CaUC01G008670 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G008670
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DEAD-box ATP-dependent RNA helicase 38-like
Location	Ciama_Chr01: 9908507 .. 9916407 (-)
RNA-Seq Expression	CaUC01G008670
Synteny	CaUC01G008670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACCACGCAGGACATCAGCCCAAAAACTTTTCAACCATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTAACTCTCTCATTCTCTCCATCAATTGTGTTCGAAGTAGGAAGTAGAGCAATGCGGGGCTCCTTGTTATGCTATTCGTTTAATTATTTTCCATTTGGGGTAGGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGAATGTTGAGTCGTGTTGATGTGAACTTGAAGACTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGGTAAAAAGCTCTCTCTGATGTTTAACTGAATGCCTTTGGCTCTTATTTATGTTAGATCTTGATTTTTCTTTGATATAATTATTGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACGCTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATAACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGTAAATTATTATGTATAGACTTTACATATTGTAGCATCTGTGTCCATGGAAGTAGTGATCTCCTCTTGATTTGTTTTTCAAGAACATAGTTTCTTAATGTATATAAACGTATCACTAATGATAGGCTAAGAGTAATAGTTATTTTGAGCAATTGTGAGGATGGATAAATTATAGTTATTTTTCCTTTTTTTTAATTTTTTTTAAAAATTTTTTTATTCAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTCTGTATATACTATTAAATAACCATTTTGTAATCTCAACCATGTAATCTCAGTAATCTCATTCTTCCTTTTTTTTATTGTTAAAAACTTTGTTTCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTTGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTATGGATATTAGTTCCCCATCCTTCCTTTTGTCTGTTGATTGTATATCCCGTGACAGTCTTCTCGGACCCCTAATATATGTTTCTTTTGTAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTCCACAAGCGACGAAATATAGATCTTCCTCATTGTCTGAGCCTAACTACGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGTAAGTCTCCGTTTCTATTACACTTACGTAGCTATGTTTGTATATTCTTGTAATCTTCCAGCCCTAACCCTGGATATGCCTTCATGTCCTTGATTGTCGAAGCTAAGCAACTTTATAGGGATTAGAATCAATCTCTTAAACTAGCTCCTTAATATTGCATCATCCATATTAGAATCTATTTCTTTGTTTGAATTACAGAGGGGAGTTGGAATCCATGTGATGTAAACAAGTTGAGGGACAAAGAGTTTATGAAAAAATACTTCTTGAATGAATTACTCAATTCAAAGGAGGCAGCTTTACCACACGGCAATTACTAAAACTTAAACAACAGCCTACTAAAACATAACTAAACAACAAACAATTAAAGGAAATATAAGTCTCAAACAGTCCCAAACAAGAAACTACCCCAATCGCGGAAGGAATATTTGTCAAATCAATAGTTAATCTAGGAAGTTAATATAGACAATTTCAAATGGTGACTTCCCTATTGTCCTATTATTCATATGATTGTAGGCGAATTCTGCTTGAGGAAGGGAGAGATCCCATTGTTTTGGTCGATCATTGCTCAAGCATTGAATTAGATTACCAAGAACCCAATTAATTACCTTTGTTTGGTCATTGGTTTGAGGATGGTTAGTTGTGAACTTTTTTCACAATGTCTTCCAAAAGTATCAAAGAGGGTGTTTGGGGTAAGGAGTGGAATAGTGAGGAGTAAGGAGTTATGAAATCTAGGGAGTTGTGAACTCCTAGGGCCCACAGTGTAAGGAGTTGATAAGATATAAAATTGATGTTTCTTAGTAGTGGGCCCCACCAACTCCTTGAGCCAAACAAGGAGTGGAGTTCACAAACTCCAACTTCCATACTCCTACTTCACAACTCCTTGGGCCTAACACACCCTGAGAAACTTAACATCCCTGTCCAAGACAATGAATTTTGGTATGCCATTTAATTGAACAATTTCCTTAAAGAATAGGTTACCCACATAAATTGCGTTGGATGTTTTCTTGCAAGGTAAAAAATGAGACAGCTTGCTGAACTTATCAACCAACAAGAACTGAGTCGAACCCCGTTGAGTTTTAGGAAGACCAAGGATAAAATCCATGGATAAGTCTTCCCAAATACTCTCCAGAATAGGTAGTGGGCAATAGAGCCCCGTGTTTTGTTTCTGTCCCTTTGCTGTTTGGCAAGTAAAGCATCTTTTAACATAGTTAGAGACATCTTTTCTCAATTGAGGCCAAAAGTATCTATCACTCATAAGTTGGAAGCTTTTATCCTTACCAAAATGACCGGCTAGGCCTCCTCCATGCAGTTCTTCACTCTCGAAGAGATGTATGTGGAATACACAATTGATTGTTCTTAAAAGGTAACCATTGACCATTGGAATTTACCACAATTGACACGACCATTACAATTATGCCAAAGGGTACCAAAATCATCCTCGTTTGTATATAAAGATGGGAGTTGATCAAATGCTACCACAGAACCCTTAAGAAGAGTTAAAAAGATCCATTTTCCTACTTAAGGCGTCGAGTACAACGTTATTAGTTCCAGCTTCATGTTTTATGCAAAATCAAACCTTTGAATAAATGATAACCAATGAGCATGCATTTGGTTGACGGACTTTTGCGTCTGCAAATACTTAAAAGAATAGTAAAACTAAATGAATTCTTTACCCAAGAGATAATGTTCCAAACCTTTAAAGCACAGGCCAATGAGTACAATTCTGGGTCATAAGTACTCCATTTTTGGCGAGGAAGACTCAACTCTTCACTGAAAAATTTGATGGGATGGTCACCTTGGGATAAGACAGCTCCAATTCCAAAACCAGATGCATCCACGACCACTTTAAAGGGTCAAGGGAAATCTGTTAAAGCGGGGACTGGTGCTGAGCATAATTTTTGTTTGAGGAGCTCGAAACTGTCCGGTTGTATTTCTCCCCATTGCCAACTATCTTTCTTAAGAAGTTATAGGAGTAGTTATGGTGCTGACATTTTGTATGAACTTCCGGTAAAAAACGAAGCAAGACCTAAAAGACTTCGATTTTCCTTAATACTGGATGGTTGAGGCCATTCTTTAATTGCTTGAATTTTAGATGGGTCCATTGAAACACCAAACTTATTAATAATAAATCCAAGAAAAGAAACAGAATTAATCATAAAGAACATTTCTTGAAATTAATGAAGAGTTGATTATCGTGGAGAGTTTTAAACAAGGTGTGTAAATGAGACAAATGTTCTTCATGATTCTCACTATAAATAAGAATATTGTCAAAATAGACTTCAAAGAATTTATTTAAGGCTGAAGAACCTGTGTCATAAGTTGCATAAACATACTCGGGGCATTAGATAACCCAAAGGGCATCACTAGCCATTCAAATAAACCTTCATTTATCTTGAAGGTTGTTTTCTTCTCATCTCCTGACTTAATTCGAATTTGATGATATCCACTCTTTAGATCTATTTTGAGAAAATCACAGCTCCCCCTAGTTGATCCAAAAGATCGGCAATTCTTGGAATTGGGAACCTATATTTAATGTTTATCTTATTGATGGCCCTACTATCAATGCACATACGCCAAGTTCCATCTTTTGGGGGTTAATAAAGTTAGAACTGTGCATGGACTTAAACTAGGACGAATATATCCCTTATCCAATAATTCTTGAACTTGTTCTTGTAGAATCTTGTAATCCCCTGGACTCATTCGGTAGTGAGGTAAATTTGGTAAAACGAGCTATGGAGGAAGTCAATTTGGTGCTGAATGTTCCTTAGCGGTGGAGGTATGAAGGTGTTTCCGTAATATTTGGAAATTCTTCCAACAAATGTTGAATCTCCTTATTGACAATATACTCACACACTATTTTCTTGGCCATCCACAATTAGAGCCCAAACTTCCATGTCTTCTTTTGAAATAAATGGTTCTTTATGAATGATTGGAAAAAGTTGCTTGTTGGGAGTTTCTTCAACATTTTTCTTAGTCACATTTTCACCCTTTGAAGGTAAAAGAATCACTTTATGTCTCATCCAGTTGAACTTGTAGGTATTATCTCTTCCTCGGTGTAATGTTTGAAGATCATGCTGCCATGGGTGTCCTAACAAGATATGGCAAACATTCATATCAAGAACATCACAAATAACTTGATCCTTATATACTACCAATTGAAAGAGTAGTAGTACAAGTAAAACTTATCTGAGCCTTTCCTCCCTTCTTTGTCCAATTGATATTATAAGGTTGAGGATGTAAATCCATCTTGAGCTTAAGGGCATTGACTAGTTTCGAAGACACATTATTTTTGCTACTTCCACTATCTATGATTATGTTGACCTTGCCATTAATAGTGCATCTTGTTCAGAAAAGAGCATATCTTTGAGGGTGTATCTTAGTTTTTGGAGTTAACAAAATTCTTTGTAGAATGCAAGACAATTGGTCCCCCTCATTTGGTTCTAAAAATGCTACTTCATCTTCATCATAAACTTCATTTTCTCCGAAATCTTGCTCATCTTCATCTACTATGGTTATAGCTCTTCTTTGAGGGCATTCATTGGATAAATGTCCTTGCTGTCCACCGCGTAAACACTTTCCTAAATTTGGTCTTTGATAAGTATTGTTGGTACCTCCTTCTTTAATTGGAGTTTCTTGAATCTTGATTCCTTGCTATGTTTTTTTGCTGAGGATCATCTTTTGTTTTACTGGTTGAACAATTGTTCGCTTGAATTTGTTTAGTGAATTCAGTGTTCTTTCTTTGAAAAGGGGCAGATCTGTTATCCCAAGAATTCCTTCTTGCTGAAGATGTTTTCTGTTTCTTCTCCATTTTGATTTCTGCTTTATACGCCATGGTAATTGCTGCTGAAAGAGTGCTAATCAACTGTAAGTCCATTTGTTCTTGGAGTTCTTCTTTCAATCCATTAACAATCTTGCAACTTGGTAATTCTCACCTTCATTCAATCTTGTTCTTGCACTAAACGATTGAATTCTTCAGCATAATCAGCTATGCTTCTACTCCATTGTTTATACTCTTGGTAATGTTGGTATAGGAGTTGTTCATAGTCAGTTGGAAGAAAGCAAGTCTTCATTACCCTTAACATTTTTGGCCAGCTCGTAATGGGTCTTTTCCCTGTTTAATGACGATTAGTTTGAACTTGATCCAGACCTAAGTTTCAAAGGGACCAACTTTACTTTTTTGTGTTTGGGGTATTCATGAGTCAAAGAAGCTTTCTACACACTTGTTGACGTTCATGTAGTCAAATGCTTCAAGATCTAGCTTCCCGCCAAAGATGGGCAGATCGATCTTCATTTTATAATCTTGTTGATGTTCTTCTTGATTTTGGTGATGATTTCTTCTTAAAAAATTCCTTCCTTCTGGGTAATCTCTCAAAAATCACCCTCATCCAAAGAAGATTTGGGATCTTGATCTTGAATATATGGCTCTTGAAATCTTTGTTGCCGATTCTCCCCTCTGTTTCTTTCAGGCTAATTATTTTTCTCTGTGTTTGGGTGGTATCTTCCACCTCTTTGAATAGGATTTTGTTCTTGAGTTCCAAGTCTAGCATCTCCTTTGTTTTCCAGGCGCTGTACAGCTTGTGTTGGTTAACCAATTGTTCCAGTTGTGCCATTGTTCCCATCAGCAAATGCATATTGTCCATGCTTGTCTGAATTTCATCCATTGAATTCTCAACTGCCAGCAAGCGCACAGTCATTGATTTCCGAAGGATTGAGTTGGGCTTCGGCGTCCTTAATTCGAATGGTAGTCACGACGTCCTTCCCAGTCATGAGGCCCACAAAATCTTGGAGCTCTTGATACCAACTTGATGTAAACAAGTTGAGGGAGAAAGAGTTTATGAAAAAATATTTCTTGAACTGAATTACTCAAGGAGCCAGCTTTTATACTGGATCTTGAATCAAATCAACACAATCACTAAAGGTTAAAAGAATTACCACACGGTAATTACTATAACTTAAACAACAGCCTACTAAAACATAGCACTAAACAACAACAATTGAAGGAAATATAAATCTCAAATAGTTCCGAACAAGAAACTACATCACCATGCGACTACGAAGTTGCTTTTTTATTGATTTGCAAACTCTTTTGTAGTATTAATTGCAAAGAAGGATCCTTAAGTAGACATTCTTTTGGTATTTTGTTAACTGACAACCCATGGCTGTTGTGTTATTCTACAGGAGCTGTGTTTAACTTGCTGTGTGGTGATGAGGAAATCATGCAAATGGACAAAATTCAGAACCATTTTGGCTCCGAAATAATGGACGTAAGTTCCCTTCTCTGGTTGGCAACATTTGAATTCCACTCATTTCCTGATCTGCCTGGATATTGAATTTCTATCTCAGTACCTTTTGAAATTTGAATTTCAGGTTCGAGACTCCGATGAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGGTTTGATGTATAGAAAAGAGTTTATCGTACCTGATTTCCATTGATGCCAACCACGCACCAAAGCTGATAAAACTTGGTAACAGTTGGATGCAGAAAAGTGGATCCAAGCCATCGCTTCACAGTTTTTGTTTTACTTTAAAGTTCAAAGGAAATTACATCTGGTTATGATATTTAGTGTGTTTGAGTTGGCAATTTCTGGCGTTATGGTTTAGACTGTATATATTGTGAAGGGTTATGTTTGCTGAAATCTCTTTGATTGATGAAATCTGTTGAAATGAATAGCCATTGTAAACAAATGTATTTTATCTGTAAATGAAACATAAATCTCCTGCTTATTTGTATTTCAAAGAAATCATTGGATCATAGAATTGGTAAAACCAAAGCATTTGTTTAGGGGTGATCTATTTGCAATGAAGATAGAACCTGTTTAGAGCAACCTTCAAATTTGGTTCTCAACTTTCTAGGTAACACTGTGTCGTTTGTACTTGGAGACTTCTCTTCTCTTTGGAGGAAACATGATACATATTTATATAT

mRNA sequence

CTCCACCACGCAGGACATCAGCCCAAAAACTTTTCAACCATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTAACTCTCTCATTCTCTCCATCAATTGTGTTCGAAGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGAATGTTGAGTCGTGTTGATGTGAACTTGAAGACTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACGCTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATAACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTTGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTCCACAAGCGACGAAATATAGATCTTCCTCATTGTCTGAGCCTAACTACGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGATGAGGAAATCATGCAAATGGACAAAATTCAGAACCATTTTGGCTCCGAAATAATGGACGTTCGAGACTCCGATGAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGGTTTGATGTATAGAAAAGAGTTTATCGTACCTGATTTCCATTGATGCCAACCACGCACCAAAGCTGATAAAACTTGGTAACAGTTGGATGCAGAAAAGTGGATCCAAGCCATCGCTTCACAGTTTTTGTTTTACTTTAAAGTTCAAAGGAAATTACATCTGGTTATGATATTTAGTGTGTTTGAGTTGGCAATTTCTGGCGTTATGGTTTAGACTGTATATATTGTGAAGGGTTATGTTTGCTGAAATCTCTTTGATTGATGAAATCTGTTGAAATGAATAGCCATTGTAAACAAATGTATTTTATCTGTAAATGAAACATAAATCTCCTGCTTATTTGTATTTCAAAGAAATCATTGGATCATAGAATTGGTAAAACCAAAGCATTTGTTTAGGGGTGATCTATTTGCAATGAAGATAGAACCTGTTTAGAGCAACCTTCAAATTTGGTTCTCAACTTTCTAGGTAACACTGTGTCGTTTGTACTTGGAGACTTCTCTTCTCTTTGGAGGAAACATGATACATATTTATATAT

Coding sequence (CDS)

CTCCACCACGCAGGACATCAGCCCAAAAACTTTTCAACCATGGAATTACCGGCTACTAGCGACGAGTCGACCACCGCCACTGTCACCGTCGGCTCGAGTTCTGCCCCACCTGTGCCCAAACGAGCTTGGGGCGATGAAGATGATGATGTGGGTGAACACTTGGAATCCCTTACAATAAATCTTGAAGAACCCGTGGACTCCGACATCTCGGTAACTCTCTCATTCTCTCCATCAATTGTGTTCGAAGTGACAACCGGTGATACTCCATATACATCAGCCAGTTCTTTTGAGGATCTGAATCTGTCTCAAGAGTTGTTGAAGGGTTTGTATGTTGAGATGAGATTCCATAAGCCAAGTAAAATTCAAGCTATAACTTTACCCATGATCTTGACTCCTCCTTACAAGGATTTAATTGCTCAAGCTCATAATGGTTCTGGAAAGACTACCTGTTTTGTGCTTGGAATGTTGAGTCGTGTTGATGTGAACTTGAAGACTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTTAAGAAAATGGGAAAATACGCTGGGATAACTTCAGAGTGTGCTGTTCCCGCTGACAGTGCTAATTATGTACCCATGTCAAAGCGACCACCAATAACTGCGCAAGTTGTGATTGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTCGGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCGTTGAGAATCATGAGGGACATTGAGAGAAGTAGCCCTCATTGCCAGGTGCTTTTGTTCTCTGCTACATTTGATGAGAATGTTAAAAACTTTGTCTCTAGGGTTGTTAAAAAAGACTACAACCAACTTTTTGTGAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCAGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGCACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGATGTGACTACCATTCAAGGGGCACTGACGACTGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAACAGGTCAATCTAGTTATCAATTATGATCTTCCTCTTAAATATGAATCTTCTCCACAAGCGACGAAATATAGATCTTCCTCATTGTCTGAGCCTAACTACGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGTGATGAGGAAATCATGCAAATGGACAAAATTCAGAACCATTTTGGCTCCGAAATAATGGACGTTCGAGACTCCGATGAGGACATTCAAGCAGCCTTAAAAACTGCCGGATTGGTTTGA

Protein sequence

LHHAGHQPKNFSTMELPATSDESTTATVTVGSSSAPPVPKRAWGDEDDDVGEHLESLTINLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV

Homology

[Close]

BLAST of CaUC01G008670 vs. NCBI nr
Match: XP_038876100.1 (DEAD-box ATP-dependent RNA helicase 38-like [Benincasa hispida])

HSP 1 Score: 856.3 bits (2211), Expect = 1.3e-244
Identity = 453/513 (88.30%), Postives = 467/513 (91.03%), Query Frame = 0


Query: 18  ATSDESTT---ATVTVGSSSAP----PVPKRAWGD-EDDDVG----------EHLESLTI 77
           A +D STT   A  TVGSSSAP    PVPKRAWGD EDDDVG          E+LESL I
Sbjct: 5   AAADSSTTNASAAATVGSSSAPPVVTPVPKRAWGDEEDDDVGDTGDSSSAPSEYLESLKI 64

Query: 78  ----NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRF 137
               NLEEP+DS+I+            VTTGDTPYTSAS+FEDLNLS+ELLKGLYVEM+F
Sbjct: 65  EDESNLEEPIDSNITA-----------VTTGDTPYTSASTFEDLNLSKELLKGLYVEMKF 124

Query: 138 HKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTR 197
           HKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTR
Sbjct: 125 HKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTR 184

Query: 198 ELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSR 257
           ELAMQNIEVLKKMGKY GIT ECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSR
Sbjct: 185 ELAMQNIEVLKKMGKYTGITFECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSR 244

Query: 258 KLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVS 317
           KLGV SVKILVFDEADHMLGEDGFQDDSLRIMRDIERS+PHCQVLLFSATFDENVKNFVS
Sbjct: 245 KLGVGSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSNPHCQVLLFSATFDENVKNFVS 304

Query: 318 RVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTR 377
           RVV KDYNQLFVKKEELSLESVKQYKLICPDEL KIRVIKDRIFELADKLGQTIIFVRTR
Sbjct: 305 RVV-KDYNQLFVKKEELSLESVKQYKLICPDELAKIRVIKDRIFELADKLGQTIIFVRTR 364

Query: 378 NSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN 437
           NSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN
Sbjct: 365 NSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVN 424

Query: 438 LVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM 497
           LVINYDLPLKYESS QATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM
Sbjct: 425 LVINYDLPLKYESSSQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM 484

Query: 498 QMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           +M+KIQNHFGSEI++VRDSDEDIQAALKTAGLV
Sbjct: 485 RMNKIQNHFGSEIIEVRDSDEDIQAALKTAGLV 505

[Close]

BLAST of CaUC01G008670 vs. NCBI nr
Match: XP_008463114.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo] >XP_016902981.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo])

HSP 1 Score: 844.7 bits (2181), Expect = 4.1e-241
Identity = 446/512 (87.11%), Postives = 461/512 (90.04%), Query Frame = 0


Query: 18  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI- 77
           +TSD S   A VT  SSSAP     PVPKRAWGDE+DD             E+LESL I 
Sbjct: 9   STSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQ 68

Query: 78  ---NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFH 137
              NLEEP+DS+I+            VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FH
Sbjct: 69  DETNLEEPIDSNITA-----------VTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFH 128

Query: 138 KPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRE 197
           KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTRE
Sbjct: 129 KPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRE 188

Query: 198 LAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRK 257
           LAMQNIEVLKKMGKY GITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRK
Sbjct: 189 LAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRK 248

Query: 258 LGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSR 317
           LGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSR
Sbjct: 249 LGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSR 308

Query: 318 VVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN 377
           VV KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN
Sbjct: 309 VV-KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN 368

Query: 378 SAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL 437
           SAGMLHKALVDLGY+VTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL
Sbjct: 369 SAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL 428

Query: 438 VINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQ 497
           VINYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM 
Sbjct: 429 VINYDLPLKYEPSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIML 488

Query: 498 MDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           MDKIQNHF SEI++VRDSDEDIQAALK AGLV
Sbjct: 489 MDKIQNHFRSEIIEVRDSDEDIQAALKAAGLV 508

[Close]

BLAST of CaUC01G008670 vs. NCBI nr
Match: XP_004150128.2 (DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8648330.1 hypothetical protein Csa_023068 [Cucumis sativus])

HSP 1 Score: 842.0 bits (2174), Expect = 2.6e-240
Identity = 441/510 (86.47%), Postives = 458/510 (89.80%), Query Frame = 0


Query: 19  TSDESTTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI--- 78
           TS  +  A  T  SSSAP     PVPKRAWGDE+DD             E+LESL I   
Sbjct: 11  TSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQDD 70

Query: 79  -NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKP 138
            NLEEP+DS+I+            VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FHKP
Sbjct: 71  TNLEEPIDSNITA-----------VTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKP 130

Query: 139 SKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELA 198
           SKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTRELA
Sbjct: 131 SKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA 190

Query: 199 MQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLG 258
           MQNIEVLKKMGKY GITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLG
Sbjct: 191 MQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLG 250

Query: 259 VSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV 318
           VS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV
Sbjct: 251 VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV 310

Query: 319 KKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSA 378
            KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSA
Sbjct: 311 -KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSA 370

Query: 379 GMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI 438
           GMLHKALVDLGY+VTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI
Sbjct: 371 GMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI 430

Query: 439 NYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMD 498
           NYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM MD
Sbjct: 431 NYDLPLKYEPSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMLMD 490

Query: 499 KIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           KIQNHF SEI++VRDS++DIQ ALK AGLV
Sbjct: 491 KIQNHFRSEIIEVRDSEDDIQTALKAAGLV 508

[Close]

BLAST of CaUC01G008670 vs. NCBI nr
Match: XP_038906287.1 (DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906289.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida])

HSP 1 Score: 834.7 bits (2155), Expect = 4.2e-238
Identity = 443/525 (84.38%), Postives = 466/525 (88.76%), Query Frame = 0


Query: 4   AGHQPKNFSTMELPATSDESTTATVTVGSSSAP----PVPKRAWGD-EDDDVG------- 63
           A H   + +T +  A++  + TAT T GSSSAP    PVPKRAWGD EDDDVG       
Sbjct: 2   ADHAAPDSTTSD--ASAPAAATATATDGSSSAPPIVTPVPKRAWGDEEDDDVGDTGDSSS 61

Query: 64  ---EHLESLTI-----NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQ 123
              E+LESL I      L+EP+DS+I+            VTTG TPYTSAS+FEDLNLS+
Sbjct: 62  APSEYLESLKIEDDETTLDEPIDSNITA-----------VTTGGTPYTSASTFEDLNLSK 121

Query: 124 ELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNL 183
           ELLKGLYVEMRFHKPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNL
Sbjct: 122 ELLKGLYVEMRFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNL 181

Query: 184 KTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIG 243
           K PQAFCICPTRELAMQNIEVLKKMGKY GITSECAVPADSANYVPMSKRPPITAQVVIG
Sbjct: 182 KAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIG 241

Query: 244 TPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFS 303
           TPGTIKKWMSSRKLGVS V+ILVFDEADHMLGEDGFQDDSLRIM+DIERSSPHCQVLLFS
Sbjct: 242 TPGTIKKWMSSRKLGVSCVRILVFDEADHMLGEDGFQDDSLRIMKDIERSSPHCQVLLFS 301

Query: 304 ATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELAD 363
           ATFDENVK FVSRVV KDYNQLFVKKEELSLESVKQ+KLICPDELTKIRVIKDRIFELAD
Sbjct: 302 ATFDENVKKFVSRVV-KDYNQLFVKKEELSLESVKQFKLICPDELTKIRVIKDRIFELAD 361

Query: 364 KLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTD 423
           KLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALT +IRDKIIKEFKDGLTKVLISTD
Sbjct: 362 KLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTNDIRDKIIKEFKDGLTKVLISTD 421

Query: 424 LLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGA 483
           LLARGFDQQQVNLVINYDLPLK+E S QATKYRSSS S+PNYEVYLHRIGRAGRFGRKGA
Sbjct: 422 LLARGFDQQQVNLVINYDLPLKHEPSLQATKYRSSSSSDPNYEVYLHRIGRAGRFGRKGA 481

Query: 484 VFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           VFNLLCGDEEI +MDKIQ HFGSEI++VRDSDEDIQAALKTAGLV
Sbjct: 482 VFNLLCGDEEIARMDKIQKHFGSEIIEVRDSDEDIQAALKTAGLV 512

[Close]

BLAST of CaUC01G008670 vs. NCBI nr
Match: XP_022935217.1 (DEAD-box ATP-dependent RNA helicase 38 [Cucurbita moschata] >KAG7017403.1 DEAD-box ATP-dependent RNA helicase 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 802.7 bits (2072), Expect = 1.8e-228
Identity = 423/516 (81.98%), Postives = 450/516 (87.21%), Query Frame = 0


Query: 17  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLES 76
           PA  D +T+      A V V +++ P   PVPKRAWGD EDDDVG          E++ES
Sbjct: 4   PAAPDSTTSNASSAAAAVAVSATTPPVVTPVPKRAWGDEEDDDVGDVGDSSSAPSEYMES 63

Query: 77  LTI----NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVE 136
           L I     LEEP DS+I+            VTTGDTPY+SAS+FEDLNLS E+LKGLYVE
Sbjct: 64  LKIQDEKTLEEPEDSNITA-----------VTTGDTPYSSASTFEDLNLSPEILKGLYVE 123

Query: 137 MRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCIC 196
           M+F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCIC
Sbjct: 124 MKFQKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCIC 183

Query: 197 PTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM 256
           PTRELAMQNIEVLKKMGKY GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM
Sbjct: 184 PTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM 243

Query: 257 SSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN 316
           SSRKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKN
Sbjct: 244 SSRKLGVSCVKILVFDEADHMLSEDGFRDDSLRIMRDIEKSSPHCQVLLFSATFDETVKN 303

Query: 317 FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFV 376
           FVSRVV KDYNQLFVKKEELSLE VKQYK+ICPDEL KIR+IKDRIFEL +KLGQTIIFV
Sbjct: 304 FVSRVV-KDYNQLFVKKEELSLEGVKQYKVICPDELAKIRIIKDRIFELGEKLGQTIIFV 363

Query: 377 RTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQ 436
           RTRNSA MLHKALVD GYDVTTIQGALTTE RDKIIKEFKDGLTKVLISTDLL+RGFDQQ
Sbjct: 364 RTRNSASMLHKALVDYGYDVTTIQGALTTEDRDKIIKEFKDGLTKVLISTDLLSRGFDQQ 423

Query: 437 QVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDE 496
           QVNLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD 
Sbjct: 424 QVNLVINYDLPLKYESSSEAMKFRSSSQSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDV 483

Query: 497 EIMQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           EIM+MDKIQNHF SE+ +VRDSDEDIQAAL+TAGL+
Sbjct: 484 EIMRMDKIQNHFNSEVTEVRDSDEDIQAALRTAGLL 507

[Close]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot
Match: Q93ZG7 (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2)

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-159
Identity = 304/508 (59.84%), Postives = 389/508 (76.57%), Query Frame = 0


Query: 15  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTINLEEPVD 74
           ++P   + S+++TV   +S   + P   K+ WGD +DD  E      L SL+I  EE  D
Sbjct: 7   KVPTVVESSSSSTVEASNSAEKTEPTTEKKKWGDVEDDDDEEEAVSELNSLSIKEEEKPD 66

Query: 75  SDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITL 134
           S +        S +  VT+GDTPYTSAS FEDLNLS EL+KGLYVEM+F KPSKIQAI+L
Sbjct: 67  SILEEP---EDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISL 126

Query: 135 PMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLK 194
           PMI+TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+
Sbjct: 127 PMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQ 186

Query: 195 KMGKYAGITSECAVPADSANYVPMSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKIL 254
           KMGK+ GIT+E AVP DS    P + R  P++A VVIGTPGT+KKWM+ ++LG++ +KIL
Sbjct: 187 KMGKFTGITAELAVP-DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKIL 246

Query: 255 VFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQL 314
           VFDEADHML  DGF+DDSL+IM+DI R +P+ QVLLFSATF+E VK+FV+R V KD NQL
Sbjct: 247 VFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTV-KDPNQL 306

Query: 315 FVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKAL 374
           FVK+E+L+L+SVKQYK++CP E  KI VIKD+I EL D +GQTIIFV+T+ SA  +HKAL
Sbjct: 307 FVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGD-IGQTIIFVKTKASAQKVHKAL 366

Query: 375 VDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLK 434
            ++GYDVT++ G LT   RDKI+KEFK+ LT+VLI+TD++ARGFDQQ+VNLV+NY+LP K
Sbjct: 367 AEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTK 426

Query: 435 YESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQN 494
           YE+             EP+YEVYLHR+GRAGRFGRKGAVFNLL     D+E+  M+KI+ 
Sbjct: 427 YET------------GEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEV--MEKIEK 486

Query: 495 HFGSEIMDVR--DSDEDIQAALKTAGLV 509
           +F + + +++  +S+E+ ++ALK AGL+
Sbjct: 487 YFEANVKEIKSWNSEEEYKSALKEAGLL 494

[Close]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot
Match: Q10RI7 (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0158200 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 4.5e-150
Identity = 276/428 (64.49%), Postives = 331/428 (77.34%), Query Frame = 0


Query: 83  VTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAH 142
           VT+G T Y SA++FEDL L+ ELLKGL+ EM F +PSKIQA+TLPMILTPPYKDLIAQAH
Sbjct: 89  VTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAH 148

Query: 143 NGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPA 202
           NGSGKTTCFVLGMLSRVD N K  QA CICPTRELA QN  VL +MGK+ GIT  CA+P 
Sbjct: 149 NGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITCACAIPP 208

Query: 203 DSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDD 262
              +YVP++K P IT QVVIGT GT+ KW++ +K+  + +KILVFDEADHML EDGF+ D
Sbjct: 209 AQKDYVPIAKMPKITDQVVIGTSGTLMKWINHKKILTNDIKILVFDEADHMLAEDGFRSD 268

Query: 263 SLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKL 322
           S RIMRDI+RS+  CQVLLFSATF+E VK+FV+RV+ KD NQ+FVKKEEL+LE VKQYK+
Sbjct: 269 SERIMRDIQRSAGGCQVLLFSATFNERVKDFVTRVI-KDGNQIFVKKEELTLEKVKQYKV 328

Query: 323 ICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTE 382
             PDE  KI VIKD+IFE   K+GQ IIFVRT+ S   +H AL    Y  ++IQG+L   
Sbjct: 329 QVPDERAKIAVIKDKIFEFGQKVGQVIIFVRTKQSTKDVHNALTLEDYVCSSIQGSLDQS 388

Query: 383 IRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSE 442
            R+KII+EFK+G TKVLISTD+LARGFDQ QVNLVINYD+P+K+            +  E
Sbjct: 389 EREKIIQEFKNGYTKVLISTDVLARGFDQAQVNLVINYDMPIKF-----------GTRDE 448

Query: 443 PNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRD--SDEDIQA 502
           P+YEVYLHRIGRAGRFGRKGAVFNLLCG+ +   M KI+ +F   + +VR+  S+ED + 
Sbjct: 449 PDYEVYLHRIGRAGRFGRKGAVFNLLCGETDNTVMRKIETYFQHNVPEVRNWQSEEDFER 504

Query: 503 ALKTAGLV 509
           ALK AGLV
Sbjct: 509 ALKDAGLV 504

[Close]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot
Match: Q9UHL0 (ATP-dependent RNA helicase DDX25 OS=Homo sapiens OX=9606 GN=DDX25 PE=1 SV=2)

HSP 1 Score: 301.6 bits (771), Expect = 1.7e-80
Identity = 172/411 (41.85%), Postives = 253/411 (61.56%), Query Frame = 0


Query: 88  TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGK 147
           +P  S  +FE+L L +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GK
Sbjct: 91  SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGK 150

Query: 148 TTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANY 207
           T  FVL MLSRV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N 
Sbjct: 151 TAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFC--VDVQVMYAIRGNR 210

Query: 208 VPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDEADHMLGEDGFQDDSLRI 267
           +P  +   IT Q++IGTPGT+  W    KL  ++ +++ V DEAD M+   GF D S+RI
Sbjct: 211 IP--RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRI 270

Query: 268 MRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPD 327
            R +      CQ+LLFSATF+++V +F  R++  D N + ++KEEL+L +++QY ++C  
Sbjct: 271 QRAL---PSECQMLLFSATFEDSVWHFAERII-PDPNVIKLRKEELTLNNIRQYYVLCEH 330

Query: 328 ELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDK 387
              K + + +    +   +GQ IIF +TR +A  L   ++  G+ V+ + G LT E R  
Sbjct: 331 RKDKYQALCNIYGSIT--IGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRAS 390

Query: 388 IIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYE 447
           II+ F+DG  KVLI+T++ ARG D +QV +V+N+DLP+K                EP+YE
Sbjct: 391 IIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG-------------EEPDYE 450

Query: 448 VYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDED 498
            YLHRIGR GRFG+KG  FN++  D E+  + KIQ+HF S I  +   D D
Sbjct: 451 TYLHRIGRTGRFGKKGLAFNMIEVD-ELPSLMKIQDHFNSSIKQLNAEDMD 476

[Close]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot
Match: Q2TBP1 (ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-80
Identity = 187/458 (40.83%), Postives = 273/458 (59.61%), Query Frame = 0


Query: 45  DEDDDVGEHLESLTINL--EEPVDSDISV-TLSFSPSIVFEVTTGDTPYTSASSFEDLNL 104
           DEDD V     SL   L  +  V+S   V  L   PS         +P  S  +FE+L L
Sbjct: 54  DEDDVVDLAANSLLNKLIRQSLVESSHRVEVLQKDPS---------SPLYSVKTFEELRL 113

Query: 105 SQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDV 164
            +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GKT  FVL MLSRV+ 
Sbjct: 114 KEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNA 173

Query: 165 NLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVV 224
               PQ  C+ PT ELA+Q   V+++MGK+        + A   N +P  +   +T Q+V
Sbjct: 174 LKLFPQCLCLAPTYELALQTGRVVERMGKFC--VDVQVMYAIRGNRIP--RGTDVTKQIV 233

Query: 225 IGTPGTIKKWMSSRKL-GVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVL 284
           IGTPGT+  W   RKL  ++ +++ V DEAD M+   GF+D S+RI R +      CQ+L
Sbjct: 234 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRAL---PSECQML 293

Query: 285 LFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFE 344
           LFSATF+++V  F  R++  D N + ++KEEL+L +++QY ++C +   K + + +    
Sbjct: 294 LFSATFEDSVWQFAERII-PDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGG 353

Query: 345 LADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLI 404
           +   +GQ IIF +TR +A  L   ++  G+ V+ + G LT + R  II+ F+DG  KVLI
Sbjct: 354 IT--IGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 413

Query: 405 STDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGR 464
           +T++ ARG D +QV +V+N+DLP+             +   EP+YE YLHRIGR GRFG+
Sbjct: 414 TTNVCARGIDVKQVTIVVNFDLPV-------------NQAEEPDYETYLHRIGRTGRFGK 473

Query: 465 KGAVFNLLCGDEEIMQMDKIQNHFGSEI--MDVRDSDE 497
           KG  FN++  D+  + M KIQ+HF S I  +D  D DE
Sbjct: 474 KGLAFNMIEVDKLPLLM-KIQDHFNSSIKQLDPEDMDE 477

[Close]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot
Match: Q9QY15 (ATP-dependent RNA helicase DDX25 OS=Mus musculus OX=10090 GN=Ddx25 PE=1 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-79
Identity = 187/472 (39.62%), Postives = 281/472 (59.53%), Query Frame = 0


Query: 30  VGSSSAPPVPKRAWGDEDDDVGEHLESLTINLEEPVDSDISVTLSFSPSIVFEVTTGD-- 89
           + S++ P +      ++DDD  + +  L  N    ++  I  +L  S   V EV   D  
Sbjct: 35  IRSTTVPNIDGSLNTEDDDDDEDDVVDLAAN--SLLNKLIRQSLIESSHRV-EVLQKDPS 94

Query: 90  TPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGK 149
           +P  S  +FE+L L +ELLKG+Y  M F++PSKIQ + LPM+L  P ++LIAQ+ +G+GK
Sbjct: 95  SPLYSVKTFEELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGK 154

Query: 150 TTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANY 209
           T  FVL MLSRV+     PQ  C+ PT ELA+Q   V+++MGK+        + A   N 
Sbjct: 155 TAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC--VDVEVMYAIRGNR 214

Query: 210 VPMSKRPPITAQVVIGTPGTIKKWMSSRKL-GVSSVKILVFDEADHMLGEDGFQDDSLRI 269
           +P  +   +T Q++IGTPGT+  W   RKL  ++ +++ V DEAD M+   GF D S+RI
Sbjct: 215 IP--RGTEVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRI 274

Query: 270 MRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPD 329
            R +      CQ+LLFSATF+++V  F  R++  D N + ++KEEL+L +++QY ++C +
Sbjct: 275 QRAL---PSECQMLLFSATFEDSVWQFAERII-PDPNVIKLRKEELTLNNIRQYYVLCEN 334

Query: 330 ELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDK 389
              K + + +    +   +GQ IIF +TR +A  L   ++  G+ V+ + G LT E R  
Sbjct: 335 RKGKYQALCNIYGGIT--IGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRAS 394

Query: 390 IIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYE 449
           II+ F+DG  KVLI+T++ ARG D +QV +V+N+DLP+             +   EP+YE
Sbjct: 395 IIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV-------------NQSEEPDYE 454

Query: 450 VYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEI--MDVRDSDE 497
            YLHRIGR GRFG+KG  FN++  D+  + M KIQ+HF S I  +D  D DE
Sbjct: 455 TYLHRIGRTGRFGKKGLAFNMIEVDKLPLLM-KIQDHFNSNIKQLDPEDMDE 478

[Close]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL
Match: A0A1S4E419 (DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo OX=3656 GN=LOC103501340 PE=4 SV=1)

HSP 1 Score: 844.7 bits (2181), Expect = 2.0e-241
Identity = 446/512 (87.11%), Postives = 461/512 (90.04%), Query Frame = 0


Query: 18  ATSDES-TTATVTVGSSSAP-----PVPKRAWGDEDDD-----------VGEHLESLTI- 77
           +TSD S   A VT  SSSAP     PVPKRAWGDE+DD             E+LESL I 
Sbjct: 9   STSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQ 68

Query: 78  ---NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFH 137
              NLEEP+DS+I+            VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEM+FH
Sbjct: 69  DETNLEEPIDSNITA-----------VTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFH 128

Query: 138 KPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRE 197
           KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTRE
Sbjct: 129 KPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRE 188

Query: 198 LAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRK 257
           LAMQNIEVLKKMGKY GITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRK
Sbjct: 189 LAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRK 248

Query: 258 LGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSR 317
           LGVS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSR
Sbjct: 249 LGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSR 308

Query: 318 VVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN 377
           VV KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN
Sbjct: 309 VV-KDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRN 368

Query: 378 SAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL 437
           SAGMLHKALVDLGY+VTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL
Sbjct: 369 SAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNL 428

Query: 438 VINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQ 497
           VINYDLPLKYE SPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIM 
Sbjct: 429 VINYDLPLKYEPSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIML 488

Query: 498 MDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           MDKIQNHF SEI++VRDSDEDIQAALK AGLV
Sbjct: 489 MDKIQNHFRSEIIEVRDSDEDIQAALKAAGLV 508

[Close]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL
Match: A0A6J1F4Z0 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita moschata OX=3662 GN=LOC111442167 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 8.6e-229
Identity = 423/516 (81.98%), Postives = 450/516 (87.21%), Query Frame = 0


Query: 17  PATSDESTT------ATVTVGSSSAP---PVPKRAWGD-EDDDVG----------EHLES 76
           PA  D +T+      A V V +++ P   PVPKRAWGD EDDDVG          E++ES
Sbjct: 4   PAAPDSTTSNASSAAAAVAVSATTPPVVTPVPKRAWGDEEDDDVGDVGDSSSAPSEYMES 63

Query: 77  LTI----NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVE 136
           L I     LEEP DS+I+            VTTGDTPY+SAS+FEDLNLS E+LKGLYVE
Sbjct: 64  LKIQDEKTLEEPEDSNITA-----------VTTGDTPYSSASTFEDLNLSPEILKGLYVE 123

Query: 137 MRFHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCIC 196
           M+F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCIC
Sbjct: 124 MKFQKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCIC 183

Query: 197 PTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM 256
           PTRELAMQNIEVLKKMGKY GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM
Sbjct: 184 PTRELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWM 243

Query: 257 SSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKN 316
           SSRKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKN
Sbjct: 244 SSRKLGVSCVKILVFDEADHMLSEDGFRDDSLRIMRDIEKSSPHCQVLLFSATFDETVKN 303

Query: 317 FVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFV 376
           FVSRVV KDYNQLFVKKEELSLE VKQYK+ICPDEL KIR+IKDRIFEL +KLGQTIIFV
Sbjct: 304 FVSRVV-KDYNQLFVKKEELSLEGVKQYKVICPDELAKIRIIKDRIFELGEKLGQTIIFV 363

Query: 377 RTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQ 436
           RTRNSA MLHKALVD GYDVTTIQGALTTE RDKIIKEFKDGLTKVLISTDLL+RGFDQQ
Sbjct: 364 RTRNSASMLHKALVDYGYDVTTIQGALTTEDRDKIIKEFKDGLTKVLISTDLLSRGFDQQ 423

Query: 437 QVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDE 496
           QVNLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD 
Sbjct: 424 QVNLVINYDLPLKYESSSEAMKFRSSSQSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDV 483

Query: 497 EIMQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           EIM+MDKIQNHF SE+ +VRDSDEDIQAAL+TAGL+
Sbjct: 484 EIMRMDKIQNHFNSEVTEVRDSDEDIQAALRTAGLL 507

[Close]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL
Match: A0A6J1IXW1 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita maxima OX=3661 GN=LOC111481623 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.5e-228
Identity = 422/514 (82.10%), Postives = 447/514 (86.96%), Query Frame = 0


Query: 17  PATSDESTTATVTVGSSSA-------PPVPKRAWGD-EDDDVG----------EHLESLT 76
           PA  D +T+   +  S+ A        PVPKRAWGD EDDDVG          E++ESL 
Sbjct: 4   PAAPDSTTSNASSAASADAATTPPVVTPVPKRAWGDEEDDDVGDAGDSSSAPSEYMESLK 63

Query: 77  I----NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMR 136
           I     LEEP DS+I+            VTTGDTPY+SAS+FEDLNLS E+LKGLYVEM+
Sbjct: 64  IQDEKTLEEPEDSNITA-----------VTTGDTPYSSASTFEDLNLSPEILKGLYVEMK 123

Query: 137 FHKPSKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPT 196
           F KPSKIQAI+LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPT
Sbjct: 124 FQKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPT 183

Query: 197 RELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS 256
           RELAMQNIEVLKKMGKY GITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS
Sbjct: 184 RELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSS 243

Query: 257 RKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFV 316
           RKLGVS VKILVFDEADHML EDGF+DDSLRIMRDIE+SSPHCQVLLFSATFDE VKNFV
Sbjct: 244 RKLGVSCVKILVFDEADHMLSEDGFRDDSLRIMRDIEKSSPHCQVLLFSATFDETVKNFV 303

Query: 317 SRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRT 376
           SRVV KDYNQLFVKKEELSLE VKQYK+ICPDEL KIRVIKDRIFEL +KLGQTIIFVRT
Sbjct: 304 SRVV-KDYNQLFVKKEELSLEGVKQYKVICPDELAKIRVIKDRIFELGEKLGQTIIFVRT 363

Query: 377 RNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQV 436
           RNSA MLHKALVD GYDVTTIQGALTTE RDKIIKEFKDGLTKVLISTDLL+RGFDQQQV
Sbjct: 364 RNSASMLHKALVDYGYDVTTIQGALTTEHRDKIIKEFKDGLTKVLISTDLLSRGFDQQQV 423

Query: 437 NLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEI 496
           NLVINYDLPLKYESS +A K+RSSS SEPNYEVYLHRIGRAGRFGRKGAVFNLLCGD E+
Sbjct: 424 NLVINYDLPLKYESSSEAMKFRSSSQSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDVEM 483

Query: 497 MQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           M+MDKIQNHF SE+ +VRDSDEDIQAALKTAGL+
Sbjct: 484 MRMDKIQNHFNSEVTEVRDSDEDIQAALKTAGLL 505

[Close]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL
Match: A0A1S3B601 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo OX=3656 GN=LOC103486545 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.3e-228
Identity = 417/510 (81.76%), Postives = 450/510 (88.24%), Query Frame = 0


Query: 19  TSDESTTATVTVGSSSAP----PVPKRAWGDEDDD------------VGEHLESLTI--- 78
           ++  S  AT+T   S+AP    P+PKR+WG+E+DD              E +ESL I   
Sbjct: 12  SNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVMESLKIEDE 71

Query: 79  -NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKP 138
             LEEP+DS+I+            VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEMRFHKP
Sbjct: 72  TTLEEPIDSNITA-----------VTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKP 131

Query: 139 SKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELA 198
           SKIQAI+LPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTRELA
Sbjct: 132 SKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA 191

Query: 199 MQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLG 258
           MQNIEVLKKMGKY GITSECAVPADSANY+P+SKRPPITAQVVIGTPGTIKKWMS RKLG
Sbjct: 192 MQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLG 251

Query: 259 VSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVV 318
           VS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HCQVLLFSATFDENVKNFVSRVV
Sbjct: 252 VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVLLFSATFDENVKNFVSRVV 311

Query: 319 KKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSA 378
            KDYNQLFVKKEELSLESVKQ+KLICP+E TKIRVIKDRIFELADKLGQTIIFV TRNSA
Sbjct: 312 -KDYNQLFVKKEELSLESVKQFKLICPNEQTKIRVIKDRIFELADKLGQTIIFVATRNSA 371

Query: 379 GMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI 438
           G+LHKALVDLGYDVTTIQGA+T +IRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI
Sbjct: 372 GVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVI 431

Query: 439 NYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMD 498
           NYDLPLK++ S QA KYRSSS SEPN+EVYLHRIGRAGRFGRKGAVFNLLCGD+EI +MD
Sbjct: 432 NYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHRIGRAGRFGRKGAVFNLLCGDQEIKRMD 491

Query: 499 KIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           KIQ HFGSE+++VRDSDEDIQAALK+AGL+
Sbjct: 492 KIQKHFGSEVIEVRDSDEDIQAALKSAGLI 509

[Close]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL
Match: A0A5A7TRB4 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002860 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 1.1e-223
Identity = 417/537 (77.65%), Postives = 450/537 (83.80%), Query Frame = 0


Query: 19  TSDESTTATVTVGSSSAP----PVPKRAWGDEDDD------------VGEHLESLTI--- 78
           ++  S  AT+T   S+AP    P+PKR+WG+E+DD              E +ESL I   
Sbjct: 12  SNGSSCDATITHSPSTAPFVVSPMPKRSWGNEEDDDVVADTGGSSSVPSEVMESLKIEDE 71

Query: 79  -NLEEPVDSDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKP 138
             LEEP+DS+I+            VTTGDTPY+SAS+FEDLNLS+ELLKGLYVEMRFHKP
Sbjct: 72  TTLEEPIDSNITA-----------VTTGDTPYSSASTFEDLNLSKELLKGLYVEMRFHKP 131

Query: 139 SKIQAITLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELA 198
           SKIQAI+LPMILTPPYK LIAQAHNGSGKTTCFVLGMLSRVDVNLK PQAFCICPTRELA
Sbjct: 132 SKIQAISLPMILTPPYKHLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELA 191

Query: 199 MQNIEVLKKMGKYAGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLG 258
           MQNIEVLKKMGKY GITSECAVPADSANY+P+SKRPPITAQVVIGTPGTIKKWMS RKLG
Sbjct: 192 MQNIEVLKKMGKYTGITSECAVPADSANYMPVSKRPPITAQVVIGTPGTIKKWMSGRKLG 251

Query: 259 VSSVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHC--------------------- 318
           VS VKILVFDEADHMLGEDGFQDDSLRIMRDIERSS HC                     
Sbjct: 252 VSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSSHCQVCLYYYITISNHSNLIFPFL 311

Query: 319 ------QVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKI 378
                 QVLLFSATFDENVKNFVSRVV KDYNQLFVKKEELSLESVKQ+KLICP+E TKI
Sbjct: 312 IVKNLFQVLLFSATFDENVKNFVSRVV-KDYNQLFVKKEELSLESVKQFKLICPNEQTKI 371

Query: 379 RVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEF 438
           RVIKDRIFELADKLGQTIIFV TRNSAG+LHKALVDLGYDVTTIQGA+T +IRDKIIKEF
Sbjct: 372 RVIKDRIFELADKLGQTIIFVATRNSAGVLHKALVDLGYDVTTIQGAMTNDIRDKIIKEF 431

Query: 439 KDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHR 498
           KDGLTKVLISTDLLARGFDQQQVNLVINYDLPLK++ S QA KYRSSS SEPN+EVYLHR
Sbjct: 432 KDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKHDPSSQAMKYRSSSSSEPNFEVYLHR 491

Query: 499 IGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDIQAALKTAGLV 509
           IGRAGRFGRKGAVFNLLCGD+EI +MDKIQ HFGSE+++VRDSDEDIQAALK+AGL+
Sbjct: 492 IGRAGRFGRKGAVFNLLCGDQEIKRMDKIQKHFGSEVIEVRDSDEDIQAALKSAGLI 536

[Close]

BLAST of CaUC01G008670 vs. TAIR 10
Match: AT3G53110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 564.3 bits (1453), Expect = 9.9e-161
Identity = 304/508 (59.84%), Postives = 389/508 (76.57%), Query Frame = 0


Query: 15  ELPATSDESTTATVTVGSS---SAPPVPKRAWGDEDDDVGE-----HLESLTINLEEPVD 74
           ++P   + S+++TV   +S   + P   K+ WGD +DD  E      L SL+I  EE  D
Sbjct: 7   KVPTVVESSSSSTVEASNSAEKTEPTTEKKKWGDVEDDDDEEEAVSELNSLSIKEEEKPD 66

Query: 75  SDISVTLSFSPSIVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITL 134
           S +        S +  VT+GDTPYTSAS FEDLNLS EL+KGLYVEM+F KPSKIQAI+L
Sbjct: 67  SILEEP---EDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISL 126

Query: 135 PMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLK 194
           PMI+TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+
Sbjct: 127 PMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQ 186

Query: 195 KMGKYAGITSECAVPADSANYVPMSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSSVKIL 254
           KMGK+ GIT+E AVP DS    P + R  P++A VVIGTPGT+KKWM+ ++LG++ +KIL
Sbjct: 187 KMGKFTGITAELAVP-DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKIL 246

Query: 255 VFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQL 314
           VFDEADHML  DGF+DDSL+IM+DI R +P+ QVLLFSATF+E VK+FV+R V KD NQL
Sbjct: 247 VFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTV-KDPNQL 306

Query: 315 FVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKAL 374
           FVK+E+L+L+SVKQYK++CP E  KI VIKD+I EL D +GQTIIFV+T+ SA  +HKAL
Sbjct: 307 FVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGD-IGQTIIFVKTKASAQKVHKAL 366

Query: 375 VDLGYDVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLK 434
            ++GYDVT++ G LT   RDKI+KEFK+ LT+VLI+TD++ARGFDQQ+VNLV+NY+LP K
Sbjct: 367 AEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTK 426

Query: 435 YESSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCG---DEEIMQMDKIQN 494
           YE+             EP+YEVYLHR+GRAGRFGRKGAVFNLL     D+E+  M+KI+ 
Sbjct: 427 YET------------GEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEV--MEKIEK 486

Query: 495 HFGSEIMDVR--DSDEDIQAALKTAGLV 509
           +F + + +++  +S+E+ ++ALK AGL+
Sbjct: 487 YFEANVKEIKSWNSEEEYKSALKEAGLL 494

[Close]

BLAST of CaUC01G008670 vs. TAIR 10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III )

HSP 1 Score: 213.0 bits (541), Expect = 5.6e-55
Identity = 141/412 (34.22%), Postives = 221/412 (53.64%), Query Frame = 0


Query: 79  IVFEVTTGDTPYTSASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLI 138
           +VFE T G  P T   SF D+ + +++L+G+Y E  F KPS IQ   +  IL    +D+I
Sbjct: 23  LVFETTDGIEPIT---SFNDMGIKEDVLRGVY-EYGFEKPSAIQQRAVMPILQG--RDVI 82

Query: 139 AQAHNGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSEC 198
           AQA +G+GKT+   L +   VD + +  QA  + PTRELA Q  + ++ +G +A I +  
Sbjct: 83  AQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHA 142

Query: 199 AVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDG 258
            +  +S       ++      VV GTPG +   +  R L   ++K+L+ DE+D ML   G
Sbjct: 143 CIGGNSVG--EDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSR-G 202

Query: 259 FQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVK 318
           F+D    + R +    P  QV L SAT    +    S+ + +   ++ VK++EL+LE +K
Sbjct: 203 FKDQIYDVYRYL---PPDLQVCLVSATLPHEILEMTSKFMTEPV-KILVKRDELTLEGIK 262

Query: 319 QYKLICPDELTKIRVIKDRIFELADKL--GQTIIFVRTRNSAGMLHKALVDLGYDVTTIQ 378
           Q+ +    E  K     D + +L D L   Q +IF  T+     L + +    + V+++ 
Sbjct: 263 QFFVAVEKEEWKF----DTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMH 322

Query: 379 GALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYR 438
           G +  + RD I+ EF+ G ++VLI+TD+ ARG D QQV+LVINYDLP             
Sbjct: 323 GDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLP------------- 382

Query: 439 SSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEI 489
                  N E+Y+HRIGR+GRFGRKG   N +  D +I  +  I+ ++ ++I
Sbjct: 383 ------NNRELYIHRIGRSGRFGRKGVAINFVKSD-DIKILRDIEQYYSTQI 397

[Close]

BLAST of CaUC01G008670 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-53
Identity = 142/406 (34.98%), Postives = 212/406 (52.22%), Query Frame = 0


Query: 95  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFV 154
           SF+ + L + LL+G+Y    F KPS IQ       + P  K  D+I QA +G+GKT  F 
Sbjct: 40  SFDAMGLQENLLRGIYA-YGFEKPSAIQ----QRGIVPFCKGLDVIQQAQSGTGKTATFC 99

Query: 155 LGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSK 214
            G+L ++D +L   QA  + PTRELA Q  +V++ +G Y G+     V   S        
Sbjct: 100 SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 159

Query: 215 RPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIER 274
           +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D    I + +  
Sbjct: 160 QAGV--HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR-GFKDQIYDIFQLL-- 219

Query: 275 SSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIR 334
             P  QV +FSAT          + + K   ++ VK++EL+LE +KQ+ +    E  K+ 
Sbjct: 220 -PPKIQVGVFSATMPPEALEITRKFMSKPV-RILVKRDELTLEGIKQFYVNVEKEEWKLE 279

Query: 335 VIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFK 394
            + D    LA  + Q++IFV TR     L   +    + V+   G +    RD I++EF+
Sbjct: 280 TLCDLYETLA--ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 339

Query: 395 DGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRI 454
            G ++VLI+TDLLARG D QQV+LVIN+DLP + E+                   YLHRI
Sbjct: 340 SGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN-------------------YLHRI 399

Query: 455 GRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDI 499
           GR+GRFGRKG   N +  D+E M  D IQ  +   + ++  +  D+
Sbjct: 400 GRSGRFGRKGVAINFVTRDDERMLFD-IQKFYNVVVEELPSNVADL 411

[Close]

BLAST of CaUC01G008670 vs. TAIR 10
Match: AT3G13920.3 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-53
Identity = 142/406 (34.98%), Postives = 212/406 (52.22%), Query Frame = 0


Query: 95  SFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYK--DLIAQAHNGSGKTTCFV 154
           SF+ + L + LL+G+Y    F KPS IQ       + P  K  D+I QA +G+GKT  F 
Sbjct: 30  SFDAMGLQENLLRGIYA-YGFEKPSAIQ----QRGIVPFCKGLDVIQQAQSGTGKTATFC 89

Query: 155 LGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPADSANYVPMSK 214
            G+L ++D +L   QA  + PTRELA Q  +V++ +G Y G+     V   S        
Sbjct: 90  SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 149

Query: 215 RPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDDSLRIMRDIER 274
           +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D    I + +  
Sbjct: 150 QAGV--HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR-GFKDQIYDIFQLL-- 209

Query: 275 SSPHCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYKLICPDELTKIR 334
             P  QV +FSAT          + + K   ++ VK++EL+LE +KQ+ +    E  K+ 
Sbjct: 210 -PPKIQVGVFSATMPPEALEITRKFMSKPV-RILVKRDELTLEGIKQFYVNVEKEEWKLE 269

Query: 335 VIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTTEIRDKIIKEFK 394
            + D    LA  + Q++IFV TR     L   +    + V+   G +    RD I++EF+
Sbjct: 270 TLCDLYETLA--ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 329

Query: 395 DGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLSEPNYEVYLHRI 454
            G ++VLI+TDLLARG D QQV+LVIN+DLP + E+                   YLHRI
Sbjct: 330 SGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN-------------------YLHRI 389

Query: 455 GRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDI 499
           GR+GRFGRKG   N +  D+E M  D IQ  +   + ++  +  D+
Sbjct: 390 GRSGRFGRKGVAINFVTRDDERMLFD-IQKFYNVVVEELPSNVADL 401

[Close]

BLAST of CaUC01G008670 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 207.2 bits (526), Expect = 3.1e-53
Identity = 144/417 (34.53%), Postives = 220/417 (52.76%), Query Frame = 0


Query: 87  DTPYTS----ASSFEDLNLSQELLKGLYVEMRFHKPSKIQAITLPMILTPPYKDLIAQAH 146
           +T YT+      SF+ + L  +LL+G+Y    F KPS IQ     +I      D+I QA 
Sbjct: 30  ETFYTNYDEVCDSFDAMELQPDLLRGIYA-YGFEKPSAIQ--QRGIIPFCKGLDVIQQAQ 89

Query: 147 NGSGKTTCFVLGMLSRVDVNLKTPQAFCICPTRELAMQNIEVLKKMGKYAGITSECAVPA 206
           +G+GKT  F  G+L ++D++L   QA  + PTRELA Q  +V++ +G Y G+ ++  V  
Sbjct: 90  SGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGG 149

Query: 207 DSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSSVKILVFDEADHMLGEDGFQDD 266
            S        +  +   VV+GTPG +   +  + L   ++K+ V DEAD ML   GF+D 
Sbjct: 150 TSVREDQRVLQSGV--HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSR-GFKDQ 209

Query: 267 SLRIMRDIERSSP-HCQVLLFSATFDENVKNFVSRVVKKDYNQLFVKKEELSLESVKQYK 326
               + DI +  P   QV +FSAT          + + K   ++ VK++EL+LE +KQ+ 
Sbjct: 210 ----IYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV-RILVKRDELTLEGIKQFY 269

Query: 327 LICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYDVTTIQGALTT 386
           +    E  K+  + D    LA  + Q++IFV TR     L   +    + V+   G +  
Sbjct: 270 VNVDKEEWKLETLCDLYETLA--ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 329

Query: 387 EIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYESSPQATKYRSSSLS 446
             RD I++EF+ G ++VLI+TDLLARG D QQV+LVIN+DLP + E+             
Sbjct: 330 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN------------- 389

Query: 447 EPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMQMDKIQNHFGSEIMDVRDSDEDI 499
                 YLHRIGR+GRFGRKG   N +  ++E M  D IQ  +   + ++  +  D+
Sbjct: 390 ------YLHRIGRSGRFGRKGVAINFMTSEDERMMAD-IQRFYNVVVEELPSNVADL 413

The following BLAST results are available for this feature:

BLAST of CaUC01G008670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876100.1	1.3e-244	88.30	DEAD-box ATP-dependent RNA helicase 38-like [Benincasa hispida]	[more]
XP_008463114.1	4.1e-241	87.11	PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo] >XP_016902...	[more]
XP_004150128.2	2.6e-240	86.47	DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8648330.1 hypotheti...	[more]
XP_038906287.1	4.2e-238	84.38	DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-...	[more]
XP_022935217.1	1.8e-228	81.98	DEAD-box ATP-dependent RNA helicase 38 [Cucurbita moschata] >KAG7017403.1 DEAD-b...	[more]

BLAST of CaUC01G008670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZG7	1.4e-159	59.84	DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 P...	[more]
Q10RI7	4.5e-150	64.49	DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9UHL0	1.7e-80	41.85	ATP-dependent RNA helicase DDX25 OS=Homo sapiens OX=9606 GN=DDX25 PE=1 SV=2	[more]
Q2TBP1	2.9e-80	40.83	ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1	[more]
Q9QY15	1.1e-79	39.62	ATP-dependent RNA helicase DDX25 OS=Mus musculus OX=10090 GN=Ddx25 PE=1 SV=2	[more]

BLAST of CaUC01G008670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E419	2.0e-241	87.11	DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo OX=3656 GN=LOC103501...	[more]
A0A6J1F4Z0	8.6e-229	81.98	DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IXW1	1.5e-228	82.10	DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita maxima OX=3661 GN=LOC1114816...	[more]
A0A1S3B601	4.3e-228	81.76	DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo OX=3656 GN=LOC103486545 P...	[more]
A0A5A7TRB4	1.1e-223	77.65	DEAD-box ATP-dependent RNA helicase 38 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CaUC01G008670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53110.1	9.9e-161	59.84	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G19760.1	5.6e-55	34.22	eukaryotic initiation factor 4A-III	[more]
AT3G13920.1	1.8e-53	34.98	eukaryotic translation initiation factor 4A1	[more]
AT3G13920.3	1.8e-53	34.98	eukaryotic translation initiation factor 4A1	[more]
AT1G72730.1	3.1e-53	34.53	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 114..320 e-value: 3.0E-36 score: 136.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 128..304 score: 23.599449
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 359..459 e-value: 4.3E-24 score: 96.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 331..459 e-value: 7.9E-24 score: 84.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..499 score: 19.671024
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 120..292 e-value: 1.3E-35 score: 122.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 79..311 e-value: 2.9E-55 score: 188.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 312..499 e-value: 8.3E-41 score: 141.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 166..478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..34
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 82..490
None	No IPR available	PANTHER	PTHR47958:SF31	DEAD-BOX HELICASE DBP80	coord: 82..490
None	No IPR available	CDD	cd17963	DEADc_DDX19_DDX25	coord: 101..300 e-value: 1.33258E-97 score: 291.401
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 317..468 e-value: 3.58996E-40 score: 139.565
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 94..123 score: 9.60951

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G008670.1	CaUC01G008670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0010494	cytoplasmic stress granule
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding