CaUC01G009470 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G009470
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription factor RAX2-like
Location	Ciama_Chr01: 11682024 .. 11683565 (+)
RNA-Seq Expression	CaUC01G009470
Synteny	CaUC01G009470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGACCTGGGTGGTCCGAGTACTGGACAGATCATTGCAATGAGGACTATACCATCGCCATTGAGCAATGAATCATACGATTCTAGGAATTATGGATGGATGCTTCACCTGCCAATCCTGGGTACTTAAATATTTACCACTTGAAGGCGATTGTTTTCTTCAGTCCATCATAGAAAGGTCATATGCTTGGCCAAGGTTTAACAAAATTGAGCACGGACATAAGCTTGCTTCTGCCATTTTTCATGCAAGGAAGCCAGGAGGACTGTTCTATTGGTCGTAATTACTATTATGTTTCTGCTGTACTCTAGGATCGTTATATTATGCTTTTAACTTGCAGTTATAAATGTAATTTGGTTTACAGAATTCGTTTTTCTTAGTTCAACATGTAATTTTGGTCTAGGATTCAATTGTATCTCTCTGTCAGTTGAGCTTTTAGCCAGTATATTGCGTAGAGTCAAAGGAAAAAAAAAAAGATTAAAATTAAACCACATTTGGTGTAGATGATTATTATCAAAGATGGTTGTCAGAGTATGTGTTGGAGTGAGATAATAGTAGTGGTTGATGGTGGTCGTTATTGGAATTGGGCATTAGAGCATGTCATGACGATGATTGTAACTAGAATTAGTCATCGATTAGAAACATTATATTGAAGGTAGGGAGAAAGAAAGAGCGAAAGATGAAGTTATTCAATAAATAGACAAACTTCAATAATGAACTCGATTAAATTATTAAAATAACTTAACATCGACTTGTATAGTTGGTAGGCTAAAGACGGGAGTTGGTTAACCAAGTGAATTCTCCAAACACCCATTAAAAATAGTAAAATAACATTTTTTTTAATTTAAAAAAGAAAGCTTTTTACAAAACTATATTTATATACAACTCATACAGTAGTCACAAGTCCACAACAAACAACAACAAAACACACTCCCAAGTTTTTAATCTTGTCCCCTTTAACAAAGCTCCATCCATGGCGGCTCTCTCTCTCTAATCTCTCTCTCTCCTTCTTTCTTCAGTCTCCATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCTCCTCAAGAAGACGCTACTCTCACTGCCTTTATTAATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCGCAAAGCCGGTTCGTTTCGTAACGGTTTCGTTTTTATAATTTTCATTATTTTAAAATACAATTATCAAATGCAACCTTAAGTTTTTGGATTAAGTCGTGATTTACTATGTTTTTTTTTTTTAAATTAGGGCTTAATCGGTGTGGGAAGAGCTGCCGGCTGAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACAATTGGAAGTAGGCAAGTTCTTTAATTCTCCTTTAAAATATAAGACTTGATAAATTTTATTATGATTATGTTTATTTATGGGTTTAATATTGCTAATTTAACTAAATATATTAAATCATGGCATTCTTTCTTCAAAAAAAGTAAT

mRNA sequence

ATGCGTGACCTGGGTGGTCCGAGTACTGGACAGATCATTGCAATGAGGACTATACCATCGCCATTGAGCAATGAATCATACGATTCTAGGAATTATGGATGGATGCTTCACCTGCCAATCCTGGTCTCCATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCTCCTCAAGAAGACGCTACTCTCACTGCCTTTATTAATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCGCAAAGCCGGGCTTAATCGGTGTGGGAAGAGCTGCCGGCTGAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACAATTGGAAGTAGGCAAGTTCTTTAATTCTCCTTTAAAATATAAGACTTGATAAATTTTATTATGATTATGTTTATTTATGGGTTTAATATTGCTAATTTAACTAAATATATTAAATCATGGCATTCTTTCTTCAAAAAAAGTAAT

Coding sequence (CDS)

ATGCGTGACCTGGGTGGTCCGAGTACTGGACAGATCATTGCAATGAGGACTATACCATCGCCATTGAGCAATGAATCATACGATTCTAGGAATTATGGATGGATGCTTCACCTGCCAATCCTGGTCTCCATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCTCCTCAAGAAGACGCTACTCTCACTGCCTTTATTAATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCGCAAAGCCGGGCTTAATCGGTGTGGGAAGAGCTGCCGGCTGAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACAATTGGAAGTAGGCAAGTTCTTTAA

Protein sequence

MRDLGGPSTGQIIAMRTIPSPLSNESYDSRNYGWMLHLPILVSMGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRQVL

Homology

[Close]

BLAST of CaUC01G009470 vs. NCBI nr
Match: XP_004135811.1 (LOW QUALITY PROTEIN: transcription factor RAX2 [Cucumis sativus] >XP_031745742.1 transcription factor RAX2-like [Cucumis sativus] >KAE8637464.1 hypothetical protein CSA_004497 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 9.0e-47
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFTQEEDNVICSLYSTIGSR
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. NCBI nr
Match: XP_008450812.1 (PREDICTED: transcription factor RAX2-like [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 9.0e-47
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFTQEEDNVICSLYSTIGSR
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. NCBI nr
Match: TYK10125.1 (transcription factor RAX2-like [Cucumis melo var. makuwa])

HSP 1 Score: 195.3 bits (495), Expect = 3.4e-46
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGS 132
           YLRPDIKHGGFTQEEDNVICSLYSTIGS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGS 88

[Close]

BLAST of CaUC01G009470 vs. NCBI nr
Match: XP_023530624.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.1 bits (479), Expect = 2.5e-44
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 43  SMGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWL 102
           SMGRAPCCDKA+VKRGPWSPQEDATL AFI+KHGT GNWIALPRKAGLNRCGKSCRLRWL
Sbjct: 48  SMGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWL 107

Query: 103 NYLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           NYLRPDIKHGGFT EEDN+IC+LYST+GSR
Sbjct: 108 NYLRPDIKHGGFTLEEDNLICTLYSTLGSR 137

[Close]

BLAST of CaUC01G009470 vs. NCBI nr
Match: XP_022933833.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 7.2e-44
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VKRGPWSPQEDATL AFI+KHGT GNWIALPRKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFT EEDN+IC+LYST+GSR
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.9e-41
Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHGGF++EE+N+ICSLY TIGSR
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.0e-40
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALP KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+I+HG FT+EEDN+I SL+++IGSR
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-39
Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VK+GPWSP+ED  L  +I+K+GTGGNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHGGF++EED +I SLY +IGSR
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-39
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP++ G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP++KHGGFT EED +ICSLY TIGSR
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.8e-37
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDK  VKRGPWSP+ED+ L  +I K+G GGNWI+ P KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHG F++EED +I SL++ IGSR
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL
Match: A0A0A0LZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.4e-47
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFTQEEDNVICSLYSTIGSR
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL
Match: A0A1S3BPH8 (transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.4e-47
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFTQEEDNVICSLYSTIGSR
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL
Match: A0A5D3CF12 (Transcription factor RAX2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002680 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKASVKRGPWSPQEDATLTAFI+KHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGS 132
           YLRPDIKHGGFTQEEDNVICSLYSTIGS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGS 88

[Close]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL
Match: A0A6J1KT76 (transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.5e-44
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VKRGPWSPQEDATL AFI+KHGT GNWIALPRKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFT EEDN+IC+LYST+GSR
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSR 89

[Close]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL
Match: A0A6J1F5Y4 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.5e-44
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VKRGPWSPQEDATL AFI+KHGT GNWIALPRKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRPDIKHGGFT EEDN+IC+LYST+GSR
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSR 89

[Close]

BLAST of CaUC01G009470 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 168.3 bits (425), Expect = 4.2e-42
Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHGGF++EE+N+ICSLY TIGSR
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 167.5 bits (423), Expect = 7.2e-42
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VK+GPWSP+EDA L  +I   GTGGNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHGGF++EEDN+IC+LY TIGSR
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]

BLAST of CaUC01G009470 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-41
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALP KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+I+HG FT+EEDN+I SL+++IGSR
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of CaUC01G009470 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-40
Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDKA+VK+GPWSP+ED  L  +I+K+GTGGNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP+IKHGGF++EED +I SLY +IGSR
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of CaUC01G009470 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 162.2 bits (409), Expect = 3.0e-40
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 44  MGRAPCCDKASVKRGPWSPQEDATLTAFINKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 103
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP++ G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 104 YLRPDIKHGGFTQEEDNVICSLYSTIGSR 133
           YLRP++KHGGFT EED +ICSLY TIGSR
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

The following BLAST results are available for this feature:

BLAST of CaUC01G009470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135811.1	9.0e-47	97.75	LOW QUALITY PROTEIN: transcription factor RAX2 [Cucumis sativus] >XP_031745742.1...	[more]
XP_008450812.1	9.0e-47	97.75	PREDICTED: transcription factor RAX2-like [Cucumis melo]	[more]
TYK10125.1	3.4e-46	97.73	transcription factor RAX2-like [Cucumis melo var. makuwa]	[more]
XP_023530624.1	2.5e-44	91.11	transcription factor MYB36-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933833.1	7.2e-44	91.01	transcription factor MYB36-like [Cucurbita moschata]	[more]

BLAST of CaUC01G009470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y9	5.9e-41	78.65	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9SJL7	5.0e-40	78.65	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9FKL2	2.5e-39	76.40	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
F4JSU0	4.2e-39	74.16	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9FG68	8.8e-37	71.91	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of CaUC01G009470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZB2	4.4e-47	97.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1	[more]
A0A1S3BPH8	4.4e-47	97.75	transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1	[more]
A0A5D3CF12	1.7e-46	97.73	Transcription factor RAX2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1KT76	3.5e-44	91.01	transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 ...	[more]
A0A6J1F5Y4	3.5e-44	91.01	transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE...	[more]

BLAST of CaUC01G009470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49690.1	4.2e-42	78.65	myb domain protein 84	[more]
AT5G65790.1	7.2e-42	78.65	myb domain protein 68	[more]
AT2G36890.1	3.5e-41	78.65	Duplicated homeodomain-like superfamily protein	[more]
AT5G57620.1	1.8e-40	76.40	myb domain protein 36	[more]
AT4G37780.1	3.0e-40	74.16	myb domain protein 87	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 56..107 e-value: 2.5E-11 score: 53.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 52..105 score: 10.835777
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 59..105 e-value: 3.06872E-9 score: 47.5702
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 57..105 e-value: 2.2E-13 score: 50.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 52..109 score: 18.636452
None	No IPR available	GENE3D	1.10.10.60		coord: 50..111 e-value: 1.1E-18 score: 68.8
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 44..132
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 44..132
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 58..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G009470.1	CaUC01G009470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane