CaUC01G009680 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAATTTTTTCTCTAAATGGCCTATGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGAAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA ATGAAGAAAATTTTTTCTCTAAATGGCCTATGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGAAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA ATGAAGAAAATTTTTTCTCTAAATGGCCTATGGTTTTTGGTGGTTGTGATGGTGGTGGTTGTCAATGAAACTCAACAGGCGCAGGCAGTGAAATGCGACCCAAAAGAGCTAAGACCATGTCGTTTGGCCTTCAGAATGTCTATGAAGCCATCATTAGCTTGCTGCGACAAGGTGAAGGAGCACCAACCATGCTATTGTACATACATGAAAAATCCAAAGATTAAGCCCTATTTAGAATATGATGGCAGCAAAGATATCATTTCTCAATGTGGTGTATCCATCCCAACTTGCTAA MKKIFSLNGLWFLVVVMVVVVNETQQAQAVKCDPKELRPCRLAFRMSMKPSLACCDKVKEHQPCYCTYMKNPKIKPYLEYDGSKDIISQCGVSIPTC Homology
BLAST of CaUC01G009680 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 129.4 bits (324), Expect = 1.7e-26 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of CaUC01G009680 vs. NCBI nr
Match: KAF7130178.1 (hypothetical protein RHSIM_Rhsim10G0070600 [Rhododendron simsii]) HSP 1 Score: 99.0 bits (245), Expect = 2.4e-17 Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of CaUC01G009680 vs. NCBI nr
Match: KAG8373754.1 (hypothetical protein BUALT_Bualt11G0058000 [Buddleja alternifolia]) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of CaUC01G009680 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 97.8 bits (242), Expect = 5.4e-17 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CaUC01G009680 vs. NCBI nr
Match: GFP85330.1 (probable non-specific lipid-transfer protein akcs9 [Phtheirospermum japonicum]) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.2e-16 Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.8e-11 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.0e-10 Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 6.2e-08 Identity = 20/66 (30.30%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.2e-08 Identity = 20/66 (30.30%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 8.1e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.6e-17 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy TrEMBL
Match: V7BY08 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G002600g PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.9e-16 Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of CaUC01G009680 vs. ExPASy TrEMBL
Match: A0A6P6A5B6 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306313 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.9e-16 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of CaUC01G009680 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CaUC01G009680 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 8.5e-13 Identity = 28/85 (32.94%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CaUC01G009680 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 8.5e-13 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of CaUC01G009680 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12 Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of CaUC01G009680 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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