CaUC01G009760 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G009760
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	Ciama_Chr01: 13130510 .. 13130914 (-)
RNA-Seq Expression	CaUC01G009760
Synteny	CaUC01G009760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAACCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGGTACTCCGGAAAAACAAATCTTAATCGAACCGATATTTGCCCAATGGATTCAATCCGCTCATGGTCAAACTTCATATGGCTTCGATGTACTTTTATCTTCAACAAGCGGCCCGACGTTCAATGCGGGTCGAAGCATATGGTTGCCAGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGGTCCCGGAGACTTCTTGGTTCATCATGCTATTGCTTTAGGGTTACATACAACTACATCGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCTAA

mRNA sequence

ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAACCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGGTACTCCGGAAAAACAAATCTTAATCGAACCGATATTTGCCCAATGGATTCAATCCGCTCATGGTCAAACTTCATATGGCTTCGATGTACTTTTATCTTCAACAAGCGGCCCGACGTTCAATGCGGGTCGAAGCATATGGTTGCCAGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGGTCCCGGAGACTTCTTGGTTCATCATGCTATTGCTTTAGGGTTACATACAACTACATCGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCTAA

Coding sequence (CDS)

ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAACCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGGTACTCCGGAAAAACAAATCTTAATCGAACCGATATTTGCCCAATGGATTCAATCCGCTCATGGTCAAACTTCATATGGCTTCGATGTACTTTTATCTTCAACAAGCGGCCCGACGTTCAATGCGGGTCGAAGCATATGGTTGCCAGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGGTCCCGGAGACTTCTTGGTTCATCATGCTATTGCTTTAGGGTTACATACAACTACATCGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCTAA

Protein sequence

MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

Homology

[Close]

BLAST of CaUC01G009760 vs. NCBI nr
Match: PHT27330.1 (Photosystem I chlorophyll a apoprotein A2 [Capsicum baccatum])

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 29  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 88

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 89  SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 148

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 149 TLILVKGALDARGS 162

[Close]

BLAST of CaUC01G009760 vs. NCBI nr
Match: YP_009945416.1 (photosystem I P700 apoprotein A2 [Sechium edule] >QOE55946.1 photosystem I P700 apoprotein A2 [Sechium edule])

HSP 1 Score: 270.8 bits (691), Expect = 6.4e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. NCBI nr
Match: QBK38981.1 (photosystem I P700 chlorophyll a apoprotein A2 [Schima superba])

HSP 1 Score: 270.8 bits (691), Expect = 6.4e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 373 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 432

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 433 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 492

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 493 TLILVKGALDARGS 506

[Close]

BLAST of CaUC01G009760 vs. NCBI nr
Match: YP_009571515.1 (photosystem I P700 apoprotein A2 [Mirabilis jalapa] >QBC68190.1 photosystem I P700 apoprotein A2 [Mirabilis jalapa] >QVL29722.1 photosystem I P700 apoprotein A2 [Mirabilis jalapa])

HSP 1 Score: 270.8 bits (691), Expect = 6.4e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. NCBI nr
Match: QTW91178.1 (photosystem I P700 apoprotein A2 [Bryocarpum himalaicum])

HSP 1 Score: 270.8 bits (691), Expect = 6.4e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot
Match: Q8S8X5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.4e-72
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot
Match: A0A334 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Coffea arabica OX=13443 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.4e-72
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot
Match: Q4VZN4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.4e-72
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot
Match: P06512 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Spinacia oleracea OX=3562 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.4e-72
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot
Match: P56767 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Arabidopsis thaliana OX=3702 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-71
Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNA+NENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL
Match: A0A2G2V2W6 (Photosystem I chlorophyll a apoprotein A2 OS=Capsicum baccatum OX=33114 GN=CQW23_33066 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.1e-70
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 29  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 88

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 89  SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 148

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 149 TLILVKGALDARGS 162

[Close]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL
Match: A0A221HRZ1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Polyspora hainanensis OX=182315 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL
Match: U3R6G8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Ipomoea splendor-sylvae OX=1393931 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL
Match: A0A218KG43 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL
Match: A0A0K1Z9H8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Convolvulus arvensis OX=4123 GN=psaB PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 270.4 bits (690), Expect = 7.8e-73
Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQT 60
           MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+T
Sbjct: 411 MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKT 470

Query: 61  SYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTT 120
           SYGFDVLLSSTSGP FNAGRSIWLPGWLNA+NENSNSLFLTIGPGDFLVHHAIALGLHTT
Sbjct: 471 SYGFDVLLSSTSGPAFNAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTT 530

Query: 121 TSILVKGALDARGS 135
           T ILVKGALDARGS
Sbjct: 531 TLILVKGALDARGS 544

[Close]

BLAST of CaUC01G009760 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 61/140 (43.57%), Postives = 79/140 (56.43%), Query Frame = 0


Query: 1   MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILIEPIFAQWIQS 60
           +L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I ++P+FAQWIQ+
Sbjct: 427 VLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQN 486

Query: 61  AHGQTSYGFDVLLSSTSGPTFNAGRSI-WLPGWLNAVNENSNSLFLTIGPGDFLVHHAIA 120
            H         L    + P   A  S+ W  G L AV      L + +G  DFLVHH  A
Sbjct: 487 TH--------ALAPGVTAPGETASTSLTWGGGELVAVGGKVALLPIPLGTADFLVHHIHA 546

Query: 121 LGLHTTTSILVKGALDARGS 135
             +H T  IL+KG L AR S
Sbjct: 547 FTIHVTVLILLKGVLFARSS 558

The following BLAST results are available for this feature:

BLAST of CaUC01G009760 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT27330.1	1.7e-69	97.76	Photosystem I chlorophyll a apoprotein A2 [Capsicum baccatum]	[more]
YP_009945416.1	6.4e-69	97.01	photosystem I P700 apoprotein A2 [Sechium edule] >QOE55946.1 photosystem I P700 ...	[more]
QBK38981.1	6.4e-69	97.01	photosystem I P700 chlorophyll a apoprotein A2 [Schima superba]	[more]
YP_009571515.1	6.4e-69	97.01	photosystem I P700 apoprotein A2 [Mirabilis jalapa] >QBC68190.1 photosystem I P7...	[more]
QTW91178.1	6.4e-69	97.01	photosystem I P700 apoprotein A2 [Bryocarpum himalaicum]	[more]

BLAST of CaUC01G009760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8X5	8.4e-72	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=...	[more]
A0A334	8.4e-72	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Coffea arabica OX=13443 GN=psa...	[more]
Q4VZN4	8.4e-72	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psa...	[more]
P06512	8.4e-72	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Spinacia oleracea OX=3562 GN=p...	[more]
P56767	1.1e-71	96.27	Photosystem I P700 chlorophyll a apoprotein A2 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CaUC01G009760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G2V2W6	8.1e-70	97.76	Photosystem I chlorophyll a apoprotein A2 OS=Capsicum baccatum OX=33114 GN=CQW23...	[more]
A0A221HRZ1	3.1e-69	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Polyspora hainanensis OX=18231...	[more]
U3R6G8	3.1e-69	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Ipomoea splendor-sylvae OX=139...	[more]
A0A218KG43	3.1e-69	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwicki...	[more]
A0A0K1Z9H8	3.1e-69	97.01	Photosystem I P700 chlorophyll a apoprotein A2 OS=Convolvulus arvensis OX=4123 G...	[more]

BLAST of CaUC01G009760 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00340.1	7.8e-73	96.27	Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	1.3e-24	43.57	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 107..125 score: 72.02 coord: 7..29 score: 80.81
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 1..134 e-value: 4.0E-51 score: 174.1
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..134 e-value: 6.3E-67 score: 228.1
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 1..134
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 1..134
None	No IPR available	PANTHER	PTHR30128:SF65	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2	coord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G009760.1	CaUC01G009760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0000287	magnesium ion binding