CaUC01G011120 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCATGCTACCAAAGCATCCAGCTCTCAAGTCGCAACCAACGACATTGTGACCCACGAGACAACCGAAGTCATCAATCCAGTGTTGAAGGATGGCTCGTTGTTGACCAGCTTCTCCTGGGTTGGCTCTACAACTCCATGACACCTAAAGTGGCCACACAGCTCATGGGCTTTGAATGA ATGGAAGCATGCTACCAAAGCATCCAGCTCTCAAGTCGCAACCAACGACATTGTGACCCACGAGACAACCGAAGTCATCAATCCAGTGTTGAAGGATGGCTCGTTGTTGACCAGCTTCTCCTGGGTTGGCTCTACAACTCCATGACACCTAAAGTGGCCACACAGCTCATGGGCTTTGAATGA ATGGAAGCATGCTACCAAAGCATCCAGCTCTCAAGTCGCAACCAACGACATTGTGACCCACGAGACAACCGAAGTCATCAATCCAGTGTTGAAGGATGGCTCGTTGTTGACCAGCTTCTCCTGGGTTGGCTCTACAACTCCATGACACCTAAAGTGGCCACACAGCTCATGGGCTTTGAATGA MEACYQSIQLSSRNQRHCDPRDNRSHQSSVEGWLVVDQLLLGWLYNSMTPKVATQLMGFE Homology
BLAST of CaUC01G011120 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 5.0e-05 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CaUC01G011120 vs. NCBI nr
Match: XP_038904321.1 (uncharacterized protein LOC120090675 [Benincasa hispida]) HSP 1 Score: 57.4 bits (137), Expect = 5.0e-05 Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of CaUC01G011120 vs. NCBI nr
Match: XP_038875135.1 (uncharacterized protein LOC120067668 [Benincasa hispida]) HSP 1 Score: 57.4 bits (137), Expect = 5.0e-05 Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of CaUC01G011120 vs. NCBI nr
Match: KAA0041209.1 (uncharacterized protein E6C27_scaffold128G001630 [Cucumis melo var. makuwa]) HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CaUC01G011120 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]) HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CaUC01G011120 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CaUC01G011120 vs. ExPASy TrEMBL
Match: A0A5A7TIP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001630 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-04 Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CaUC01G011120 vs. ExPASy TrEMBL
Match: A0A5A7VCS1 (Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00430 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of CaUC01G011120 vs. ExPASy TrEMBL
Match: A0A5A7UCB8 (Integrase core domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00710 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CaUC01G011120 vs. ExPASy TrEMBL
Match: A0A5D3D6E7 (Integrase core domain containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00230 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|