CaUC01G010330 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G010330
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RPM1-interacting protein 4-like
Location	Ciama_Chr01: 14949263 .. 14951204 (+)
RNA-Seq Expression	CaUC01G010330
Synteny	CaUC01G010330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGAAACCATCGAACTAAAATCGACTGATCAAAAAACTTTCAACCTCTTTACTCCTTACTCCTCCATGTTCCTCTCTTCTAACAATACAAACTTTTCCAAAACTCCGCCGTTGCCGCCGCCGCAGCAACCACAGAGCTGCCACAGCTCATGGCAGTGAGTGTTTTTTTTTTTTCCTTGTCTTTTTTTCATCAGCACAATTACCATCTCAAATTAAATCATATTAATTACTAATAGAAGAATGAAATTTGTATTAATAATCTTCAATTAATCAATCTAATGGGCAGGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAAAAATCAAACCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGCTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAATCATTTAATCGAGCGTGTGATCAAAATGCATTAACAACCATTCAAAATAGTTTTTAAGGTGTATTTTAAACTATTTTTATCAAAAAAAAGTTTAAATAAAAATAAATTTTTTTAAAAACATTTTTTTTCTCAATTCAATTTAAATGGCCCCTTGAAGTTGATGGTAAATACTTATGAATGATTTATCCTGATTATTTGGCCTTAGTTTCTAATTAATGAAAATTAAACTTATAAAAATTACTTTCATTTATCTATGAGTTTCATTGTTTTGATATCATATTTTACTATTGGTTTGAAACAACCAAACAAAAATTTTAAAACTAAAAGAAAATTAAAAGAGATGTTTTGCAAATATAAGAAAATAGCATTGTCTATTAGTGATAAATACTAAAAGACATCTATCAATGTCTATAACTGACAGACTATAACTAATAGATGATAATAGTCTATTAGTAGACCGTGACATTTTGTTATGTTTGAAAATATTTTCAGCAGTTTTGTCATTTATAACAATTACTTAAAATAAAAACTAAAAGTTAAATAATTACCAAATAGAGTTTAATTTTAACCTAACAATTTAGGTCATGACAAATTTAACAAGGTAACAAGATTCTTTGAACATTGGAATTAAAATGATAAATAGTAACAACATCACAAATTTAAACTTTTTAGATTGCTTTTTTATTTTTAACCACTTAATAAGTCAAATCAAAGCATACTTTAAAACTTATATTTGAAAGTGCCCTTTTCATGTCAATCCATCAATGTTTTTATTTATAAGATTTAGTAAATTATATAAACAAGTTTAACTTTTAAAATGATAGAAAATAAATTTTAATGAACTAAATATAATTATTTAAAAAATAGTAAAGAATTTGTCCGTTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACATAGAAAATAGTGGAAGTGTTTTGCTGATTTTCCACGATTTGGTTG

mRNA sequence

CTTGGAAACCATCGAACTAAAATCGACTGATCAAAAAACTTTCAACCTCTTTACTCCTTACTCCTCCATGTTCCTCTCTTCTAACAATACAAACTTTTCCAAAACTCCGCCGTTGCCGCCGCCGCAGCAACCACAGAGCTGCCACAGCTCATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAAAAATCAAACCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGCTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACATAGAAAATAGTGGAAGTGTTTTGCTGATTTTCCACGATTTGGTTG

Coding sequence (CDS)

ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAAAAATCAAACCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGCTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACATAGAAAATAG

Protein sequence

MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTTTATNTHMLLFMSKVKHIITAPRVHRK

Homology

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BLAST of CaUC01G010330 vs. NCBI nr
Match: XP_038895247.1 (RPM1-interacting protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.2e-93
Identity = 184/221 (83.26%), Postives = 194/221 (87.78%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRA G+ FDPNDPDTYPPAAV+NQ S P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+R      DYHQRR +GNSGSEKLSSERSGSDYALLKEAKQSGRKKK+S GAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 TPTTTV---GGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQ 180
           TPTTTV   GGKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSKSPQAVPPLMNQTKQ-PIAKTTTATNTH-MLLFMSKV 217
           IGGS +PQAVPPLMNQTK+ PIA+TTT   TH    F+SKV
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKV 216

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BLAST of CaUC01G010330 vs. NCBI nr
Match: XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-93
Identity = 183/221 (82.81%), Postives = 194/221 (87.78%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRA G+ FDPNDPDTYPPAAV+NQ S P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+R      DYHQRR +GNSGSEKLSSERSGSDYALLKEAKQSGRKKK+S GAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 TPTTTV---GGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQ 180
           TPTTTV   GGKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSKSPQAVPPLMNQTKQ-PIAKTTTATNTH-MLLFMSKV 217
           IGGS +PQAVPPLMNQTK+ PIA+TTT   TH    F+SK+
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKI 216

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BLAST of CaUC01G010330 vs. NCBI nr
Match: KAA0054298.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 8.6e-90
Identity = 179/219 (81.74%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ S P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTH-MLLFMSKVK 218
           S +PQ VPPLMNQTKQP+ +TT A T+T     F+SKV+
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKVQ 217

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BLAST of CaUC01G010330 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89
Identity = 178/218 (81.65%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ S P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTH-MLLFMSKV 217
           S +PQ VPPLMNQTKQP+ +TT A T+T     F+SK+
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 216

[Close]

BLAST of CaUC01G010330 vs. NCBI nr
Match: XP_011660296.1 (RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_007241 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 2.0e-86
Identity = 169/207 (81.64%), Postives = 180/207 (86.96%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S+P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNT 208
           S   Q+VP LMNQTKQPI +TT   ++
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSS 205

[Close]

BLAST of CaUC01G010330 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVV- 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  -NQKSNPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
             Q      +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S D YT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]

BLAST of CaUC01G010330 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-05
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S + +T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of CaUC01G010330 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-05
Identity = 54/219 (24.66%), Postives = 85/219 (38.81%), Query Frame = 0


Query: 8   SHVPKFGNWDSDDVPYTICFENARELRATGI-TFDPNDPDTYPPA------AVVNQKSNP 67
           +HVPKFGNWD +++ YT  FE     +  G   F+PNDP+  P A      A  +Q S  
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68  ADN-------------RRHH--DGRDYHQ--------RRAIGNSGSEKLSSERSGSDYAL 127
             N             R+HH  + R++H+        R        +   S   G+   +
Sbjct: 65  HHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDSHRSRNHGTSATM 124

Query: 128 LKEAKQSG---------RKKKNSIGAEGMSRFTPTTTVGG--KGNRNPRVRRNNEGEMMA 186
               K++           ++ N   AEG S    TTT     K  +  R   +     ++
Sbjct: 125 SSSVKRNSDNWLPQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQSSIS 184

[Close]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL
Match: A0A5A7UH42 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001090 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.1e-90
Identity = 179/219 (81.74%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ S P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTH-MLLFMSKVK 218
           S +PQ VPPLMNQTKQP+ +TT A T+T     F+SKV+
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKVQ 217

[Close]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL
Match: A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.1e-90
Identity = 178/218 (81.65%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ S P
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTH-MLLFMSKV 217
           S +PQ VPPLMNQTKQP+ +TT A T+T     F+SK+
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSKI 216

[Close]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL
Match: A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 9.5e-87
Identity = 169/207 (81.64%), Postives = 180/207 (86.96%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S+P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGD YTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNT 208
           S   Q+VP LMNQTKQPI +TT   ++
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSS 205

[Close]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL
Match: A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.9e-67
Identity = 149/222 (67.12%), Postives = 167/222 (75.23%), Query Frame = 0


Query: 5   KSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAA--VVNQKSNPAD 64
           KSSSHVPKFGNWD+DDVPYTICFENA ELRA G+TFDPNDPDTYPP A    N +SNP+D
Sbjct: 4   KSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPSD 63

Query: 65  NRRHHDGRDYHQR------RAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEG 124
            RRHH   D+H+R      R   +SGSEKLSSERSGSDY+LLKE    GR+KK + G +G
Sbjct: 64  RRRHH---DHHRRPREQPNRDRRSSGSEKLSSERSGSDYSLLKE--PGGRRKKINNGVDG 123

Query: 125 MSRFTPTTT-VGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTE 184
           +SRF PT    GG  N NPR RR NEGEM+ASVPKFGSWD RDPKSGD YTAIFNKVK E
Sbjct: 124 ISRFPPTAAGHGGNPNPNPRARR-NEGEMVASVPKFGSWDARDPKSGDGYTAIFNKVKME 183

Query: 185 KQIGGSKSPQAVPPLMNQTK-QPIAKTTTATNTHMLLFMSKV 217
           K+IGGS S QAVPPL NQTK QPI +    + +    F+SKV
Sbjct: 184 KKIGGSNSSQAVPPLTNQTKQQPIPQIVHGSTS----FVSKV 215

[Close]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL
Match: A0A6J1JVE9 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 130/216 (60.19%), Postives = 150/216 (69.44%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSNP 60
           MAG  SS HVPKFGNWD+DDVPYTICFENARELRA GITFDPNDPDTYPP        N 
Sbjct: 1   MAGANSSIHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPAAHNG 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 120
            +++R    +   +R AI NSGSEKLSSERSGS+YALLK++K++        G EG+SR 
Sbjct: 61  GEHQRRPRQQPNRERGAIMNSGSEKLSSERSGSNYALLKKSKEN--------GVEGISRL 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 180
            P   V G G  NP+        + ASVPKFGSWD +DPKSGD YTAIFNK+K EKQI  
Sbjct: 121 AP--AVAGHG-VNPK-------PVTASVPKFGSWDAKDPKSGDGYTAIFNKMKIEKQIAA 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNTHMLLFMSKV 217
           S +PQAVPPLMN+TKQPIA T T +      F SK+
Sbjct: 181 S-NPQAVPPLMNKTKQPIAHTNTTSG--FTSFASKI 195

[Close]

BLAST of CaUC01G010330 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-17
Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVV- 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  -NQKSNPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
             Q      +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDAYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S D YT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]

BLAST of CaUC01G010330 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG-SKSPQAVPPLMNQTKQPIAK 201
           +PKFG WDV DP S + +T IFNK + EK+ GG S SP    P  N+  + + K
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

[Close]

BLAST of CaUC01G010330 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S + +T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of CaUC01G010330 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S + +T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of CaUC01G010330 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDAYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S + +T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

The following BLAST results are available for this feature:

BLAST of CaUC01G010330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895247.1	2.2e-93	83.26	RPM1-interacting protein 4-like isoform X1 [Benincasa hispida]	[more]
XP_038895249.1	2.8e-93	82.81	RPM1-interacting protein 4-like isoform X2 [Benincasa hispida]	[more]
KAA0054298.1	8.6e-90	81.74	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-inte...	[more]
XP_008458983.1	1.5e-89	81.65	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_011660296.1	2.0e-86	81.64	RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Cs...	[more]

BLAST of CaUC01G010330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	2.9e-16	31.40	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	5.2e-05	57.58	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8S3M3	6.7e-05	24.66	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of CaUC01G010330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UH42	4.1e-90	81.74	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C9P5	7.1e-90	81.65	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
A0A0A0M0M0	9.5e-87	81.64	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69...	[more]
A0A6J1CND0	2.9e-67	67.12	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P...	[more]
A0A6J1JVE9	2.3e-56	60.19	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111490070 PE=4...	[more]

BLAST of CaUC01G010330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	2.1e-17	31.40	RPM1 interacting protein 4	[more]
AT2G04410.1	1.3e-06	46.30	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	3.7e-06	57.58	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	3.7e-06	57.58	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	3.7e-06	57.58	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 146..177 e-value: 1.0E-14 score: 53.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..78
None	No IPR available	PANTHER	PTHR33159:SF49	OS06G0636100 PROTEIN	coord: 5..212
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 5..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G010330.1	CaUC01G010330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane