CaUC01G009010 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATGCAGCTTGGAAGGAAGACCCACCTTCAACAGGTTGGAGTTCTATTGTACGAGATTGGAATGGAAATTTGTGTGGGGGTTTCAGCGAGTTCCTTGAATCTGGTTTTTGATCCCCCATTGGCAGAAATTCTAGCCATTCGGGATGGACTTCGTTTTGCTTTATCCTGTGCTTACCAAAAGATTCAGGTGGAATCAGATTGTGCACAAGCCATGAATGCAATCACAAGTGAAGATCCCCAACTGAGTTGTGCTGATTGTTGGCTGGAAGAAATTAGGGATTTATCTTGTAATTTCACTTCAGTCCAGTTTTTGTACGTAATCGAGAATGTAATGGGGTGGCTGATAGTGTAG ATGTTGATGCAGCTTGGAAGGAAGACCCACCTTCAACAGGTTGGAGTTCTATTGTACGAGATTGGAATGGAAATTTGTGTGGGGGTTTCAGCGAGTTCCTTGAATCTGGTTTTTGATCCCCCATTGGCAGAAATTCTAGCCATTCGGGATGGACTTCGTTTTGCTTTATCCTGTGCTTACCAAAAGATTCAGGTGGAATCAGATTGTGCACAAGCCATGAATGCAATCACAAGTGAAGATCCCCAACTGAGTTGTGCTGATTGTTGGCTGGAAGAAATTAGGGATTTATCTTGTAATTTCACTTCAGTCCAGTTTTTGTACGTAATCGAGAATGTAATGGGGTGGCTGATAGTGTAG ATGTTGATGCAGCTTGGAAGGAAGACCCACCTTCAACAGGTTGGAGTTCTATTGTACGAGATTGGAATGGAAATTTGTGTGGGGGTTTCAGCGAGTTCCTTGAATCTGGTTTTTGATCCCCCATTGGCAGAAATTCTAGCCATTCGGGATGGACTTCGTTTTGCTTTATCCTGTGCTTACCAAAAGATTCAGGTGGAATCAGATTGTGCACAAGCCATGAATGCAATCACAAGTGAAGATCCCCAACTGAGTTGTGCTGATTGTTGGCTGGAAGAAATTAGGGATTTATCTTGTAATTTCACTTCAGTCCAGTTTTTGTACGTAATCGAGAATGTAATGGGGTGGCTGATAGTGTAG MLMQLGRKTHLQQVGVLLYEIGMEICVGVSASSLNLVFDPPLAEILAIRDGLRFALSCAYQKIQVESDCAQAMNAITSEDPQLSCADCWLEEIRDLSCNFTSVQFLYVIENVMGWLIV Homology
BLAST of CaUC01G009010 vs. NCBI nr
Match: XP_031103207.1 (uncharacterized protein LOC116006850 [Ipomoea triloba]) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-05 Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of CaUC01G009010 vs. NCBI nr
Match: XP_031095241.1 (uncharacterized protein LOC115999536 [Ipomoea triloba]) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04 Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of CaUC01G009010 vs. NCBI nr
Match: KAF4366503.1 (hypothetical protein F8388_003741 [Cannabis sativa]) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CaUC01G009010 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida]) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04 Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of CaUC01G009010 vs. NCBI nr
Match: KAF4400944.1 (hypothetical protein G4B88_013785 [Cannabis sativa]) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CaUC01G009010 vs. ExPASy TrEMBL
Match: A0A7J6F713 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003741 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CaUC01G009010 vs. ExPASy TrEMBL
Match: A0A7J6I094 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_013785 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CaUC01G009010 vs. ExPASy TrEMBL
Match: A0A6J1CNR4 (uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012950 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CaUC01G009010 vs. ExPASy TrEMBL
Match: A0A803NTU1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.8e-04 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CaUC01G009010 vs. ExPASy TrEMBL
Match: A0A6J1DZK3 (uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024968 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.0e-04 Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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