTTTCAATGTTCTTGAGTGTGTTCGTGTTAGGGTGTGTCTTAACAAATTTGTATCAAAGCTCGTTCTTTCTTGGGTACTGGTTTTTGTTTGGCAATGGGGGAAGAAACACCATGAACATGGGAGCGAGCACTCATATATGGATGGTTGATCAGAAACATGAGGCAACAGAGAGAGGAGAAACTTCATGGACATGGGAGCAAATGCAGAAATGGATGGCAGAGAAGAAAAGAAAATGGTGCAAAAAACAATTGAAGAGAGGTTGGAGGATCTAGACAGACAGAGGGAAGGTTAAGATCAAAGAAACGTTGCAGACCCTACTTCAAAGTATAAAACAGTTGAATGTTGAAATTCAGAAGAGCATACTTTCAAGGGAAGAAAATCAGGAAATGTTGGTGACAGGAGTCGAATCAGAAACTACCAGTGAGCTTACAATCAAAGGCTTGTCTATGGAAGGATCTTCACTTGCGTCGAAAGGCATCGAGGAAGAAGGAATGGTGTTTGTTCCAGCAAGCTCCATCGAGAGCAAATCAACACTGATGATAAACGAGAGAGAGTGAAACCAATGGAACCTACGGGAATGGGGAGTTACGATCAATAAAAACAAAAGAAAAGAAAGGGAGGTGATGAAGGGTTGCAAGGCAGTGGAGAAAACAAGGATGGTGACTAGACGATGGAGGAATCGAAGGAAAAATGGTCACAAAGAAGACAAAAAAAAAAAAGAAGCATCACCTCATTATGAGTGTCCATGGTTGGTGACGAGGAAGGTTGAGATGGTGGGGTACAAGTACGTGGTGGAAGTGGAAACGCCGACAGTTCATTGGTTGGGATGGCAAGGAGACCGATAGATGGAGAAACGACGATGGACAAAAACAATAGCAGGTGAAGTAGGGGGAAGATACGGTGGTTGGATAGGCTGAAAATTGAAAAGAATGGGGGCAATCGTTTACATATAAGAATTAAGAAAGTTGGAGAAGGAGGCTTGGGAAAGAGAAAATTTTGGTGAAGATAGGAAAAAGATTTCATAACCACATAAAGTGTCAGGAGGTGGGACCAGAGGTTTGGAAAAGGAGGCATCATTGATTCTGTGAGGGTTTTTGGGTTGGGATTGTAGGCCCACTTCTTTTTGTTTAAGGAGAACAAACTTAGCAAGGAAGAGGAGTCAGATACGTGTGAAAAAGGAAAGGAAAAAGAGTTCAAGAAATGGGCTAGGGCC

mRNA sequence

TTGGGGTATTGATTTGGAGCTACTGCATATGCGACTGAGTCACCCCAGTATATCTGCTATGTATGGAGCGACTCTTAATAGATGGCTTAATATGCATAATCTACTAAATCCACCTAAGCCTAGTTCACTAAGTCAACTGCCTATACCCCAGTTCCTTTCCCCACCCGAGTATGAGATAGGTATGGAAGCCACAATGAGTATATATCTAGGTATGCTTCTAGATAAGGAACTAAACATAAGTAAGCGAAGGACCGTCGGTAAGTTGCTTCAGTATCGACTGCGTTCCTTATCTATCGTGGAGCTCGGTAGTATTTGCAATATTAGTCTCAATAGCGGCAATCTCATATACAGCTTAGGAAAATATCAAGTAATGGATCGGGAATTCCACATTGCATTGACCTGGACCCTCTTTCTCTTGAGCAACAATGCCCAAACCATAATAAATGCTGGCAAGGACAGCCGAAGCTATGGCTACTTTTTTTCCCCGCACCAAGAACCCAACCATGAAAAATTTATAAACAGAGGGAGTGGGTTGAGAGGAAAAGGATGTGAAGAATTATGTCGGATTTTCTTAATTGGGAATTTGGGAAATGTGTTCGTGTTAGGGTGTGTCTTAACAAATTTGTATCAAAGCTCGTTCTTTCTTGGGTACTGGTTTTTGTTTGGCAATGGGGGAAGAAACACCATGAACATGGGAGCGAGCACTCATATATGGATGGTTGATCAGAAACATGAGGCAACAGAGAGAGGAGAAACTTCATGGACATGGGAGCAAATGCAGAAATGGATGGCAGAGAAGAAAAGAAAATGGTGCAAAAAACAATTGAAGAGAGACAGAGGGAAGGTTAAGATCAAAGAAACGTTGCAGACCCTACTTCAAAGTATAAAACAGTTGAATGTTGAAATTCAGAAGAGCATACTTTCAAGGGAAGAAAATCAGGAAATGTTGGTGACAGGAGTCGAATCAGAAACTACCAGTGAGCTTACAATCAAAGGCTTGTCTATGGAAGGATCTTCACTTGCGTCGAAAGGCATCGAGGAAGAAGGAATGGTGTTTGTTCCAGCAAGCTCCATCGAGAGCAAATCAACACTGATGATAAACGAGAGAGAGGAGGTGATGAAGGGTTGCAAGGCAGTGGAGAAAACAAGGATGGTGACTAGACGATGGAGGAATCGAAGGAAAAATGGTCACAAAGAAGACAAAAAAAAAAAAGAAGCATCACCTCATTATGAGTGTCCATGGTTGGTGACGAGGAAGGTTGAGATGGTGGGGTACAATGGAAACGCCGACAGTTCATTGGTTGGGATGGCAAGGAGACCGATAGATGGAGAAACGACGATGGACAAAAACAATAGCAGTTGGAGAAGGAGGCTTGGGAAAGAGAAAATTTTGGTGAAGATAGGAAAAAGATTTCATAACCACATAAAGTGTCAGGAGGTGGGACCAGAGGCCCACTTCTTTTTGTTTAAGGAGAACAAACTTAGCAAGGAAGAGGAGTCAGATACGTGTGAAAAAGGAAAGGAAAAAGAGTTCAAGAAATGGGCTAGGGCC

Coding sequence (CDS)

ATGCGACTGAGTCACCCCAGTATATCTGCTATGTATGGAGCGACTCTTAATAGATGGCTTAATATGCATAATCTACTAAATCCACCTAAGCCTAGTTCACTAAGTCAACTGCCTATACCCCAGTTCCTTTCCCCACCCGAGTATGAGATAGGTATGGAAGCCACAATGAGTATATATCTAGGTATGCTTCTAGATAAGGAACTAAACATAAGTAAGCGAAGGACCGTCGGTAAGTTGCTTCAGTATCGACTGCGTTCCTTATCTATCGTGGAGCTCGGTAGTATTTGCAATATTAGTCTCAATAGCGGCAATCTCATATACAGCTTAGGAAAATATCAAGTAATGGATCGGGAATTCCACATTGCATTGACCTGGACCCTCTTTCTCTTGAGCAACAATGCCCAAACCATAATAAATGCTGGCAAGGACAGCCGAAGCTATGGCTACTTTTTTTCCCCGCACCAAGAACCCAACCATGAAAAATTTATAAACAGAGGGAGTGGGTTGAGAGGAAAAGGATGTGAAGAATTATGTCGGATTTTCTTAATTGGGAATTTGGGAAATGTGTTCGTGTTAGGGTGTGTCTTAACAAATTTGTATCAAAGCTCGTTCTTTCTTGGGTACTGGTTTTTGTTTGGCAATGGGGGAAGAAACACCATGAACATGGGAGCGAGCACTCATATATGGATGGTTGATCAGAAACATGAGGCAACAGAGAGAGGAGAAACTTCATGGACATGGGAGCAAATGCAGAAATGGATGGCAGAGAAGAAAAGAAAATGGTGCAAAAAACAATTGAAGAGAGACAGAGGGAAGGTTAAGATCAAAGAAACGTTGCAGACCCTACTTCAAAGTATAAAACAGTTGAATGTTGAAATTCAGAAGAGCATACTTTCAAGGGAAGAAAATCAGGAAATGTTGGTGACAGGAGTCGAATCAGAAACTACCAGTGAGCTTACAATCAAAGGCTTGTCTATGGAAGGATCTTCACTTGCGTCGAAAGGCATCGAGGAAGAAGGAATGGTGTTTGTTCCAGCAAGCTCCATCGAGAGCAAATCAACACTGATGATAAACGAGAGAGAGGAGGTGATGAAGGGTTGCAAGGCAGTGGAGAAAACAAGGATGGTGACTAGACGATGGAGGAATCGAAGGAAAAATGGTCACAAAGAAGACAAAAAAAAAAAAGAAGCATCACCTCATTATGAGTGTCCATGGTTGGTGACGAGGAAGGTTGAGATGGTGGGGTACAATGGAAACGCCGACAGTTCATTGGTTGGGATGGCAAGGAGACCGATAGATGGAGAAACGACGATGGACAAAAACAATAGCAGTTGGAGAAGGAGGCTTGGGAAAGAGAAAATTTTGGTGAAGATAGGAAAAAGATTTCATAACCACATAAAGTGTCAGGAGGTGGGACCAGAGGCCCACTTCTTTTTGTTTAAGGAGAACAAACTTAGCAAGGAAGAGGAGTCAGATACGTGTGAAAAAGGAAAGGAAAAAGAGTTCAAGAAATGGGCTAGGGCC

Protein sequence

MRLSHPSISAMYGATLNRWLNMHNLLNPPKPSSLSQLPIPQFLSPPEYEIGMEATMSIYLGMLLDKELNISKRRTVGKLLQYRLRSLSIVELGSICNISLNSGNLIYSLGKYQVMDREFHIALTWTLFLLSNNAQTIINAGKDSRSYGYFFSPHQEPNHEKFINRGSGLRGKGCEELCRIFLIGNLGNVFVLGCVLTNLYQSSFFLGYWFLFGNGGRNTMNMGASTHIWMVDQKHEATERGETSWTWEQMQKWMAEKKRKWCKKQLKRDRGKVKIKETLQTLLQSIKQLNVEIQKSILSREENQEMLVTGVESETTSELTIKGLSMEGSSLASKGIEEEGMVFVPASSIESKSTLMINEREEVMKGCKAVEKTRMVTRRWRNRRKNGHKEDKKKKEASPHYECPWLVTRKVEMVGYNGNADSSLVGMARRPIDGETTMDKNNSSWRRRLGKEKILVKIGKRFHNHIKCQEVGPEAHFFLFKENKLSKEEESDTCEKGKEKEFKKWARA
Homology
[Close]
BLAST of CaUC01G011190 vs. NCBI nr
Match: EXB52722.1 (hypothetical protein L484_022499 [Morus notabilis])

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-04
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 125 WTLFLLSNNAQTIINAGKDSRSYGYFFSPHQEPNHEK 162
           WT FLL N+AQT+I AGKD RSYGY  S HQEP H +
Sbjct: 15  WTEFLLGNSAQTVIYAGKDGRSYGYSLSLHQEPGHHE 51

[Close]
BLAST of CaUC01G011190 vs. ExPASy TrEMBL
Match: W9QS76 (DUF1985 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_022499 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-04
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 125 WTLFLLSNNAQTIINAGKDSRSYGYFFSPHQEPNHEK 162
           WT FLL N+AQT+I AGKD RSYGY  S HQEP H +
Sbjct: 15  WTEFLLGNSAQTVIYAGKDGRSYGYSLSLHQEPGHHE 51

The following BLAST results are available for this feature:
BLAST of CaUC01G011190 vs. NCBI nr
Match NameE-valueIdentityDescription
EXB52722.15.5e-0467.57hypothetical protein L484_022499 [Morus notabilis][more]
BLAST of CaUC01G011190 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC01G011190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W9QS762.7e-0467.57DUF1985 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_022499 PE... [more]
BLAST of CaUC01G011190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..292

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G011190.1CaUC01G011190.1mRNA