CaUC01G009580 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G009580
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	snRNA-activating protein complex subunit-like
Location	Ciama_Chr01: 12024824 .. 12033898 (+)
RNA-Seq Expression	CaUC01G009580
Synteny	CaUC01G009580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAAGAGACGGGGCTGGAGCTTCAGAGGAGATGACTGTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCTATATATGCACCCAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTATTCAAGAACTTCAGGTTCTTATATATTTTCTTAGAAACATGTCTTTTCACCTTTGTTTCTGTTCTAAATCTAATCCTTATTCTGGAGCAGAGTCTGGAGGCAGAGTTACACTTGGATTCATCTCAACTATGTGATGAAGATATTTCGTATGTAAATTTTTCTCCCCTGAATGTGCTCTGGTCATGGTTGAATTTGTTAATTTGCAACTACCATTCTACAGGATTGATGGGCTTAAGGTGTTTACTGAAGAACAATTATTGAATATGGCTTTGGAGGAATCATTGCAGGTTTGCAATCTGAGTGTCTCATATCATCTAGTGCATTGCTGTTAAAAGAAAACACTCAGTAAACTTTTCATCTGCCGTACTAATGCAGAGTGATGAGAATGCTAATAACCAGCCGGAGCTTCCAGAAGAAAATTTGAATGCTGGGGTGGTGAGGTATAGAATTGTGATTGTTATTTTAAACTTTTGAAGAGTGTTTATTTGAACATGGATTGACTTGGATTTCTGCTGTCAATTTTTGACATAGGCAAAGTTATTAGACTAACAGAAACAACATTTCTCCACATTCAACGCATTGGCAACTATTTTAGTGAAAATACAATTTACATTGTAGTTTGTACAGTCCCCTTCCCCAAGAATTTGATTGGCTAATTTATTGGAAGAGGAGACCAGAGAAGCGTAGAATAGATTTTGTAGATGGTAATACTTGTAAATGGTTCTTGCTCACAGAACACCCTTTTAAACAACACAGAGAGATCTTATGGCAGCATTTGTTTGAGCTACAATTTGGACTTTCTGGCATGAAAGTAACTCAAGAATTTTTCAGAATAAAGAAAGATCCTTGAAGAAAGTGATTGAATCATCTCTTTTTATGGCTCTTTATTGGTGCACAAATGTTCTTCCTTTTTAGCTCAACTCTTTGTTTATACAATCAGGGAAGTTCTTTATAATCCCTTTGGATGGGCCCTCCTTTTTTATATTTCAGTTGATTAATGAAATTTTTCCTATCAATAATAATAATAATAACGATAAACAATTTCGAATCTGGTTAATGAAGTTAACTAATGCAAACCTTGGGATGTTAATGTATTGGTGTTCTAATTAGCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACCTCTATGGTATTGTGGAGCTAAAATGTCAGAAGAGCCTGTGGTTCTAGAAGCAATCTTCCTTGCAAAGTACTTTTTGGTGGGTAGAATCCATATGGTTAGGTCTAAAATTTTCATTTTTATTTTGTGACATCTTCAGTTCTTCTAAGGAGTTAAATGGAATTGTTTAATATATATTCACATTCCTTCTGATTTATTTATAAATATTTATTTTTGTAAAAATAGTTAATTAACTCCAGGTTCACTTAGACTTGCGCATAAACTTGAGTTAGATACTAGGTTCATTATTTACTATTTTGAATGTTCTATTTTTCAAAATTGTCCATTTTACTTCATACTGTTTTTGGTGAAAAGTTCATTAATTCTTTTGAGGAACAATGGTATTCTTAGAGAAACTGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAACTTCCAATATTGAGGTATGCTGCTCATCTTTGCATTATGTCTTTTATTAGCTACAGTTATTTGTATGAAACTTGGTCAATTTTAATGATTTCTCATAAGACTTCTTTTTCAGAATAAGTAAACGAGTATCAACTGTACATTCTGTGTCAAGCTTCGCCATCTGACTTTTAATTTTTGATAAGTTTGTTATGCGGTGCTATTGAATTTTGTTGTCTTCCCATTACATTCAATTGGTACTTCTGATTGACTTCTATTAAGTTGGGTGGTTCTTTTCCTATTTTTATTTCTGGATATGAGGAATAAGGATACTGGCGCATGTCTCTCTTAATCATTTTATGGGGTTTTTACTTGACCCATATAACATTGAGAAGTTAAAAACTTACATGATACCAATAAAGGTTAAAATACCATTTTAGTCCTTGCACTTTGGGATTATAGTCCCTGTACTTTTAAATGTCCAATTTTTCTTCCAGTATTTTCAATAAATCTTAAATTTTTGTCTCATGCCTTTCTACTTCTTGTTAAAGATTCTAGTTTTCAATTTTATGAAAATGTTTATAGAAATATTGATAACATATGGATGTTGAAGGATATTTTGAAAAAAATTATAAATATAAAAATTTATAATAAGTTTATAAATTAACGAATTAACTTTTACTCTTTTAAAATAACTTTAAATTTCTTATTTTTAATTGGGCAAAAACTCTTTTTTGGTCCCTAGGTTTTGAGTTTAGTTTCCATTTGGTTCCTAAGTTTCAAAATGTTACACTTTTAGCCTAAGTTTTGTGTTTAATTTCTACTTGGTCCTTAGGTTTCAAAATGTTACATTTTTACTTTTGAGTTTCGTTTCAATTTGGTCTCTAGGATTCAAGATTTACACTTTTGACCTTGATTTTTCATTAAATACTAACTTTTCATCTTTGGTATTAATGTCTATTAATTAATTTTAAAAAATTAAATTAATTATAATTAAATTAGTTATCAGTAGTTTTTCATCAATATTAAAATCAATTAAAATTTTAAAATCTTTTACATCATAATTATTTTAAATTAGTCATCTGAAAGTTAACGTCAAATACCAATGTCAATGTGAGCATTAGTCTCTTCTCATTTTTTGAATGAAAAGTTTTGTTTTCCTTCAGAAAAAGAAAATACCAAAATGAGCTCTAGTAAAAACACAAGGCTAAAAGTGTAAAATATTGAAACCTAGGGACCAAACGAAAACTAACCTCAAGACTCAAGGGTACAAATGTAACATTTTGAAACCTAGGGGCCAAATGGAAATTGAACTTAAATTTTATGAGGAAAGTATAACATTTTGAAATCTATGGACCAATTAGAAACTAGACTCAAAATCGAGGGACAAATAGAGTATCTTTCCCTTATTAATATATATTTGTTTGAACAATAGAAAAAAAATTTCATCAATGAAATGAAAAGAGAGACTGATGCTCAAGAGATACAAAACTCCACAGAGGGAGAAACAAACAAGCAAATGAGAACAAAAATAGAACAAGTTTCTGTTAGGCCCCTAGTTTGATAAATAATAGGATTATTAGGGGAATATTAGTATGGTTATTAGAATGGGCATATTAGTAATTGGATAATAAGTTTGTTAGGGACTTTAGTTATAAATAGAGGGAATGGGATAGGAGCAAGGTGTGAAGAATTTTATGGGATTTCCTAATTGGGAATTTGGGAGAGGATTCTCAACTCTAGGTATTTTGTAATTTCTTCAGTGATATTGCAATATAATTCTATGTTTTAGATTTTTTGTTTATTCATTGTGTTCTTGAGTTCTTTTGTTAGGAGGTATCCTAACAGTTTCATAATCAGAAAAAAAAAAAAAAATGCAACATAAAAAAATGATCAAGTAACCAAAAGGCAAACTAATAAGGAAATAAAAGGGCTGTCCAGTTGAGATTGATGTCCTGAGAAGTCCTCAAAGATTCTCGAATTTCTTTCCAACCACAAACCTGAGAGTAAGGCTTTCACAACATTAATCCAAATAAGGTTTTTCCCTAATTAATATTAGGTCCACATTACCGTTATTTGTTGATATGTTTACTATAATTTGTCAAATTTTCTATGATATAATAGAAATGTTGATTCACCCTTCATGGCAATGTCAAACCCATGCACATATGAATAATGTCAATGGAAATGTCGACAGAGGGGTATCCAAAACCCTGTTTAGACACAACTAGCTATTGAGAAGAAGTTATCTTAGGGTATCAAATGCATATGAATGTCTTGATTCCTAATGTTAAGGTTCGACAAGGCATGCAAAAACTGGTTTGGATAACCATGGTTATTAAAAATAAATAAGTGGTCACATATACTTTGAATTCACAATCTGTTCATATGTCCCTCTGGAATTTTTGACCCATCTGTTCATATGTCAAGTATACCAGTTATGCAAAATCATTGTAATCTTGTGCTTAATTCTTATTTTTAATGCCTTCTCTCTCTCTCTCTCTCCCCCTCTCTTTTCTTTTTTAAAATTCTTTTAACTGAATTTTCAATACGTTACAATACTATTTCAGGAAAATTCTACTGCGAAGGTGGCTGAAATTGTAAAAATCAAACAAAAGCAGGATGCAGACAGAGCTGTTGTTAAATTACATGCTTTCAAGTTTGTGCAATGATTCCAAAAAGTTCCGTTCATGATATGCATAATATGTTAGGGGCTTATGATTAACACATTTATATATTTTTTTACAGGTGGAAGAAGGAAATTGCTAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAAGTCCTTGAGGTCTACAAATTCTTCTGCAAAGGTTCCTCATGTAGGGTTTCTCTGAGTTATTATTATTACTACGATTGACAAGTCCAATAATAAGATTTACTATTAATTAAAGTATGATGAATGCAATGCCTGGTTGGATGGCGTATGCTCTTTCATTATTTTTGTAATGTTAATTTTGGAGTCTTTGTCTATCTGGCTGGAGGCTGTTTGATATCATTTCACTTTTGCAACAATAGTGAGATGGATTTGCACTTATTAACCTTACTGTATTCTATTAGTTTTTATAGTATTTTTCAGAAATAGTCAGGTAGGAAGCCTTTTTTGTGCTGCAACTCAAATAAAGAAGAATCGATAACTTTATAGTTATGTTGGGTTTTGTGGATTCCAAATCATTTAGAAGACTTAGTTTGAAACTCGTTGGAAGGGTCTTTTCGAAGACTGGACTGAAACAAATGGAGAAAAGGAGCAAATGAGCGCTACAAAGTGTGTCAGAGCCAATCATTTTGAGAAGGAAGTGCCAAGATGCTAGAGCAAGGCAGAAAAAACTTCTCGGAGTGCCCTAGCGCTAGATCATGCAGTTGGCTGATCCTAGAGTTATCTTATTAAAATATTAAAATATCAATAAATAACGGTTATAGGTTATTGTTATTGAATATTCAAACATGCTAGTAGATTGTCACTTGGAGGATTTAGTATCATCCTTTTTATCCACTAAAATATTGCGTCTTTCAATATGCTTCTGAACTGGATACTATGTAAATCATAATAGGTGTATTTATGTTCTTTTGCTCATGTTTATATGTATATGCTGATGTAAGTACGTTGGTATAGGGTATATGCCTGGCTCTAGCATTGTGACGGTGTTTGCGAACTTTATTCTCAGACTCTCGGTGCATGAAAAAGGTGTTGATGGGTAGCTAGGAAGGGAAGAGTCAGAGTGTGTGCTTTGTTGTGGGGTTTATGGGGGAGAGAAATAATAGAATCTTTAGAGGAATTGAGAGAGTTGTGAGATATTTGGTCCATGTGAGATTTGATGTTTCTCTTTGGGCGTTGGTGGTGAATCCCTTTTGTTATTATTCGCTAGGTCTTATTTTCTTGATAGGAGCACCTTTCCTTAAGATTTCTTCCTTTTGTGGGCTTTTCTTTTCTATGCCTATTGTATTCTTCCATAGTTTCTCAATGAAAGCCGGTCTTTTATTTAAAAAAAAAAAACTTGGAAAGGACGTGTATAGAGCTTAATGGTTTTATGGGTAGCTAGGAAAGGATGAGTGCCTCTTGTAGTGAATTTAATGAGCAAAGTAAGATACCCTGAATTCACCTGATTTGGTGGCCAATTTGTATAGCCTTAAAAGTGGCGTGGAGGATGGGGTTCCAATTTCCAACACAATCTAGTGAATGACATATCCTGGCCAACAATAAGGGGGTAAAAGATGGTGTGATCTGTTCGACTTCTTCCTTTAAAACTAAATTGCTACAGGAAGGCATTTTATAGATTCACCCACTGCTATTAACAATTTTGCAGCCGAGTACCTCATTCTACCTTACCTTACTTTTCCTCTTTAATGAATTGGCCTTGTAACTGCTGAATGTTATGTTGGCCAACTAGAGCCACCCTACAACTGGAATGCATAATCTTAAATGTGGAGGCCTAGCATGAAATACACAAACTATTTGATAATTGATCCTTATAATTTGGTGATTCTTGTTTGATCATGCATTTCTTTTCTTGTATCTCCCTCTGCTGATAGGAATTGATAACATGTTAGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGGTTTACCATAAATCTCGCAAGATGGTGAAGGTATGCTTTTCTTTTTCTTAACAATTGTCAATTTAAATGGGTTTAGTACAAATAAATAACTATTGATGAAGACTTAGTCAAATCACGGTTGAGAAACAGTGATAACGTCTTTATTATTGATTTATTTCTTAGATATTAGGTCGTAAATGTTATGTTTCATTTCTTCCATTCTTCATTATTGTTGGTCAAACAGACTTTGTTACAGTAACATTCTTGTTTTTATGTATCAAGCTCACTATCAATATCTACTTCTCTTGATGGCTATATATATTGAAGAGGTATTGACAAGATAGTACCATGCTATAATAGGAAGGACCAAGGTTATAATTTATTTCTGGCTTCTAGGTGATCTCTCAATAAAGAAAAAAAAGAAACTTTAATTTTTTATGCTCTTTGTTTGCTTATGGATACTGTATTTGCATTGTGGAGCACAAGGAGTCCTAGAAAGCTAAATATTTTAATTTGGATACCATTCATGGAGGATGTTAGCTCTGCTGGGAGAATTCAATGAAAATGCCCTTACTTGGCAATTAATTTGAGCCTCTGTATTTTTCTCCTGTTGTTGAAAATATGGTGGTCTACCTTGAATGCTTTTCGGCATTTGAGTTTGCCACTAAAGACAATATCGTATACTTGTGGATATATCATATATGGGCTTAAAAGGAGAGCTAAACAACCAACATGAGCATTACTCAACAGTAGTGAATGTATACTTCATGTTGAAGCCCCATACCGGCACATTTCTTGTACTAAAAGATAGGAGAGCTAAGGAGTTATGGACCAATGTTGCAACTTGTATGTTGAGGAATAAACAAATCTGAAAAGATGAGAACAAGTTAATGGGGAGGAAAGATTAAAAATTATCAGAGGACAGATATTATGCCTCTTGGTGTCCAAGATTTTGATAGTTATTCTTCTAAATCAATTAACTCTAGTTGGGATACTTTCTTGTAGTACATTTATTGCAGATTTTTTTAATAAAAAAATACTTTAATGTCAATTAGAGCATAATTTAATTGGTTAAGGCATATAATATACCTTCGACTAAGGGGTCAAAGAATCTTCGAGCCCCAAGCTTCATTGAACTGTGAAAAAGAAAGAAAAGAACTTTTTTCTGGTTATTTAGATCATATGTATTTGACCTTCCTGTGATATTCTTCTTTACAGACTCAAGAGTTTTTGGCCCTTGCACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGACATGTTAATGGAAAAGGCTGCACAGCAAGATTCGTCTGGATATTTCCTCATAGAAGTAAGAAATTCGATGAGCCCTGTATTTCCCAAATTTGATTTTAAGTAACCGAATGCAGTCTTGTTTATATCCAGGATGTTTTCTGCAATGATTTGAGGAATCCATCCGCAATAGATTATAGCAAACCCATATTTGATTGGCTTAGAAACTCTGAGGATGAAGCACGTAAGAAATGGGAGTGCATAATAACTGGTGAATCGCAGCAGAAAAATTCAGTTGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTCAGATCAGTGAGCATGAACACGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGGTATATTGCTTATTTGGCTCTTCCATATGGTTTTTGTTTTTCATGTTCATTTTGCATAGATTGTGTGGTTTTCATTTCAAACTAAAAGCTAAAGTCATATGGCCTAATGATATGTGTTGTTGGTTCTCATAAGACTACTTTAATTACTGCCCTTAGTTGATTCCTTTCAAGTAGGATTCCCTTTTTATATTTCATCATTATCAATGAATCACACTTGTTTCTGTCAAAACAAAAAACTGCCTTGACTTTGGAGTAATCCTCATATACACAGGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCACCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTCAGGACCCGAGCTCAGAAATGCGATGTCTGTAACATTTACAGGGCTAAAAAGGTTACTCTTGACGACAAGTGGGCGCAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGAAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCAAGATTAGGTGGCTAGGTTGTTTAAGAATGCTTCTCACTGATGCCCAATTCACACATGAAAATGCCCTGGATATTCATGCTCATTGAGATTCATTCAACAGTTTTGATGATGTTGAGTTAGTTCTGTAAGTAGCCAAAGTCCAGTCATCTTGGCTGGTGCAACAACTCCAGAATTGGAGGCTAAAGGTGGAATGGTTACATTATTATTATTATTATTTTATTTATTTATTTGTTTGGGTTGGTTGTTTTGGGGAGTTTTGTGTAATGGGGGACTCTTCTTATAATGTGTTTTTATGAAAGGAAAGGTAAATTATTTTCTAGGGTAGAATACAAAATATTTGCTTACCTTTTATAGTGTGGGTGAAAATATCTCTTTAATTACTTTAGGAAATCATAAATTATCTGGAGATTGGTTTTTGTTCAATTTCTTTTATAGTTGCCAAGGTCAGAATTTCTGTTGACT

mRNA sequence

ATGGAGGCAAGAGACGGGGCTGGAGCTTCAGAGGAGATGACTGTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCTATATATGCACCCAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTATTCAAGAACTTCAGAGTCTGGAGGCAGAGTTACACTTGGATTCATCTCAACTATGTGATGAAGATATTTCGATTGATGGGCTTAAGGTGTTTACTGAAGAACAATTATTGAATATGGCTTTGGAGGAATCATTGCAGAGTGATGAGAATGCTAATAACCAGCCGGAGCTTCCAGAAGAAAATTTGAATGCTGGGGTGGTGAGTTCATTAATTCTTTTGAGGAACAATGGTATTCTTAGAGAAACTGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAACTTCCAATATTGAGGAAAATTCTACTGCGAAGGTGGCTGAAATTGTAAAAATCAAACAAAAGCAGGATGCAGACAGAGCTGTTGTTAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCTAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAAGTCCTTGAGGTCTACAAATTCTTCTGCAAAGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGGTTTACCATAAATCTCGCAAGATGGTGAAGACTCAAGAGTTTTTGGCCCTTGCACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGACATGTTAATGGAAAAGGCTGCACAGCAAGATTCGTCTGGATATTTCCTCATAGAAGATGTTTTCTGCAATGATTTGAGGAATCCATCCGCAATAGATTATAGCAAACCCATATTTGATTGGCTTAGAAACTCTGAGGATGAAGCACGTAAGAAATGGGAGTGCATAATAACTGGTGAATCGCAGCAGAAAAATTCAGTTGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTCAGATCAGTGAGCATGAACACGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCACCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTCAGGACCCGAGCTCAGAAATGCGATGTCTGTAACATTTACAGGGCTAAAAAGGTTACTCTTGACGACAAGTGGGCGCAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGAAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCAAGATTAGGTGGCTAGGTTGTTTAAGAATGCTTCTCACTGATGCCCAATTCACACATGAAAATGCCCTGGATATTCATGCTCATTGAGATTCATTCAACAGTTTTGATGATGTTGAGTTAGTTCTGTAAGTAGCCAAAGTCCAGTCATCTTGGCTGGTGCAACAACTCCAGAATTGGAGGCTAAAGGTGGAATGGTTACATTATTATTATTATTATTTTATTTATTTATTTGTTTGGGTTGGTTGTTTTGGGGAGTTTTGTGTAATGGGGGACTCTTCTTATAATGTGTTTTTATGAAAGGAAAGGTAAATTATTTTCTAGGGTAGAATACAAAATATTTGCTTACCTTTTATAGTGTGGGTGAAAATATCTCTTTAATTACTTTAGGAAATCATAAATTATCTGGAGATTGGTTTTTGTTCAATTTCTTTTATAGTTGCCAAGGTCAGAATTTCTGTTGACT

Coding sequence (CDS)

ATGGAGGCAAGAGACGGGGCTGGAGCTTCAGAGGAGATGACTGTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCTATATATGCACCCAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTATTCAAGAACTTCAGAGTCTGGAGGCAGAGTTACACTTGGATTCATCTCAACTATGTGATGAAGATATTTCGATTGATGGGCTTAAGGTGTTTACTGAAGAACAATTATTGAATATGGCTTTGGAGGAATCATTGCAGAGTGATGAGAATGCTAATAACCAGCCGGAGCTTCCAGAAGAAAATTTGAATGCTGGGGTGGTGAGTTCATTAATTCTTTTGAGGAACAATGGTATTCTTAGAGAAACTGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAACTTCCAATATTGAGGAAAATTCTACTGCGAAGGTGGCTGAAATTGTAAAAATCAAACAAAAGCAGGATGCAGACAGAGCTGTTGTTAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCTAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAAGTCCTTGAGGTCTACAAATTCTTCTGCAAAGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGGTTTACCATAAATCTCGCAAGATGGTGAAGACTCAAGAGTTTTTGGCCCTTGCACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGACATGTTAATGGAAAAGGCTGCACAGCAAGATTCGTCTGGATATTTCCTCATAGAAGATGTTTTCTGCAATGATTTGAGGAATCCATCCGCAATAGATTATAGCAAACCCATATTTGATTGGCTTAGAAACTCTGAGGATGAAGCACGTAAGAAATGGGAGTGCATAATAACTGGTGAATCGCAGCAGAAAAATTCAGTTGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTCAGATCAGTGAGCATGAACACGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCACCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTCAGGACCCGAGCTCAGAAATGCGATGTCTGTAACATTTACAGGGCTAAAAAGGTTACTCTTGACGACAAGTGGGCGCAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGAAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCAAGATTAG

Protein sequence

MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHLDSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILLRNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

Homology

[Close]

BLAST of CaUC01G009580 vs. NCBI nr
Match: XP_008459095.1 (PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo] >XP_008459096.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo])

HSP 1 Score: 849.0 bits (2192), Expect = 2.0e-242
Identity = 431/481 (89.60%), Postives = 451/481 (93.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG++ SLILL
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRSLILL 120

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
           R NGILRE EEEVNGHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+
Sbjct: 121 RKNGILRECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKL 180

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAK---VKSLSSGKHETLQ 240
           KQKQ+ADRAVV+LHAFKWKK+IASSSSESKERLKSLRSTN+SAK   VKSL+ GKHE+L 
Sbjct: 181 KQKQEADRAVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLH 240

Query: 241 HPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLI 300
           HP TVLFVEVYHKSRKMVK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+
Sbjct: 241 HPMTVLFVEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLV 300

Query: 301 EDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPH 360
           EDVFCNDLRNPSAIDYSKPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPH
Sbjct: 301 EDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPH 360

Query: 361 FRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQL 420
           FRSVSM+ VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQL
Sbjct: 361 FRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQL 420

Query: 421 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 479
           RTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ
Sbjct: 421 RTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 480

[Close]

BLAST of CaUC01G009580 vs. NCBI nr
Match: XP_008459093.1 (PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo])

HSP 1 Score: 849.0 bits (2192), Expect = 2.0e-242
Identity = 431/481 (89.60%), Postives = 451/481 (93.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 26  MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG++ SLILL
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRSLILL 145

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
           R NGILRE EEEVNGHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+
Sbjct: 146 RKNGILRECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKL 205

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAK---VKSLSSGKHETLQ 240
           KQKQ+ADRAVV+LHAFKWKK+IASSSSESKERLKSLRSTN+SAK   VKSL+ GKHE+L 
Sbjct: 206 KQKQEADRAVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLH 265

Query: 241 HPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLI 300
           HP TVLFVEVYHKSRKMVK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+
Sbjct: 266 HPMTVLFVEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLV 325

Query: 301 EDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPH 360
           EDVFCNDLRNPSAIDYSKPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPH
Sbjct: 326 EDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPH 385

Query: 361 FRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQL 420
           FRSVSM+ VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQL
Sbjct: 386 FRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQL 445

Query: 421 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 479
           RTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ
Sbjct: 446 RTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 505

[Close]

BLAST of CaUC01G009580 vs. NCBI nr
Match: TYK17049.1 (snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 837.8 bits (2163), Expect = 4.7e-239
Identity = 435/521 (83.49%), Postives = 452/521 (86.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGASEE+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 19  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 78

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAG-------- 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSD NANNQ ELPEEN+NAG        
Sbjct: 79  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLLRNLYLE 138

Query: 121 -----------------------------------VVSSLILLRNNGILRETEEEVNGHN 180
                                              +V SLI+LR NGILRE EEEVNGHN
Sbjct: 139 FIFTCHENLNLYGIVELKCEKIVPAVLEATFLARYIVRSLIILRKNGILRECEEEVNGHN 198

Query: 181 LEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLHAFK 240
           LEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEIVK+KQKQ+ADRAVV+LHAFK
Sbjct: 199 LEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADRAVVQLHAFK 258

Query: 241 WKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKMVKT 300
           WKK+IASSSSESKERLKSLRSTNSSAKVKSLS  KHE+L HPTTVLFVEVYHKSRKMVK+
Sbjct: 259 WKKDIASSSSESKERLKSLRSTNSSAKVKSLSGEKHESLHHPTTVLFVEVYHKSRKMVKS 318

Query: 301 QEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYSKPI 360
           QEFLAL RQTLAELKDKIYCSTD LM+KA  QDSSGYFL+EDVFCNDLRNPSAIDYSKPI
Sbjct: 319 QEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDLRNPSAIDYSKPI 378

Query: 361 FDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNTVRFCDLKFRLGA 420
            DWLRNSEDEARKKWECIITGESQQKNSVVGEVS  HVPHFRSVSM+ VRFCDLKFRLGA
Sbjct: 379 LDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGA 438

Query: 421 GYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKKVTL 479
           GYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRAQKCDVCNIYRAKKVTL
Sbjct: 439 GYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKVTL 498

[Close]

BLAST of CaUC01G009580 vs. NCBI nr
Match: XP_038894485.1 (snRNA-activating protein complex subunit isoform X4 [Benincasa hispida])

HSP 1 Score: 835.9 bits (2158), Expect = 1.8e-238
Identity = 429/478 (89.75%), Postives = 442/478 (92.47%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARDGA ASEEM +NGDGLSIPLGGPIYAPNLVGPLTRV HFESSLIQELQSLEA LHL
Sbjct: 1   MEARDGARASEEMALNGDGLSIPLGGPIYAPNLVGPLTRVSHFESSLIQELQSLEAALHL 60

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCD+DISIDGLKVFTEEQLLNMALEESLQSDENANNQ ELPEENLNAGV+      
Sbjct: 61  DSSQLCDDDISIDGLKVFTEEQLLNMALEESLQSDENANNQLELPEENLNAGVI------ 120

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
                 RE EEEVNGHNLEAAPASNA+RS NKMT RKRK+EE SNIEE S AKVAEI K+
Sbjct: 121 ------RENEEEVNGHNLEAAPASNASRSMNKMTRRKRKQEEHSNIEEKSMAKVAEIAKL 180

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPT 240
           KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTN S KVKSLSSG+H TL+HPT
Sbjct: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNFSTKVKSLSSGEHGTLRHPT 240

Query: 241 TVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDV 300
           TVLFVEVYHKSRKMVKTQE L L +Q LAELKDKIYCSTD LMEKA QQDSSGYFLIEDV
Sbjct: 241 TVLFVEVYHKSRKMVKTQELLVLGQQKLAELKDKIYCSTDTLMEKAGQQDSSGYFLIEDV 300

Query: 301 FCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRS 360
           FCNDLRNPSAIDYSKPIFDWL+NSEDEARKKW CIITGESQQK+SVV EVSVSHVPHFRS
Sbjct: 301 FCNDLRNPSAIDYSKPIFDWLKNSEDEARKKWGCIITGESQQKSSVVDEVSVSHVPHFRS 360

Query: 361 VSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTR 420
           V+MN VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTR
Sbjct: 361 VNMNKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTR 420

Query: 421 AQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 479
           A+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Sbjct: 421 ARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 466

[Close]

BLAST of CaUC01G009580 vs. NCBI nr
Match: TYK29378.1 (snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 835.5 bits (2157), Expect = 2.3e-238
Identity = 432/524 (82.44%), Postives = 452/524 (86.26%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAG-------- 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG        
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLSKVRNL 120

Query: 121 --------------------------------------VVSSLILLRNNGILRETEEEVN 180
                                                 +V SLI+LR NGILRE EEEVN
Sbjct: 121 YLEFIFACHENLNLYGIVESKCEKIVPAVLEATFLARCIVRSLIILRKNGILRECEEEVN 180

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+KQKQ+ADRAVV+LH
Sbjct: 181 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLH 240

Query: 241 AFKWKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKM 300
           AFKWKK+IASSSSESKERLKSLRSTN+SAKVKSL+ GKHE+L HP TVLFVEVYHKSRKM
Sbjct: 241 AFKWKKDIASSSSESKERLKSLRSTNTSAKVKSLNDGKHESLHHPMTVLFVEVYHKSRKM 300

Query: 301 VKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYS 360
           VK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+EDVFCNDLRNPSAIDYS
Sbjct: 301 VKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDYS 360

Query: 361 KPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNTVRFCDLKFR 420
           KPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPHFRSVSM+ VRFCDLKFR
Sbjct: 361 KPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 420

Query: 421 LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKK 479
           LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRAQKCDVCNIYRAKK
Sbjct: 421 LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKK 480

[Close]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot
Match: Q8L627 (snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.8e-82
Identity = 180/363 (49.59%), Postives = 227/363 (62.53%), Query Frame = 0


Query: 128 ETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEET-------SNIEENSTAKVAEIVKI 187
           E    V+ H    A  +   R+      +KR  + T          EE    KV ++ K+
Sbjct: 18  EPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLAKL 77

Query: 188 KQKQDADRAVVKLHAFKWKKEIAS---SSSESKERLKSLR-STNSSAKVKSLSSGKHETL 247
           KQKQ+ D+A V LH F    E      +  E  E+++SLR   N+  K+K          
Sbjct: 78  KQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDP 137

Query: 248 QHPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFL 307
             P  +L VE+Y+ SRK VKTQEFL L RQ L ELKD I+C+TD +M+KA + D SGYFL
Sbjct: 138 LFPEVILCVEIYN-SRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFL 197

Query: 308 IEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNS-VVGEVSVSHV 367
           IEDVF NDLRNPSA DYS PI DWL NS+DEA KKWEC++TGE Q+K   V+GE     +
Sbjct: 198 IEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDL 257

Query: 368 PHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF 427
           P +R+  M +  FCD++FR+GA Y+YCHQGDCKHTIVIRDMR+ HPEDV +R AYPI+ F
Sbjct: 258 PRYRTADMQSTHFCDIRFRVGASYVYCHQGDCKHTIVIRDMRMSHPEDVQNRAAYPIM-F 317

Query: 428 QLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY 479
             + R QKC VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY
Sbjct: 318 WPKRRIQKCGVCKIKRASKVAVDDKWASENSSYFCDVCFELLH-SEEGP-LNCDFPVFDY 375

[Close]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot
Match: Q5BK68 (snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snapc3 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.2e-34
Identity = 85/248 (34.27%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 242 VLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLM--------EKAAQQDS-- 301
           +L+  +++K R+    Q  L L  Q L EL+D I C +D+ +        ++A +  S  
Sbjct: 182 ILYPVIFNKHREHKPYQTVLVLGSQKLTELRDSICCVSDLQIGGEFSNAPDQAPEHISKD 241

Query: 302 ---SGYFLIEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVG 361
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 242 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 301

Query: 362 EVSVSHVPHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRV 421
                    F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR 
Sbjct: 302 ---------FQTARMEDFTFNDLNIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 361

Query: 422 AYPIVTFQLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 477
            YP++T +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 362 LYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAPEDPCFFCDVCFRMLHYDSEGNKL-G 401

[Close]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot
Match: Q5E9M5 (snRNA-activating protein complex subunit 3 OS=Bos taurus OX=9913 GN=SNAPC3 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-34
Identity = 84/248 (33.87%), Postives = 125/248 (50.40%), Query Frame = 0


Query: 242 VLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLM--------EKAAQQDS-- 301
           +L+  ++HK ++    Q  L L  Q L EL+D I C +D+ +        ++A +  S  
Sbjct: 187 ILYPVIFHKHKEHKPYQTILVLGSQKLTELRDAICCVSDLQIGGEFSNTPDQAPEHISKD 246

Query: 302 ---SGYFLIEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVG 361
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 247 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 306

Query: 362 EVSVSHVPHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRV 421
                    F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR 
Sbjct: 307 ---------FQTAKMEDFTFNDLYIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 366

Query: 422 AYPIVTFQLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 477
            YP++  +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 367 LYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKL-G 406

[Close]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot
Match: Q4R6Y6 (snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNAPC3 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-34
Identity = 85/248 (34.27%), Postives = 125/248 (50.40%), Query Frame = 0


Query: 242 VLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLM--------EKAAQQDS-- 301
           +L+  ++HK ++    Q  L L  Q L EL+D I C +D+ +        ++A +  S  
Sbjct: 187 ILYPVIFHKHKEHKPYQTMLVLGSQKLTELRDSIRCVSDLQIGGEFSNTPDQAPEHISKD 246

Query: 302 ---SGYFLIEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVG 361
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 247 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 306

Query: 362 EVSVSHVPHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRV 421
                    F++  M    F DL  +LG  YLYCHQGDC+H IVI D+RL+H +D  DR 
Sbjct: 307 ---------FQTARMEDFTFNDLCIKLGFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRT 366

Query: 422 AYPIVTFQLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 477
            YP++  +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 367 LYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKL-G 406

[Close]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot
Match: Q9D2C9 (snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 5.0e-34
Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 242 VLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLM--------EKAAQQDS-- 301
           +L+  +++K ++    Q  L L  Q L EL+D I C +D+ +        ++A +  S  
Sbjct: 182 ILYPVIFNKHKEHKPYQTMLVLGSQKLTELRDSICCVSDLQIGGEFSNAPDQAPEHISKD 241

Query: 302 ---SGYFLIEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVG 361
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 242 LYKSAFFYFEGTFYNDRRYPECRDLSRTIIEW-SESHDRGYGK----------------- 301

Query: 362 EVSVSHVPHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRV 421
                    F++  M    F DL  +LG  YLYCHQGDC+H +VI D+RL+H +D  DR 
Sbjct: 302 ---------FQTARMEDFTFNDLHIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 361

Query: 422 AYPIVTFQLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 477
            YP++T +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 362 LYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAPEDPCFFCDVCFRMLHYDSEGNKL-G 401

[Close]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL
Match: A0A1S3CAL2 (snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498307 PE=3 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 9.8e-243
Identity = 431/481 (89.60%), Postives = 451/481 (93.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG++ SLILL
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRSLILL 120

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
           R NGILRE EEEVNGHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+
Sbjct: 121 RKNGILRECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKL 180

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAK---VKSLSSGKHETLQ 240
           KQKQ+ADRAVV+LHAFKWKK+IASSSSESKERLKSLRSTN+SAK   VKSL+ GKHE+L 
Sbjct: 181 KQKQEADRAVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLH 240

Query: 241 HPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLI 300
           HP TVLFVEVYHKSRKMVK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+
Sbjct: 241 HPMTVLFVEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLV 300

Query: 301 EDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPH 360
           EDVFCNDLRNPSAIDYSKPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPH
Sbjct: 301 EDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPH 360

Query: 361 FRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQL 420
           FRSVSM+ VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQL
Sbjct: 361 FRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQL 420

Query: 421 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 479
           RTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ
Sbjct: 421 RTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 480

[Close]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL
Match: A0A1S3C9H5 (snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498307 PE=3 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 9.8e-243
Identity = 431/481 (89.60%), Postives = 451/481 (93.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 26  MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG++ SLILL
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRSLILL 145

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
           R NGILRE EEEVNGHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+
Sbjct: 146 RKNGILRECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKL 205

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAK---VKSLSSGKHETLQ 240
           KQKQ+ADRAVV+LHAFKWKK+IASSSSESKERLKSLRSTN+SAK   VKSL+ GKHE+L 
Sbjct: 206 KQKQEADRAVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLH 265

Query: 241 HPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLI 300
           HP TVLFVEVYHKSRKMVK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+
Sbjct: 266 HPMTVLFVEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLV 325

Query: 301 EDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPH 360
           EDVFCNDLRNPSAIDYSKPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPH
Sbjct: 326 EDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPH 385

Query: 361 FRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQL 420
           FRSVSM+ VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQL
Sbjct: 386 FRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQL 445

Query: 421 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 479
           RTRAQKCDVCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ
Sbjct: 446 RTRAQKCDVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 505

[Close]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL
Match: A0A5D3D338 (snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G002000 PE=3 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 2.3e-239
Identity = 435/521 (83.49%), Postives = 452/521 (86.76%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGASEE+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 19  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 78

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAG-------- 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSD NANNQ ELPEEN+NAG        
Sbjct: 79  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLLRNLYLE 138

Query: 121 -----------------------------------VVSSLILLRNNGILRETEEEVNGHN 180
                                              +V SLI+LR NGILRE EEEVNGHN
Sbjct: 139 FIFTCHENLNLYGIVELKCEKIVPAVLEATFLARYIVRSLIILRKNGILRECEEEVNGHN 198

Query: 181 LEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLHAFK 240
           LEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEIVK+KQKQ+ADRAVV+LHAFK
Sbjct: 199 LEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADRAVVQLHAFK 258

Query: 241 WKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKMVKT 300
           WKK+IASSSSESKERLKSLRSTNSSAKVKSLS  KHE+L HPTTVLFVEVYHKSRKMVK+
Sbjct: 259 WKKDIASSSSESKERLKSLRSTNSSAKVKSLSGEKHESLHHPTTVLFVEVYHKSRKMVKS 318

Query: 301 QEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYSKPI 360
           QEFLAL RQTLAELKDKIYCSTD LM+KA  QDSSGYFL+EDVFCNDLRNPSAIDYSKPI
Sbjct: 319 QEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDLRNPSAIDYSKPI 378

Query: 361 FDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNTVRFCDLKFRLGA 420
            DWLRNSEDEARKKWECIITGESQQKNSVVGEVS  HVPHFRSVSM+ VRFCDLKFRLGA
Sbjct: 379 LDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFRLGA 438

Query: 421 GYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKKVTL 479
           GYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRAQKCDVCNIYRAKKVTL
Sbjct: 439 GYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKKVTL 498

[Close]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL
Match: A0A5D3E0W6 (snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G001090 PE=3 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 1.1e-238
Identity = 432/524 (82.44%), Postives = 452/524 (86.26%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGAS+E+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAG-------- 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSDENANNQ ELPEEN+NAG        
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLSKVRNL 120

Query: 121 --------------------------------------VVSSLILLRNNGILRETEEEVN 180
                                                 +V SLI+LR NGILRE EEEVN
Sbjct: 121 YLEFIFACHENLNLYGIVESKCEKIVPAVLEATFLARCIVRSLIILRKNGILRECEEEVN 180

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEI K+KQKQ+ADRAVV+LH
Sbjct: 181 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLH 240

Query: 241 AFKWKKEIASSSSESKERLKSLRSTNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKM 300
           AFKWKK+IASSSSESKERLKSLRSTN+SAKVKSL+ GKHE+L HP TVLFVEVYHKSRKM
Sbjct: 241 AFKWKKDIASSSSESKERLKSLRSTNTSAKVKSLNDGKHESLHHPMTVLFVEVYHKSRKM 300

Query: 301 VKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYS 360
           VK+QEFLAL RQTLAELKDKIYCSTD LM+KA QQDSSGYFL+EDVFCNDLRNPSAIDYS
Sbjct: 301 VKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDYS 360

Query: 361 KPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPHFRSVSMNTVRFCDLKFR 420
           KPI DWLRNSEDEARKKWECIITGE QQKNSVVGEVS  HVPHFRSVSM+ VRFCDLKFR
Sbjct: 361 KPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 420

Query: 421 LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKK 479
           LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRAQKCDVCNIYRAKK
Sbjct: 421 LGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCDVCNIYRAKK 480

[Close]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL
Match: A0A1S4DZX0 (snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC103494603 PE=3 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.1e-236
Identity = 426/481 (88.57%), Postives = 442/481 (91.89%), Query Frame = 0


Query: 1   MEARDGAGASEEMTVNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSLEAELHL 60
           MEARD AGASEE+ +NGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE QSLEAELHL
Sbjct: 26  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  DSSQLCDEDISIDGLKVFTEEQLLNMALEESLQSDENANNQPELPEENLNAGVVSSLILL 120
           DSSQLCDEDISID LK+FTEEQLLNMALEESLQSD NANNQ ELPEEN+NA         
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNA--------- 145

Query: 121 RNNGILRETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKI 180
              G+LRE EEEVNGHNLEA PASNANRSTNKMTTRKRKKEE S IEE S AKVAEIVK+
Sbjct: 146 ---GLLRECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKL 205

Query: 181 KQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNSSAK---VKSLSSGKHETLQ 240
           KQKQ+ADRAVV+LHAFKWKK+IASSSSESKERLKSLRSTNSSAK   VKSLS  KHE+L 
Sbjct: 206 KQKQEADRAVVQLHAFKWKKDIASSSSESKERLKSLRSTNSSAKVPHVKSLSGEKHESLH 265

Query: 241 HPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLI 300
           HPTTVLFVEVYHKSRKMVK+QEFLAL RQTLAELKDKIYCSTD LM+KA  QDSSGYFL+
Sbjct: 266 HPTTVLFVEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLV 325

Query: 301 EDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNSVVGEVSVSHVPH 360
           EDVFCNDLRNPSAIDYSKPI DWLRNSEDEARKKWECIITGESQQKNSVVGEVS  HVPH
Sbjct: 326 EDVFCNDLRNPSAIDYSKPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPH 385

Query: 361 FRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQL 420
           FRSVSM+ VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQL
Sbjct: 386 FRSVSMSKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQL 445

Query: 421 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 479
           RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ
Sbjct: 446 RTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQ 494

[Close]

BLAST of CaUC01G009580 vs. TAIR 10
Match: AT1G28560.2 (snRNA activating complex family protein )

HSP 1 Score: 310.5 bits (794), Expect = 2.4e-84
Identity = 189/400 (47.25%), Postives = 245/400 (61.25%), Query Frame = 0


Query: 86  MALEESLQSDENANNQPELPEENLNAGVVSSLILLR--NNGILRETEEEVNGHNLEAAPA 145
           MA++E+   D  +  + E P  N++    SS  + +   N +    + +    N E    
Sbjct: 1   MAMKEAFPEDYLSQEELE-PSLNVSHHRASSQYISKVFENPLAGRAKRKRTVKNTEVKKR 60

Query: 146 SNANRSTNKMTTRKRKKEETSNIEENSTAKVAEIVKIKQKQDADRAVVKLHAFKWKKEIA 205
           +  N    KMT +K         EE    KV ++ K+KQKQ+ D+A V LH F    E  
Sbjct: 61  TLKNTEVMKMTEKK--------TEEAYLVKVEQLAKLKQKQEEDKAAVTLHCFSKTSETG 120

Query: 206 S---SSSESKERLKSLR-STNSSAKVKSLSSGKHETLQHPTTVLFVEVYHKSRKMVKTQE 265
               +  E  E+++SLR   N+  K+K            P  +L VE+Y+ SRK VKTQE
Sbjct: 121 KDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDPLFPEVILCVEIYN-SRK-VKTQE 180

Query: 266 FLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFLIEDVFCNDLRNPSAIDYSKPIFD 325
           FL L RQ L ELKD I+C+TD +M+KA + D SGYFLIEDVF NDLRNPSA DYS PI D
Sbjct: 181 FLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILD 240

Query: 326 WLRNSEDEARKKWECIITGESQQKNS-VVGEVSVSHVPHFRSVSMNTVRFCDLKFRLGAG 385
           WL NS+DEA KKWEC++TGE Q+K   V+GE     +P +R+  M +  FCD++FR+GA 
Sbjct: 241 WLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFRVGAS 300

Query: 386 YLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRAQKCDVCNIYRAKKVTLD 445
           Y+YCHQGDCKHTIVIRDMR+ HPEDV +R AYPI+ F  + R QKC VC I RA KV +D
Sbjct: 301 YVYCHQGDCKHTIVIRDMRMSHPEDVQNRAAYPIM-FWPKRRIQKCGVCKIKRASKVAVD 360

Query: 446 DKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 479
           DKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Sbjct: 361 DKWASENSSYFCDVCFELLH-SEEGP-LNCDFPVFDYVHE 386

[Close]

BLAST of CaUC01G009580 vs. TAIR 10
Match: AT1G28560.1 (snRNA activating complex family protein )

HSP 1 Score: 307.0 bits (785), Expect = 2.7e-83
Identity = 180/363 (49.59%), Postives = 227/363 (62.53%), Query Frame = 0


Query: 128 ETEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEET-------SNIEENSTAKVAEIVKI 187
           E    V+ H    A  +   R+      +KR  + T          EE    KV ++ K+
Sbjct: 18  EPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLAKL 77

Query: 188 KQKQDADRAVVKLHAFKWKKEIAS---SSSESKERLKSLR-STNSSAKVKSLSSGKHETL 247
           KQKQ+ D+A V LH F    E      +  E  E+++SLR   N+  K+K          
Sbjct: 78  KQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDP 137

Query: 248 QHPTTVLFVEVYHKSRKMVKTQEFLALARQTLAELKDKIYCSTDMLMEKAAQQDSSGYFL 307
             P  +L VE+Y+ SRK VKTQEFL L RQ L ELKD I+C+TD +M+KA + D SGYFL
Sbjct: 138 LFPEVILCVEIYN-SRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFL 197

Query: 308 IEDVFCNDLRNPSAIDYSKPIFDWLRNSEDEARKKWECIITGESQQKNS-VVGEVSVSHV 367
           IEDVF NDLRNPSA DYS PI DWL NS+DEA KKWEC++TGE Q+K   V+GE     +
Sbjct: 198 IEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDL 257

Query: 368 PHFRSVSMNTVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF 427
           P +R+  M +  FCD++FR+GA Y+YCHQGDCKHTIVIRDMR+ HPEDV +R AYPI+ F
Sbjct: 258 PRYRTADMQSTHFCDIRFRVGASYVYCHQGDCKHTIVIRDMRMSHPEDVQNRAAYPIM-F 317

Query: 428 QLRTRAQKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY 479
             + R QKC VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY
Sbjct: 318 WPKRRIQKCGVCKIKRASKVAVDDKWASENSSYFCDVCFELLH-SEEGP-LNCDFPVFDY 375

The following BLAST results are available for this feature:

BLAST of CaUC01G009580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459095.1	2.0e-242	89.60	PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis mel...	[more]
XP_008459093.1	2.0e-242	89.60	PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis mel...	[more]
TYK17049.1	4.7e-239	83.49	snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. maku...	[more]
XP_038894485.1	1.8e-238	89.75	snRNA-activating protein complex subunit isoform X4 [Benincasa hispida]	[more]
TYK29378.1	2.3e-238	82.44	snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. maku...	[more]

BLAST of CaUC01G009580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L627	3.8e-82	49.59	snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2...	[more]
Q5BK68	2.2e-34	34.27	snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snap...	[more]
Q5E9M5	3.8e-34	33.87	snRNA-activating protein complex subunit 3 OS=Bos taurus OX=9913 GN=SNAPC3 PE=2 ...	[more]
Q4R6Y6	3.8e-34	34.27	snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNA...	[more]
Q9D2C9	5.0e-34	33.87	snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE...	[more]

BLAST of CaUC01G009580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAL2	9.8e-243	89.60	snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3C9H5	9.8e-243	89.60	snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A5D3D338	2.3e-239	83.49	snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo var. ma...	[more]
A0A5D3E0W6	1.1e-238	82.44	snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo var. ma...	[more]
A0A1S4DZX0	3.1e-236	88.57	snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CaUC01G009580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28560.2	2.4e-84	47.25	snRNA activating complex family protein	[more]
AT1G28560.1	2.7e-83	49.59	snRNA activating complex family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022042	snRNA-activating protein complex, subunit 3	PFAM	PF12251	zf-SNAP50_C	coord: 258..475 e-value: 1.8E-70 score: 236.7
IPR022042	snRNA-activating protein complex, subunit 3	PANTHER	PTHR13421	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 10..475
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G009580.1	CaUC01G009580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042795	snRNA transcription by RNA polymerase II
biological_process	GO:0042796	snRNA transcription by RNA polymerase III
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019185	snRNA-activating protein complex
molecular_function	GO:0003681	bent DNA binding
molecular_function	GO:0001046	core promoter sequence-specific DNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0001006	RNA polymerase III type 3 promoter sequence-specific DNA binding