CaUC01G009800 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGGTACAAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACCAAAAATATTATTTCTCAATGTGGGGTTACCACCCCAAAATGCTAGAATCTTCGATATGCTTTGCCTACAATTCTATTTCATATTAAATGATGATGTATACACTGGTTTTCAAATATGATCATAACACATTCTCTTTCTTAACAACTGCTTCACCCTCATTTTTAATCCTCTAAGTTACGACGAAATAGTTACAATTGTAAACACGCGATTATAGTAATAATAATTAGGTTATTTTAATGAATAAATCGTTTTCGTAATAATTATAGTCCCGAATGTTGTTTCTTTTGTTTCTAACGTTTCGACTTAATTTACCTCGTTCCATGTTTGATTTATTATAGCTAATGGGGTATGACAGCTCCCAACTTTGTTGTTGCGGTTTCTTCAAACGTTCCAAAAGTTGTCATTAAACTACCGTTATAGGCAAGATATAATAAATAAGAAGAAGAAACTCAAGTATTCTAGTTTGTCTCCTCTTAGATAATATTTTTATTATAGTGAACTAGCAATAGGAATGAACAATTAATCATTAATCCTTTTATCAAATAGATCAAGGCCACCTTTTAAGTACTTTTTTTATAAAAAATAATCCTTAGAAACGAAGTACATTGAAAAACCTTCAAAACCAGCACTAGAGGTTCCACGCTATGATTTGGATACACGATTTAGGTTTGTGGTAAGTTGATAAAAGAAGTTGAAATGTAGTTTTTGTAGACGAGTTTAGAGAGAGCATCTTTCAGAAAGAGGCCCCAATTTTTTCTTCCCCCCATGTGTCTAATTTCGGTGAATCAAGCCAGAATCTTGCAGAGCGCATTGTCGTCTCAATAATTTCTCCATGGCCTAGACGTTAATTTTTGGGCTTAAAACCTTTGTAATTTTAACCACGATCTACTCTGCCCTCGAATCTGAAAAACAGAAACATTTATATCAAGAAATTCACGCGAACTATAAATAAATTAGAATGTGTACCCTGCTATCACTCTAAATGGAATTATATAAAAAACTACTCACATTGTGATTGCCCTTGCTAACCTCGAAACTGTTTTCTCTTATTGCTTGTTTCATTTTTATATTCAGTTATCTTTAGATTACGTAGAAAAATTAGTCAAACTTGGAATCTATCTATCTCTCGTGCCTTGTCGTCATTCCTTTTGTACTTTTGTCATTTTAACTTCACAATATTTTACATGCCACCGAGGACATATACACAGTGCATCCAATTTGAGGTCCTTTCGAAAGTCATGGCCTTGTACCGTGGTGTGAACTATATGCATGCATGGCACATAATCACCTTCTGTTAGTTTTATTGTTGATATTTTATTTTCATTGATCATAGCAATCATTTAAAACGACGAAGTTCATTATTTTTATAATACTTATGCAAAATGTCTATTTCCTAACAATAAAGATTATTTATGTGCTTTCATACATACCATTATATTACCATGCAATATCGTTTGTTTGAAACGGCAGCAACTGAACGCTCTCTAACTGTGAAGCATCTAGAAGAAGATGGTTCATAGGAAATAGTTATAAAGAAAGGTCAAATTTCAAAGGTATGTATTTTTTAGGGTTGTAGAACCCCAAATAAGAAGCTCTTAACTAACTTAACGATAAAATTGCTTAAGTTAGATTTAAATCTAACGAACTTCTAGCAATTAACAAGTAAACTAGAACAACTCCACCTAAAGAATAAATAAAATTTCTATAACTAACTAAACTAGTTTAACAAATGCTTTTCTATAACTCCGCGTATTCAATTTAACGAGACTATATAAAGTATTGTTGATATCTTTTGCAAATATAGTCCAACTCCTTCTTCCTTACCGCCATACACATACGAGCATTGTTCCAAGCACGTTACAATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGGTACAAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACCAAAAATATTATTTCTCAATGTGGGGTTACCACCCCAAAATGCTAG ATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGTCCAACTCCTTCTTCCTTACCGCCATACACATACGAGCATTGTTCCAAGCACGTTACAATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGGTACAAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACCAAAAATATTATTTCTCAATGTGGGGTTACCACCCCAAAATGCTAG ATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGTCCAACTCCTTCTTCCTTACCGCCATACACATACGAGCATTGTTCCAAGCACGTTACAATGAAGAAAGGTTTTTCAATGAAAGACATGTGCCTTTTGGTGCTCGTGATGAGTGTGCTTGTCAATCAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTCGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAGGGTGAAGGAGCACAGACAATGCTATTGTGGGTACAAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACCAAAAATATTATTTCTCAATGTGGGGTTACCACCCCAAAATGCTAG MKKGFSMKDMCLLVLVMSVLVNQTQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNRVKEHRQCYCGPTPSSLPPYTYEHCSKHVTMKKGFSMKDMCLLVLVMSVLVNQTQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNRVKEHRQCYCGYKKNPKIQPYLQEDATKNIISQCGVTTPKC Homology
BLAST of CaUC01G009800 vs. NCBI nr
Match: KAF7112275.1 (hypothetical protein RHSIM_RhsimUnG0246000 [Rhododendron simsii]) HSP 1 Score: 131.7 bits (330), Expect = 6.3e-27 Identity = 72/185 (38.92%), Postives = 110/185 (59.46%), Query Frame = 0
BLAST of CaUC01G009800 vs. NCBI nr
Match: KAF7130467.1 (hypothetical protein RHSIM_Rhsim10G0070700 [Rhododendron simsii]) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-26 Identity = 72/185 (38.92%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of CaUC01G009800 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 4.7e-22 Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of CaUC01G009800 vs. NCBI nr
Match: PQQ12718.1 (non-specific lipid-transfer protein 2 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 114.8 bits (286), Expect = 8.0e-22 Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 0
BLAST of CaUC01G009800 vs. NCBI nr
Match: KAA3482479.1 (non-specific lipid-transfer protein 2-like [Gossypium australe]) HSP 1 Score: 111.7 bits (278), Expect = 6.8e-21 Identity = 73/202 (36.14%), Postives = 103/202 (50.99%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15 Identity = 38/99 (38.38%), Postives = 55/99 (55.56%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.0e-11 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09 Identity = 24/68 (35.29%), Postives = 35/68 (51.47%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22 Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy TrEMBL
Match: A0A314Z6G0 (Non-specific lipid-transfer protein 2 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_38710 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 3.9e-22 Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy TrEMBL
Match: A0A5B6WKY8 (Non-specific lipid-transfer protein 2-like OS=Gossypium australe OX=47621 GN=EPI10_004720 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-21 Identity = 73/202 (36.14%), Postives = 103/202 (50.99%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy TrEMBL
Match: A0A7J9E0E3 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_015362 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 8.1e-20 Identity = 69/192 (35.94%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of CaUC01G009800 vs. ExPASy TrEMBL
Match: A0A6A4L169 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18630 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17 Identity = 75/272 (27.57%), Postives = 110/272 (40.44%), Query Frame = 0
BLAST of CaUC01G009800 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12 Identity = 27/86 (31.40%), Postives = 46/86 (53.49%), Query Frame = 0
BLAST of CaUC01G009800 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 8.0e-12 Identity = 26/68 (38.24%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of CaUC01G009800 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11 Identity = 29/86 (33.72%), Postives = 44/86 (51.16%), Query Frame = 0
BLAST of CaUC01G009800 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10 Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of CaUC01G009800 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 9.8e-10 Identity = 25/68 (36.76%), Postives = 38/68 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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