CaUC01G008680 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G008680
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type E3 ubiquitin transferase
Location	Ciama_Chr01: 9924206 .. 9925135 (+)
RNA-Seq Expression	CaUC01G008680
Synteny	CaUC01G008680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCGCATCCTTTCCCTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCCCGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGAACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGGAGTGACCACGGCGGCGGGAATGACAGCGATTGA

mRNA sequence

ATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCGCATCCTTTCCCTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCCCGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGAACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGGAGTGACCACGGCGGCGGGAATGACAGCGATTGA

Coding sequence (CDS)

ATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCGCATCCTTTCCCTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCCCGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGAACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGGAGTGACCACGGCGGCGGGAATGACAGCGATTGA

Protein sequence

MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDHGGGNDSD

Homology

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BLAST of CaUC01G008680 vs. NCBI nr
Match: XP_038907201.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 575.1 bits (1481), Expect = 3.7e-160
Identity = 277/310 (89.35%), Postives = 287/310 (92.58%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           MS+ VDKPFFCHQCDRAVTV+VSISSDPLCPFC+EGFLEEYD+SN N N N+  DPRSFF
Sbjct: 1   MSAVVDKPFFCHQCDRAVTVSVSISSDPLCPFCHEGFLEEYDHSNPNSNSNVNLDPRSFF 60

Query: 61  PPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPP-QSSSSVHPEPYDPFVFLQNHLRGI 120
            PHPF RF+PLVFSSS VVDLQNP LFSRT TPPP QSSSSVHPE YDPFVFLQNHLRG+
Sbjct: 61  LPHPFRRFSPLVFSSSTVVDLQNPSLFSRTLTPPPTQSSSSVHPE-YDPFVFLQNHLRGL 120

Query: 121 FESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 180
           FESGADVVFEIPRHSSHSGVSMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI
Sbjct: 121 FESGADVVFEIPRHSSHSGVSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 180

Query: 181 EKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVC 240
           EKL TVTVTE LLNSEMNQCAVC+D FEKG KVKQMPC HVFHDYC+LPWLELHNSCPVC
Sbjct: 181 EKLPTVTVTEDLLNSEMNQCAVCIDEFEKGIKVKQMPCKHVFHDYCILPWLELHNSCPVC 240

Query: 241 RFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDG 300
           RFELPTDDADYENRTRGNRVQ   SSGEESGSGNSG+STGRVERRFRVPLWWPFGGRNDG
Sbjct: 241 RFELPTDDADYENRTRGNRVQANESSGEESGSGNSGNSTGRVERRFRVPLWWPFGGRNDG 300

Query: 301 SDHGGGNDSD 310
           SD GGGNDSD
Sbjct: 301 SDSGGGNDSD 309

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BLAST of CaUC01G008680 vs. NCBI nr
Match: XP_004149872.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_031741982.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50936.1 hypothetical protein Csa_023085 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 1.2e-150
Identity = 260/301 (86.38%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+    NL FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNS----NLNFDPTSFF 60

Query: 61  PPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIF 120
            P PF RFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVH EPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 121 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 181 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 240
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 241 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 300
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 301 D 302
           D
Sbjct: 301 D 297

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BLAST of CaUC01G008680 vs. NCBI nr
Match: KAA0055876.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.6e-150
Identity = 261/309 (84.47%), Postives = 276/309 (89.32%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           MSSAVDKPFFCHQCDRA+TV+VSISSDP CP C+EGFL+EY NSN+N N+NL  D RSFF
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNL--DLRSFF 60

Query: 61  PPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIF 120
            P PF RFNPLVFSSS VVDLQNPG+FSRT   PPQSSSSVHPEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIF 120

Query: 121 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180
           ES ADVVFEIPRHS HSGV MPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE
Sbjct: 121 ESDADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180

Query: 181 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 240
           KLST+TVTE LLNSEMNQCA+C+D FEKG +VKQMPC HVFHDYCLLPWLELHNSC VCR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCR 240

Query: 241 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 300
           FELPTDD+DYENRT GNR+QG  SSGEESGS + GSST RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGS 300

Query: 301 DHGGGNDSD 310
           D GGG DS+
Sbjct: 301 DSGGGIDSE 307

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BLAST of CaUC01G008680 vs. NCBI nr
Match: XP_022938450.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 536.2 bits (1380), Expect = 1.9e-148
Identity = 258/307 (84.04%), Postives = 275/307 (89.58%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 62
           +AVDKPFFCHQCDRAVTV VS+SSDPLCPFCNEGFLEEY+NSN+N NVNL  D  +   P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNL--DRGTLLLP 67

Query: 63  HPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIFES 122
            PF  FNPLV SSS VVDLQNPGLFSRT +   QS+SSV PEPYDPFVFLQNHLRGIF+S
Sbjct: 68  DPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDS 127

Query: 123 GADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 182
           GADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL
Sbjct: 128 GADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 187

Query: 183 STVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFE 242
            TVTVTE LLNSEMNQCAVC+DGFEK TKVKQMPC HVFHDYC+LPWLELHNSCPVCRFE
Sbjct: 188 PTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFE 247

Query: 243 LPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDH 302
           LPTDD+DYENRTRG++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGGRNDGSD 
Sbjct: 248 LPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 307

Query: 303 GGGNDSD 310
           G GN S+
Sbjct: 308 GDGNVSE 312

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BLAST of CaUC01G008680 vs. NCBI nr
Match: XP_023551575.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145
Identity = 254/307 (82.74%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 62
           +AVDKPFFCHQCDRAVTV VS SSDPLCPFCNEGFLEEY+NSN+N NVNL  D  +   P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSPSSDPLCPFCNEGFLEEYENSNSNSNVNL--DRGTLLLP 67

Query: 63  HPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIFES 122
            PF  FNPLV SSS VVDLQNPGLFSRT +   QS+SSV PEPYDPFVFLQNHLRGIF+S
Sbjct: 68  DPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDS 127

Query: 123 GADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 182
           GADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL
Sbjct: 128 GADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 187

Query: 183 STVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFE 242
            T+TVTE LLNSEMNQCAVC+DGFEK T+VKQMPC HVFHDYC+LPWLELHNSCPVCRFE
Sbjct: 188 PTMTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFE 247

Query: 243 LPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDH 302
           LPTDD+DYENRTR ++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGGRNDGSD 
Sbjct: 248 LPTDDSDYENRTRASQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 307

Query: 303 GGGNDSD 310
             GN S+
Sbjct: 308 CDGNVSE 312

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BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.0e-89
Identity = 171/308 (55.52%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 5   VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPR---SFFP 64
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY+  + NPN +L F+P    SFFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE--DPNPNQSLNFNPNSSDSFFP 76

Query: 65  -PHPFPRFNPLVFSSSMVV--DLQNPGLFSRTSTPPPQSS-SSVHPEPYDPFVFLQNHLR 124
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 125 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 184
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 185 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 244
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 245 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 304
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 305 DGSDHGGG 306
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]

BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.3e-87
Identity = 170/315 (53.97%), Postives = 198/315 (62.86%), Query Frame = 0


Query: 6   DKPFFCHQCDRAVTVTVS-ISSDPLCPFCNEGFLEEYDNSN-------ANPNVN-LEF-- 65
           +KPFFC+QC+R V VT+S  SSDP CP CNEGFLEEYDN N        NPN N + F  
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 66  ------DPRSFFPPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDP 125
                 DP +   P  FP  +    SSS  +D  NP L        P  S    P  +DP
Sbjct: 80  LFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSG------PTRSGRGDPFAFDP 139

Query: 126 FVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNR 185
           F F+QNHL  +  SGA + F I  + S  G  +P N GDYFIGPGLEQLIQ LA+NDPNR
Sbjct: 140 FTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNR 199

Query: 186 YGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLP 245
           YGTPPASKSAIE L  V +T+  LNSE NQCAVC+D FE+GT+ KQMPC H++H  CLLP
Sbjct: 200 YGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLP 259

Query: 246 WLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVP 304
           WLELHNSCPVCR ELPTDD DYE R RG +    G+ G+ SG  + G +   VER FR+ 
Sbjct: 260 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR-TVERSFRIS 319

[Close]

BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.4e-34
Identity = 103/316 (32.59%), Postives = 152/316 (48.10%), Query Frame = 0


Query: 10  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFPRFN 69
           +CH+C RAV +      +P+C +C  GF+EE D + A+P                F   +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 68

Query: 70  PL-VFSSSMVVDLQNP-GLFSRTSTPPPQSSSSVHP-------EPYDPFVFLQNHLRGIF 129
              VF  + + +  +   +  RT +  P++   + P        PY   +   N +  +F
Sbjct: 69  AFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYR--LTGDNAVEALF 128

Query: 130 ESGADVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 189
             G+             G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI
Sbjct: 129 NGGS------------PGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAI 188

Query: 190 EKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVC 249
           + L T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVC
Sbjct: 189 DALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVC 248

Query: 250 RFELP--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           R ELP  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF    
Sbjct: 249 RQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSG 301

[Close]

BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.9e-33
Identity = 95/296 (32.09%), Postives = 144/296 (48.65%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           M+ A    ++CH+C++A  +  ++  +  CP C  GF+EE  +       N + +P    
Sbjct: 1   MAEAAITRYWCHECEQA--IEEAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEP---- 60

Query: 61  PPHPFPRFNPLVF-SSSMVVDLQNPGL---------FSRTSTPPPQSSSSVHPEPYDPFV 120
               F ++NP+     +M  D ++  L           R ++   +   S+H +  D   
Sbjct: 61  ---GFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQE 120

Query: 121 FLQNHLRGIFESGADV---VFEIPRHSSHSGVSMPQN--FGDYFIGPGLEQLIQLLADND 180
              + L   F     +   V +        G S   +    +Y +G GL  L+Q LA++D
Sbjct: 121 RDSSILINAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESD 180

Query: 181 PNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYC 240
           P+R GTPPA K A+E L TV + EV+       C+VCLD  E G++ KQMPC H FH  C
Sbjct: 181 PSRNGTPPAKKEAVEALPTVKIEEVV------SCSVCLDDLEVGSQAKQMPCEHKFHSSC 240

Query: 241 LLPWLELHNSCPVCRFELPTDDA-DYENRTRGNRVQGIGSSGEESGSGNSGSSTGR 281
           +LPWLELH+SCPVCRFELP+++  D    +   RV+         G GN   S+ R
Sbjct: 241 ILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNR 281

[Close]

BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 97/299 (32.44%), Postives = 146/299 (48.83%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 62
           S++    +CH+C RAV +    + D +C +C  GF+EE D   +  + ++E DP +F   
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP-TFDLM 61

Query: 63  HPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVF-LQNHLRGIFE 122
             F  F      S +     +  +  R  +   +S S++ P      +F  Q   R    
Sbjct: 62  EAFSAF----MRSRLAERSYDREISGRLGSAGSESFSNLAP----LLIFGGQAPFRLAGG 121

Query: 123 SGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEK 182
             + V   +   +   G++   N GDYF GPGLE+LI+ L+    +R G PPA KS+I+ 
Sbjct: 122 DNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDA 181

Query: 183 LSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRF 242
           L T+ +T+  L S  + C VC D FE  ++ KQMPC+H++H  C++PWL  HNSCPVCR 
Sbjct: 182 LPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRK 241

Query: 243 ELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 301
           ELP         +RG+      SS  +S    S +      RR      WPF   +  S
Sbjct: 242 ELP---------SRGS------SSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSSSS 272

[Close]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL
Match: A0A0A0KT93 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.7e-151
Identity = 260/301 (86.38%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+    NL FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNS----NLNFDPTSFF 60

Query: 61  PPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIF 120
            P PF RFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVH EPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 121 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 181 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 240
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 241 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 300
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 301 D 302
           D
Sbjct: 301 D 297

[Close]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL
Match: A0A5A7UNL2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00740 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 261/309 (84.47%), Postives = 276/309 (89.32%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 60
           MSSAVDKPFFCHQCDRA+TV+VSISSDP CP C+EGFL+EY NSN+N N+NL  D RSFF
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNL--DLRSFF 60

Query: 61  PPHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIF 120
            P PF RFNPLVFSSS VVDLQNPG+FSRT   PPQSSSSVHPEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIF 120

Query: 121 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180
           ES ADVVFEIPRHS HSGV MPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE
Sbjct: 121 ESDADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 180

Query: 181 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 240
           KLST+TVTE LLNSEMNQCA+C+D FEKG +VKQMPC HVFHDYCLLPWLELHNSC VCR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCR 240

Query: 241 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 300
           FELPTDD+DYENRT GNR+QG  SSGEESGS + GSST RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGS 300

Query: 301 DHGGGNDSD 310
           D GGG DS+
Sbjct: 301 DSGGGIDSE 307

[Close]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL
Match: A0A6J1FJU6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.1e-149
Identity = 258/307 (84.04%), Postives = 275/307 (89.58%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 62
           +AVDKPFFCHQCDRAVTV VS+SSDPLCPFCNEGFLEEY+NSN+N NVNL  D  +   P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNL--DRGTLLLP 67

Query: 63  HPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIFES 122
            PF  FNPLV SSS VVDLQNPGLFSRT +   QS+SSV PEPYDPFVFLQNHLRGIF+S
Sbjct: 68  DPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDS 127

Query: 123 GADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 182
           GADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL
Sbjct: 128 GADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 187

Query: 183 STVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFE 242
            TVTVTE LLNSEMNQCAVC+DGFEK TKVKQMPC HVFHDYC+LPWLELHNSCPVCRFE
Sbjct: 188 PTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFE 247

Query: 243 LPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDH 302
           LPTDD+DYENRTRG++VQ   SSGEESGSGN GS++GRVERRFRVPLWWPFGGRNDGSD 
Sbjct: 248 LPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 307

Query: 303 GGGNDSD 310
           G GN S+
Sbjct: 308 GDGNVSE 312

[Close]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL
Match: A0A6J1K1C4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 8.0e-145
Identity = 252/307 (82.08%), Postives = 270/307 (87.95%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 62
           +AVDKPFFCHQCDRAVTV +S SSDPLCPFCNEGFLEEY+NSN+N NVNL  D  +   P
Sbjct: 8   AAVDKPFFCHQCDRAVTVILSPSSDPLCPFCNEGFLEEYENSNSNSNVNL--DRGTLLLP 67

Query: 63  HPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHPEPYDPFVFLQNHLRGIFES 122
            PF  FNPLV SSS VVDLQNPGLFSRT +   QS+SSV PE YDPFVFLQNHLRGIF+S
Sbjct: 68  DPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEQYDPFVFLQNHLRGIFDS 127

Query: 123 GADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 182
           GADVVFEIPRH+SHSG SMPQN GDYFIGPGLEQLIQLLADNDPNRYGTPPASKS IEKL
Sbjct: 128 GADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSVIEKL 187

Query: 183 STVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFE 242
             VTVTE LLNSEMNQCAVC+DGFEK T+VKQMPC HVFHDYC+LPWLELHNSCPVCRFE
Sbjct: 188 PNVTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFE 247

Query: 243 LPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDH 302
           LPTDD+DYENRTRG++VQ   SSGEESGSGN GS+ GRVERRFRVPLWWPFGGRNDG+D 
Sbjct: 248 LPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNRGRVERRFRVPLWWPFGGRNDGNDS 307

Query: 303 GGGNDSD 310
           G GN S+
Sbjct: 308 GDGNVSE 312

[Close]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL
Match: A0A6J1H9Y0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 8.5e-139
Identity = 247/314 (78.66%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 2   SSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFP 61
           S+AVDK FFCHQCDR VTV VS S +PLCPFCNEGFLEEYD  ++N N+    D RSFF 
Sbjct: 3   SAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANL----DSRSFFL 62

Query: 62  PHPFPRFNPLVFSSSMVVDLQNPGLFSRTSTPPP------QSSSSVHPEPYDPFVFLQNH 121
           P PF  FNPL FSSS VVDLQNPGLFSRT +P        QS SS  PEP+DPFVFLQNH
Sbjct: 63  PDPFRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRHQSDSSGQPEPFDPFVFLQNH 122

Query: 122 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 181
           LRGIF+SGADVVFEI  H S SGVSMPQN GDYFIGPGLEQLIQLLA+NDPNR+GTPPAS
Sbjct: 123 LRGIFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPAS 182

Query: 182 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 241
           KSAIEKL  VTVTE LLNSEMNQCAVCLDGFEKG +VKQMPC H+FHDYCLLPWLELHNS
Sbjct: 183 KSAIEKLQNVTVTEELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNS 242

Query: 242 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 301
           CPVCRFEL TDD+DYENRTRG RVQ   S+GEE GSGNSGSS+ RVER FRVPLWWPFGG
Sbjct: 243 CPVCRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGG 302

Query: 302 RNDGSDHGGGNDSD 310
           RNDGS  GGGNDS+
Sbjct: 303 RNDGSGSGGGNDSE 312

[Close]

BLAST of CaUC01G008680 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 328.9 bits (842), Expect = 4.2e-90
Identity = 171/308 (55.52%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 5   VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPR---SFFP 64
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY+  + NPN +L F+P    SFFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE--DPNPNQSLNFNPNSSDSFFP 76

Query: 65  -PHPFPRFNPLVFSSSMVV--DLQNPGLFSRTSTPPPQSS-SSVHPEPYDPFVFLQNHLR 124
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 125 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 184
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 185 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 244
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 245 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 304
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 305 DGSDHGGG 306
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]

BLAST of CaUC01G008680 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-38
Identity = 86/178 (48.31%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 144 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 203
           + GDYFIGPGL+ L+Q LA+NDPNR GTPPA K A+E L TV + E L      QC+VCL
Sbjct: 210 SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVCL 269

Query: 204 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTD-DADYENRTRGNRVQGI 263
           D FEKGT+ K+MPC H FH  C++PWLELH+SCPVCRFELP+  D D E +T   RV   
Sbjct: 270 DDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRT 329

Query: 264 GSSGEESGSGNSGSSTGRVE------------RRFRVPLWWPFGGRNDGSDHGGGNDS 309
             +  E+ +GN   + G  +            RRF  P  WPF G    S     + S
Sbjct: 330 -RNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSSSSSSTS 378

[Close]

BLAST of CaUC01G008680 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 6.4e-38
Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 144 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 203
           + GDYFIGPG E L+Q LA+NDPNRYGTPPA K A+E L+TV + E L      QC+VCL
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 204 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIG 263
           D FE GT+ K MPC H FH  CLLPWLELH+SCPVCR++LP D+A  ++ T  +   G  
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 264 SSGEESGSGNSGSSTGR 281
           S+   +  G   S   R
Sbjct: 294 SASATTSHGAENSDGNR 304

[Close]

BLAST of CaUC01G008680 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 145.6 bits (366), Expect = 6.7e-35
Identity = 103/316 (32.59%), Postives = 152/316 (48.10%), Query Frame = 0


Query: 10  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFPRFN 69
           +CH+C RAV +      +P+C +C  GF+EE D + A+P                F   +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 68

Query: 70  PL-VFSSSMVVDLQNP-GLFSRTSTPPPQSSSSVHP-------EPYDPFVFLQNHLRGIF 129
              VF  + + +  +   +  RT +  P++   + P        PY   +   N +  +F
Sbjct: 69  AFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYR--LTGDNAVEALF 128

Query: 130 ESGADVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 189
             G+             G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI
Sbjct: 129 NGGS------------PGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAI 188

Query: 190 EKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVC 249
           + L T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVC
Sbjct: 189 DALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVC 248

Query: 250 RFELP--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           R ELP  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF    
Sbjct: 249 RQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSG 301

[Close]

BLAST of CaUC01G008680 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 145.6 bits (366), Expect = 6.7e-35
Identity = 103/316 (32.59%), Postives = 152/316 (48.10%), Query Frame = 0


Query: 10  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFPRFN 69
           +CH+C RAV +      +P+C +C  GF+EE D + A+P                F   +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 68

Query: 70  PL-VFSSSMVVDLQNP-GLFSRTSTPPPQSSSSVHP-------EPYDPFVFLQNHLRGIF 129
              VF  + + +  +   +  RT +  P++   + P        PY   +   N +  +F
Sbjct: 69  AFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYR--LTGDNAVEALF 128

Query: 130 ESGADVVFEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 189
             G+             G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI
Sbjct: 129 NGGS------------PGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAI 188

Query: 190 EKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVC 249
           + L T+ + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVC
Sbjct: 189 DALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVC 248

Query: 250 RFELP--TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           R ELP  +  +  +NRT   R     SS   S S  +G+     ERR     +WPF    
Sbjct: 249 RQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSG 301

The following BLAST results are available for this feature:

BLAST of CaUC01G008680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907201.1	3.7e-160	89.35	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]
XP_004149872.1	1.2e-150	86.38	E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiq...	[more]
KAA0055876.1	2.6e-150	84.47	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3...	[more]
XP_022938450.1	1.9e-148	84.04	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023551575.1	2.5e-145	82.74	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC01G008680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	6.0e-89	55.52	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	7.3e-87	53.97	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	9.4e-34	32.59	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q6AVN2	7.9e-33	32.09	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q94AK4	1.4e-32	32.44	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of CaUC01G008680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT93	5.7e-151	86.38	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE...	[more]
A0A5A7UNL2	1.3e-150	84.47	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FJU6	9.1e-149	84.04	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684...	[more]
A0A6J1K1C4	8.0e-145	82.08	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 P...	[more]
A0A6J1H9Y0	8.5e-139	78.66	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423...	[more]

BLAST of CaUC01G008680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	4.2e-90	55.52	RING/U-box superfamily protein	[more]
AT5G56340.1	3.8e-38	48.31	RING/U-box superfamily protein	[more]
AT1G55530.1	6.4e-38	54.01	RING/U-box superfamily protein	[more]
AT2G40830.2	6.7e-35	32.59	RING-H2 finger C1A	[more]
AT2G40830.1	6.7e-35	32.59	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 199..239 e-value: 1.0E-7 score: 41.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 197..240 e-value: 1.1E-13 score: 51.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 199..240 score: 12.563043
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..41 e-value: 4.6E-13 score: 49.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 162..246 e-value: 1.4E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..281
None	No IPR available	PANTHER	PTHR15710:SF75	E3 UBIQUITIN-PROTEIN LIGASE RING1	coord: 5..289
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 5..289
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 198..240 e-value: 2.36949E-21 score: 83.136
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 178..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G008680.1	CaUC01G008680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity