CaUC01G008740 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGTTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTACTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCCCCAACTATCTATACTTTAAAATAAAATAGCTAATTAATTTTATTCATTTCCACTTTTATACTCTTACTTTTACTTCATTTACATAGCTCAACTTTAAGTAGTACAATAATCGAGTTTCATCTCTTCACTTCACAATTGTCAATAAAAAATAATTTTTTAAACATGAGTTCTTTTTTGTTAGAATACTTTTTAAGTGTACTTCAAAAAATATATATATATATATAATAAACTATGACTAGACAATTGGATCTTGATGGTGATAGATAGACGGAGTCTAAGAGATTTTACCCCATGGTTATAAATAGATTTACTATAAAATCACCACCTAAAGTAAACATTTTAACTCAAAATTATTTTTATCAATGTGAGACTATTATATATATAATAAATTATTATTCTACTGAGTTGGTGTACATTTAATTATAAAACGTCTAACTAGTCAAAATATGTTAAATCACTACTAAATTATTTTACTCAATATTAGATTGTAGAGATTAATTTTATTAGTATTTTTTAAGCACTAGGAAGTAGGAACAAGTTAGAAGCAATTCTTCCTATCATATAATTTTTTTTTTTTTTTTTTTTTTGGACAAACTCCTACATCAATTTGAACATAGAAAAATAATAATAACGAAAAATAAAACGAAAACAAAGTCTCTCTTTTAATTTTAGTTTAGAGGTGTTTTTAAATATAGAAAAATGAGTCCAACACTTCATAAATATAGAAAAATTTTGATAGAAATCACTCGGGTGAGTGGAATTTTTATGTATTTATAAATAGTTTTATATATTTTTTTATTTATAATAATTTTCTTTTAATTTATCTATCCATTACAATTGCAAGAAAGTGTGGTGGCTTAGGGTAAGTTGGTAATTTAGGTACAATAGGGAGGTGAATTAATTAAGCCTCGAGATTTTGTATGGCAACCCAAATAAAGTAATGTTTGAAGAAGACGAGACCCAACAAACAAAAAGAAGGATACCATATATATAGATTTATTTTTATATATATATTATAAATTAATTTTTAATTACAATAATCCAAACACCCTTTTTCTCTATTTCTTCCATTCTTATCACTTTTTCGATGCTATTTTTATTTACATTATGTCCCAGACAATCTAGTTTCGAAGAAAGTGAATTTGTTTCATTAACTAATTAATAATCTAATTATCTCTTATTTTTTTCTCTTTTTGTCCATCAAATACTATAAATAATTCTCCTTTTTTTGGTTATGTTTTCGATCTTAATGTTGGATTTTGAGGTGGTCGTGTTGGGGGCAGTGTCATTGCTGTTCCTAAACACCATTTTTTTCTTTCTTTTTTTTCGGTTATAAATTAATTTGATTTTGATATAGTTGTGAAAGTTTTATAACTAATGGGCTTTTTAGAAAGAAAAAAAAAAACTGTGATATTATTTATTCAAACTTGAACTTCATTATTTGATTCAAGTTTGTAATTTGTTTTGGAAATTTTCTAATTTACTTCTAAGTCAATCTTGAAGTAATTTGAGAAATTTAAAGAAAAAGAATATAAAATGAATATGTTTTTGTTTTAAACAGCTAGCTAAGATGTAAATTAAATTTAAATAATTTCATTTAAAAAAATTATGTTTGTAATTTGAATGAACAGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGGTTTGTTTTTTTTTTTCTTTTCCTTCTGTTGAACAATGATTAATTTATATATATATATATATATATATATATATATATCCATAGTTAAATAACACATAAATTATTCTTATAATTGTTAATTAGTTTGATTAAAAGGGTAAGTTATTGATTAATTAATGATTTTCAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTGATATATAATTAAAGATTTAATTTGCTCTTTGTTTTTAAGTCTCAAATATAATTATTTACTAATTAGTTTGTATGTTAAACTAACTTTTCCTTAATTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTAACATTTTTTTTTTTTGTGTTGAATTTTGCAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGTAGGCTTTCTTCAATATATAACCTCTTAATTAGTTTATATTCTAACTTACACACATTTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAATGTTAATATTGTCTTTCTAGTCTTTTTTTATTTTTTTATTTTTTTTTTATTTTTTGAAAATATAAATCATAACACATTTAACAAAATCGTTATCAAACTAGGCTTACTTTGGGCTTTTGTCAGTAGAATTAAAAAGAAAAATTCATGATCTAACATATACAAATATGTATTTGTTTTGGTATTGTGAGTTATCACAGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTAAGCTTTATATTCTTTATAATAAGTTAACTCATAGAACTTGCCCTAGAATTTTTGGCAAAACATTTGAATAGCAAAAATTCGTCCACGATTAAAAGGTATTCATTGTGATATTGGTTTCAAATCATTCCAATTAAAAACGTAATTTGAAAGCGTGTAAAAGGAGTGTGAGTGTGGTACAAATTCCAGTGAGACTATATATTATAAATGTTCACATAGGCCCTTTTGGTTTCCACTTATCTAATGGATGCATGTTAATGTTCCTTTTTTTTGGGTTGCATTTCCATAGGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGTTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGTTATCACAGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGTTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGTTATCACAGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA MMPILDHHHDHNNQPLLLPADDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTVITGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQEIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGGLEGFGSVENLSLDDFY Homology
BLAST of CaUC01G008740 vs. NCBI nr
Match: XP_038874973.1 (B3 domain-containing transcription factor FUS3-like [Benincasa hispida]) HSP 1 Score: 454.5 bits (1168), Expect = 6.5e-124 Identity = 246/291 (84.54%), Postives = 252/291 (86.60%), Query Frame = 0
BLAST of CaUC01G008740 vs. NCBI nr
Match: XP_011656199.1 (B3 domain-containing transcription factor FUS3 [Cucumis sativus]) HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-117 Identity = 236/291 (81.10%), Postives = 248/291 (85.22%), Query Frame = 0
BLAST of CaUC01G008740 vs. NCBI nr
Match: XP_023551271.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.4 bits (1038), Expect = 7.7e-109 Identity = 216/265 (81.51%), Postives = 231/265 (87.17%), Query Frame = 0
BLAST of CaUC01G008740 vs. NCBI nr
Match: XP_022939212.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 402.5 bits (1033), Expect = 2.9e-108 Identity = 217/279 (77.78%), Postives = 234/279 (83.87%), Query Frame = 0
BLAST of CaUC01G008740 vs. NCBI nr
Match: XP_022962310.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moschata] >XP_023549049.1 B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 402.1 bits (1032), Expect = 3.8e-108 Identity = 219/286 (76.57%), Postives = 237/286 (82.87%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy Swiss-Prot
Match: Q9LW31 (B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 GN=FUS3 PE=1 SV=2) HSP 1 Score: 258.1 bits (658), Expect = 1.2e-67 Identity = 159/302 (52.65%), Postives = 190/302 (62.91%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy Swiss-Prot
Match: Q01593 (B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 GN=ABI3 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.7e-30 Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy Swiss-Prot
Match: A4LBC0 (B3 domain-containing protein LFL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LFL1 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28 Identity = 66/127 (51.97%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy Swiss-Prot
Match: P26307 (Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 60/110 (54.55%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy Swiss-Prot
Match: P37398 (B3 domain-containing protein VP1 OS=Oryza sativa subsp. japonica OX=39947 GN=VP1 PE=1 SV=3) HSP 1 Score: 123.6 bits (309), Expect = 3.4e-27 Identity = 59/110 (53.64%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy TrEMBL
Match: A0A0A0KR53 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G312320 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118 Identity = 237/292 (81.16%), Postives = 249/292 (85.27%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy TrEMBL
Match: A0A6J1FG64 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445198 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108 Identity = 217/279 (77.78%), Postives = 234/279 (83.87%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy TrEMBL
Match: A0A6J1JM90 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487156 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.9e-108 Identity = 220/287 (76.66%), Postives = 239/287 (83.28%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy TrEMBL
Match: A0A6J1HEP2 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462796 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.9e-108 Identity = 219/286 (76.57%), Postives = 237/286 (82.87%), Query Frame = 0
BLAST of CaUC01G008740 vs. ExPASy TrEMBL
Match: A0A6J1K0G6 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489075 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 7.0e-108 Identity = 218/282 (77.30%), Postives = 234/282 (82.98%), Query Frame = 0
BLAST of CaUC01G008740 vs. TAIR 10
Match: AT3G26790.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 258.1 bits (658), Expect = 8.3e-69 Identity = 159/302 (52.65%), Postives = 190/302 (62.91%), Query Frame = 0
BLAST of CaUC01G008740 vs. TAIR 10
Match: AT3G24650.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 132.9 bits (333), Expect = 4.0e-31 Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0
BLAST of CaUC01G008740 vs. TAIR 10
Match: AT1G28300.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 112.5 bits (280), Expect = 5.6e-25 Identity = 67/160 (41.88%), Postives = 93/160 (58.13%), Query Frame = 0
BLAST of CaUC01G008740 vs. TAIR 10
Match: AT4G32010.1 (HSI2-like 1 ) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14 Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 0
BLAST of CaUC01G008740 vs. TAIR 10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2 ) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-14 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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