CaUC01G008590 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G008590
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr01: 9776817 .. 9778724 (-)
RNA-Seq ExpressionCaUC01G008590
SyntenyCaUC01G008590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTCTGTTTCTCTTTACTCACCCACAAACAATTGCTTCTTCAGATCCCCAAAATCCATCTCCTACTACTTCCAAATCCCCTCATCTCCTCTCCAAACCCACTGTATCACCCCATTTTCCCCCCAAAAATTCAACTACAGGGCTCTCCTTTCAACAACGGCATCGGACTTTCCTTCAGAATTACAAGACAGGTAATTTTACCGCATCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCAAATCCTACCCCTGCCATGTCTTCATTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTCTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCCAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTTTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTAAGGAAATGAAAGCTCGGAGAATACTTCCAGATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATACAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGTTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGGTATCATTCAAGCTCATGGTCCAGTGCCAAGTTCAGATACGTTTAGTATCTTTCTTGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTATGATTTGAAATTGAACATTGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAACTGTTGTGACGCATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACTTACAATACACTTCTACAAGGTTTCTACAAAAGTAAAAAACGAGAGGAAATGGTTGAGCTTCTGCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCACAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

mRNA sequence

ATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTCTGTTTCTCTTTACTCACCCACAAACAATTGCTTCTTCAGATCCCCAAAATCCATCTCCTACTACTTCCAAATCCCCTCATCTCCTCTCCAAACCCACTGTATCACCCCATTTTCCCCCCAAAAATTCAACTACAGGGCTCTCCTTTCAACAACGGCATCGGACTTTCCTTCAGAATTACAAGACAGGTAATTTTACCGCATCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCAAATCCTACCCCTGCCATGTCTTCATTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTCTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCCAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTTTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTAAGGAAATGAAAGCTCGGAGAATACTTCCAGATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATACAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGTTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGGTATCATTCAAGCTCATGGTCCAGTGCCAAGTTCAGATACGTTTAGTATCTTTCTTGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTATGATTTGAAATTGAACATTGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAACTGTTGTGACGCATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACTTACAATACACTTCTACAAGGTTTCTACAAAAGTAAAAAACGAGAGGAAATGGTTGAGCTTCTGCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCACAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

Coding sequence (CDS)

ATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTCTGTTTCTCTTTACTCACCCACAAACAATTGCTTCTTCAGATCCCCAAAATCCATCTCCTACTACTTCCAAATCCCCTCATCTCCTCTCCAAACCCACTGTATCACCCCATTTTCCCCCCAAAAATTCAACTACAGGGCTCTCCTTTCAACAACGGCATCGGACTTTCCTTCAGAATTACAAGACAGGTAATTTTACCGCATCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCAAATCCTACCCCTGCCATGTCTTCATTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTCTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCCAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTTTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTAAGGAAATGAAAGCTCGGAGAATACTTCCAGATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATACAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGTTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGGTATCATTCAAGCTCATGGTCCAGTGCCAAGTTCAGATACGTTTAGTATCTTTCTTGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTATGATTTGAAATTGAACATTGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAACTGTTGTGACGCATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACTTACAATACACTTCTACAAGGTTTCTACAAAAGTAAAAAACGAGAGGAAATGGTTGAGCTTCTGCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCACAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

Protein sequence

MVSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKPTVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYMLEDEKYREFLNLLPTFPTQECQG
Homology
BLAST of CaUC01G008590 vs. NCBI nr
Match: XP_038874245.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874246.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874247.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1038.9 bits (2685), Expect = 1.8e-299
Identity = 518/643 (80.56%), Postives = 575/643 (89.42%), Query Frame = 0

Query: 1   MVSKTVSSA----LSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLS---KP 60
           MVSKTV+SA    LSP PSK KLSS  LFTHPQ +ASS+PQNP P  +KSP +LS   K 
Sbjct: 1   MVSKTVASAIFPSLSPAPSKGKLSS--LFTHPQRVASSNPQNPFPIPAKSPPVLSKLFKS 60

Query: 61  TVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLV 120
           TVSP   P+ ST+ +SFQ+R RTFL N KTGNFTASE LQFFDL M+ANPTPAM+SFNL+
Sbjct: 61  TVSPEISPEKSTSEISFQERLRTFLHNCKTGNFTASEGLQFFDLMMSANPTPAMASFNLL 120

Query: 121 LSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 180
           L GLAKIKHYSEVFQ+YYR+SLAGLLPN IT N+L+NCLCNVNRVSEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKIKHYSEVFQVYYRMSLAGLLPNYITFNILLNCLCNVNRVSEGLAAMAGIIRRGY 180

Query: 181 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALK 240
           TPN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALK
Sbjct: 181 TPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 241 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTS 300
           LHEEMLNGTG YGINCKPNVICY+TIIDGLCKDGQEDKA +LF+EMKA+R+LPDVVSY+S
Sbjct: 241 LHEEMLNGTGHYGINCKPNVICYSTIIDGLCKDGQEDKARKLFEEMKAQRMLPDVVSYSS 300

Query: 301 LIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQS 360
           LIHGF  SG+WEEAKCLLNEMVDQG+QPN  TFNVLM MLCKVGQVI AK+LLEV MIQ 
Sbjct: 301 LIHGFCHSGRWEEAKCLLNEMVDQGIQPNAVTFNVLMGMLCKVGQVIEAKKLLEV-MIQR 360

Query: 361 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEA 420
           G +P LF YNTL+DGFCLVGDL+SARELFDS+PSKGCEPN++SY VLINGYCKN K+EEA
Sbjct: 361 GNIPDLFTYNTLMDGFCLVGDLHSARELFDSIPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 421 MKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDG 480
           MKIYNEMLQMGIKP VITYNALL GLFQARKV+DAKKIFG+IQA G VPSS TFSIFLDG
Sbjct: 421 MKIYNEMLQMGIKPSVITYNALLMGLFQARKVNDAKKIFGVIQARGLVPSSCTFSIFLDG 480

Query: 481 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 540
           LCKNDCLLEAME +NELSY+LKLNI IFNC+I+GLCKA K+ETAWELF+K SH+GLLP V
Sbjct: 481 LCKNDCLLEAMEFYNELSYNLKLNIDIFNCLINGLCKARKLETAWELFDKFSHEGLLPNV 540

Query: 541 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 600
           VT++I+I+G CKEGQLEKANDLF+KMEENGCTP+VITYNTLL GFY S KREE++ELLH+
Sbjct: 541 VTYSILIHGCCKEGQLEKANDLFRKMEENGCTPNVITYNTLLCGFYGSNKREEVIELLHR 600

Query: 601 MVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           MVQKNVLP+  TC+ V+ ML EDEK+R +LNLLPTFP QEC+G
Sbjct: 601 MVQKNVLPDASTCTIVVNMLSEDEKFRGYLNLLPTFPIQECRG 640

BLAST of CaUC01G008590 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 1010.7 bits (2612), Expect = 5.4e-291
Identity = 505/643 (78.54%), Postives = 564/643 (87.71%), Query Frame = 0

Query: 1   MVSKTVSSALS----PPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP--- 60
           MVSKTV+SA+S    P PSK KLSS  LFTHP  IASS PQNPSP +++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSS--LFTHPTIIASSKPQNPSPISAESPPVISKPPNS 60

Query: 61  TVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLV 120
            VSP    + STT +SF +R RTFLQN KTGNFT SEALQFFDL M ANPTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLL 120

Query: 121 LSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 180
           L GLAK KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGY 180

Query: 181 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALK 240
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALK
Sbjct: 181 VPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 241 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTS 300
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 301 LIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQS 360
           LIHGF   GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A +LLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEV-MIQR 360

Query: 361 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEA 420
           G VP LF YNTL+DGFCLV DL SARELF S+PSKGCEPN++SY VLINGYCKN K+EEA
Sbjct: 361 GNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 421 MKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDG 480
           MKIYNEMLQ+G+KP VITYNALLTGLFQA KVDDAKKIFG+IQAHG VPSS T SIF+DG
Sbjct: 421 MKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 481 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 540
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +G LP V
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNV 540

Query: 541 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 600
           VT++I+I+G CKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 601 MVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           MV KNV+P+  TC+ VL ML EDEKYR  LNLLPTFP Q+ +G
Sbjct: 601 MVNKNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

BLAST of CaUC01G008590 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1006.9 bits (2602), Expect = 7.7e-290
Identity = 505/643 (78.54%), Postives = 564/643 (87.71%), Query Frame = 0

Query: 1   MVSKTV----SSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP--- 60
           MVSKTV    SS+LSP PSK KLSS  L T P  IASS+PQN SP  ++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSS--LVTRPLRIASSNPQNLSPIPAESPPIISKPPNS 60

Query: 61  TVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLV 120
            VSP    + STT +SF +R RTFLQN KTGNFTASEA QFFDL M ANPTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTASEAFQFFDLMMLANPTPAMSSFNLL 120

Query: 121 LSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 180
           L GLAK KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGF 180

Query: 181 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALK 240
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALK
Sbjct: 181 IPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 241 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTS 300
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 301 LIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQS 360
           LIHGF   GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A ELLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQR 360

Query: 361 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEA 420
           G  P LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN K+EEA
Sbjct: 361 GNAPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 421 MKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDG 480
           MKIYNEMLQ+GIKP VITYNALLTGLFQA KVDDAKKIFG+IQAHG VPSS T SIF+DG
Sbjct: 421 MKIYNEMLQVGIKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 481 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 540
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLP V
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNV 540

Query: 541 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 600
           VT++I+I+GYCKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+
Sbjct: 541 VTYSILIHGYCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 601 MVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           MV+KNV+P+  TC+ VL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 601 MVKKNVVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

BLAST of CaUC01G008590 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1001.9 bits (2589), Expect = 2.5e-288
Identity = 499/638 (78.21%), Postives = 561/638 (87.93%), Query Frame = 0

Query: 2   VSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP---TVSPH 61
           V+  +SS+LSP PSK KLSS  LFT P  IASS+PQNPSP  ++SP ++SKP    VSP 
Sbjct: 6   VASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPE 65

Query: 62  FPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLA 121
              + STT +SF  R RTFLQN KTGNFT SEALQFFDL M ANPTPAMSSFNL+L GLA
Sbjct: 66  VSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLA 125

Query: 122 KIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTV 181
           K KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+ PN V
Sbjct: 126 KTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIV 185

Query: 182 TYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEM 241
           TYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALKLHEEM
Sbjct: 186 TYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEM 245

Query: 242 LNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGF 301
           LNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+SLIHGF
Sbjct: 246 LNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGF 305

Query: 302 GRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPS 361
              GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A ELLEV MIQ G VP 
Sbjct: 306 CNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQRGNVPD 365

Query: 362 LFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYN 421
           LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN K+EEAMKIYN
Sbjct: 366 LFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYN 425

Query: 422 EMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKND 481
           EMLQ+GIKP +ITYNALLTGLFQA KV+DAKKIFG+IQAHG VPSS T SIF+DGLCKND
Sbjct: 426 EMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKND 485

Query: 482 CLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNI 541
           CLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLP VVT++I
Sbjct: 486 CLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSI 545

Query: 542 MIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKN 601
           +I+G CKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+MV+KN
Sbjct: 546 LIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKN 605

Query: 602 VLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           V+P+  TC+ VL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 606 VVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

BLAST of CaUC01G008590 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1000.3 bits (2585), Expect = 7.2e-288
Identity = 502/643 (78.07%), Postives = 562/643 (87.40%), Query Frame = 0

Query: 1   MVSKTV----SSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP--- 60
           MVSKTV    SS+LSP PSK KLSS  LFT P  IASS+PQNPSP  ++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNS 60

Query: 61  TVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLV 120
            VSP    + STT + F +R RTFLQN KTGNFT SEA QFFDL M ANPTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLL 120

Query: 121 LSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 180
           L GLAK KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGF 180

Query: 181 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALK 240
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALK
Sbjct: 181 IPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 241 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTS 300
           LHEEMLNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 301 LIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQS 360
           LIHGF   GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A ELLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQR 360

Query: 361 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEA 420
           G VP LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN K+EEA
Sbjct: 361 GNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 421 MKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDG 480
           MKIYNEMLQ+GIKP VITYNALLTGLFQA KV+DAKKIFG+IQAHG VPSS T SIF+DG
Sbjct: 421 MKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 481 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 540
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLP V
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNV 540

Query: 541 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 600
           VT++I+I+G CKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 601 MVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           MV+KNV+P+  TC+ VL ML +DEKYR  LNLLP FP QE +G
Sbjct: 601 MVKKNVVPDASTCTIVLDMLSKDEKYRGCLNLLPMFPVQEYRG 640

BLAST of CaUC01G008590 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-111
Identity = 221/613 (36.05%), Postives = 347/613 (56.61%), Query Frame = 0

Query: 44  SKSPHLLSKPTVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANP 103
           S    +L K T   H+    +   LS+++R R  + + K      ++A+  F+  + + P
Sbjct: 13  SNFTQILEKGTSLLHY-SSITEAKLSYKERLRNGIVDIK-----VNDAIDLFESMIQSRP 72

Query: 104 TPAMSSFNLVLSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLA 163
            P    FN + S +A+ K Y  V      + L G+  ++ T+ +++NC C   ++    +
Sbjct: 73  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 132

Query: 164 AMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLC 223
            +    + GY P+T+T+++L+ G C+E R+ EA  L  RM ++  RPD++T  TLI GLC
Sbjct: 133 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 192

Query: 224 QTGNTNIALKLHEEML--------------------NGTGRYGI---------NCKPNVI 283
             G  + AL L + M+                    +G     +         N K +V+
Sbjct: 193 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 252

Query: 284 CYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEM 343
            Y+ +ID LCKDG  D A+ LF EM+ + I  DVV+Y+SLI G    GKW++   +L EM
Sbjct: 253 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 312

Query: 344 VDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGD 403
           + + + P+  TF+ L+D+  K G+++ AKEL    MI  GI P    YN+L+DGFC    
Sbjct: 313 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENC 372

Query: 404 LNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNA 463
           L+ A ++FD + SKGCEP++V+Y++LIN YCK  ++++ M+++ E+   G+ P  ITYN 
Sbjct: 373 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 432

Query: 464 LLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD- 523
           L+ G  Q+ K++ AK++F  + + G  PS  T+ I LDGLC N  L +A+EIF ++    
Sbjct: 433 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 492

Query: 524 LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKAN 583
           + L IGI+N II G+C A KV+ AW LF  LS KG+ P VVT+N+MI G CK+G L +A+
Sbjct: 493 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 552

Query: 584 DLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYML 626
            LF+KM+E+GCTPD  TYN L++           VEL+ +M       ++ T   V+ ML
Sbjct: 553 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 612

BLAST of CaUC01G008590 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 6.3e-109
Identity = 203/564 (35.99%), Postives = 333/564 (59.04%), Query Frame = 0

Query: 64  STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHY 123
           S   + F++R R+ + + K       +A+  F   + + P P++  F+   S +A+ K +
Sbjct: 50  SNGNVCFRERLRSGIVDIK-----KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 109

Query: 124 SEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 183
           + V     ++ L G+  N+ TLN+++NC C   +     + +  +++ GY P+T T+ +L
Sbjct: 110 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 169

Query: 184 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTG 243
           IKGL +E ++ EA  L  RM + GC+PDV+TY +++ G+C++G+T++AL L  +M     
Sbjct: 170 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-- 229

Query: 244 RYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGK 303
               N K +V  Y+TIID LC+DG  D A+ LFKEM+ + I   VV+Y SL+ G  ++GK
Sbjct: 230 ----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 289

Query: 304 WEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYN 363
           W +   LL +MV + + PN  TFNVL+D+  K G++  A EL +  MI  GI P++  YN
Sbjct: 290 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYN 349

Query: 364 TLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQM 423
           TL+DG+C+   L+ A  + D +    C P++V++T LI GYC   ++++ MK++  + + 
Sbjct: 350 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 409

Query: 424 GIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEA 483
           G+    +TY+ L+ G  Q+ K+  A+++F  + +HG +P   T+ I LDGLC N  L +A
Sbjct: 410 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 469

Query: 484 MEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYG 543
           +EIF +L    + L I ++  II+G+CK GKVE AW LF  L  KG+ P V+T+ +MI G
Sbjct: 470 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 529

Query: 544 YCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPN 603
            CK+G L +AN L +KMEE+G  P+  TYNTL++   +        +L+ +M       +
Sbjct: 530 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 589

Query: 604 TYTCSTVLYM-LEDEKYREFLNLL 626
             +   V+ M L  E  + FL++L
Sbjct: 590 ASSIKMVIDMLLSGELDKSFLDML 601

BLAST of CaUC01G008590 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.8e-108
Identity = 216/599 (36.06%), Postives = 343/599 (57.26%), Query Frame = 0

Query: 64  STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHY 123
           S   LS+++R R+ L + K     A +A+  F   +++ P P +  F+ + S +AK K Y
Sbjct: 50  SDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 109

Query: 124 SEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 183
             V  L  ++ L G+  NL TL++++NC C   ++    +AM  II+ GY PNT+T+++L
Sbjct: 110 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 169

Query: 184 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTG 243
           I GLC+E R+ EA  L  RM ++G +PD+IT  TL+ GLC +G    A+ L ++M+    
Sbjct: 170 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---- 229

Query: 244 RYGINCKP---------NVIC--------------------------YNTIIDGLCKDGQ 303
            YG  C+P         NV+C                          Y+ IIDGLCK G 
Sbjct: 230 EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 289

Query: 304 EDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNV 363
            D A  LF EM+ + I  ++++Y  LI GF  +G+W++   LL +M+ + + PN  TF+V
Sbjct: 290 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 349

Query: 364 LMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSK 423
           L+D   K G++  A+E L   MI  GI P    Y +L+DGFC    L+ A ++ D + SK
Sbjct: 350 LIDSFVKEGKLREAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 409

Query: 424 GCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDA 483
           GC+PN+ ++ +LINGYCK  ++++ ++++ +M   G+    +TYN L+ G  +  K++ A
Sbjct: 410 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 469

Query: 484 KKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDG 543
           K++F  + +    P+  T+ I LDGLC N    +A+EIF ++    ++L+IGI+N II G
Sbjct: 470 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 529

Query: 544 LCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPD 603
           +C A KV+ AW+LF  L  KG+ P V T+NIMI G CK+G L +A  LF+KMEE+G  PD
Sbjct: 530 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 589

Query: 604 VITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYMLEDEKYRE-FLNLL 626
             TYN L++         + V+L+ ++ +     +  T   V+ ML D + ++ FL++L
Sbjct: 590 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

BLAST of CaUC01G008590 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.4e-107
Identity = 212/589 (35.99%), Postives = 344/589 (58.40%), Query Frame = 0

Query: 74  HRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQL---- 133
           +R  L+N  +      +A+  F   + + P P++  FN +LS +AK+  +  V  L    
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 134 ---------------------YYRISLA----------GLLPNLITLNVLVNCLCNVNRV 193
                                  ++SLA          G  P+++TL+ L+N  C+  R+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 194 SEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTL 253
           S+ +A +  ++  GY P+T T+T+LI GL + ++  EA  L  +M + GC+PD++TYGT+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 254 IKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKE 313
           + GLC+ G+ ++AL L ++M  G        + +V+ YNTIIDGLCK    D A+ LF E
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNLFTE 289

Query: 314 MKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQ 373
           M  + I PDV +Y+SLI      G+W +A  LL++M+++ + PN  TF+ L+D   K G+
Sbjct: 290 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 349

Query: 374 VINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYT 433
           ++ A++L +  MI+  I P +F Y++L++GFC+   L+ A+ +F+ + SK C PN+V+Y+
Sbjct: 350 LVEAEKLYD-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 409

Query: 434 VLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAH 493
            LI G+CK  ++EE M+++ EM Q G+    +TY  L+ G FQAR  D+A+ +F  + + 
Sbjct: 410 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 469

Query: 494 GPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETA 553
           G  P+  T++I LDGLCKN  L +AM +F  L    ++ +I  +N +I+G+CKAGKVE  
Sbjct: 470 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 529

Query: 554 WELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQG 613
           WELF  LS KG+ P V+ +N MI G+C++G  E+A+ L +KM+E+G  P+  TYNTL++ 
Sbjct: 530 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 589

Query: 614 FYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYMLEDEKY-REFLNLL 626
             +   RE   EL+ +M       +  T   V  ML D +  + FL++L
Sbjct: 590 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

BLAST of CaUC01G008590 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 386.7 bits (992), Expect = 5.0e-106
Identity = 209/573 (36.47%), Postives = 335/573 (58.46%), Query Frame = 0

Query: 90  EALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQL------------YYRISL-- 149
           +A+  F   + + P P++  F+ +LS +AK+  +  V  L            +Y  S+  
Sbjct: 64  DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123

Query: 150 ---------------------AGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYT 209
                                 G  PN++TL+ L+N  C+  R+SE +A +  +   GY 
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183

Query: 210 PNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKL 269
           PNTVT+ +LI GL + ++  EA  L  RM   GC+PD++TYG ++ GLC+ G+T++A  L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243

Query: 270 HEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSL 329
             +M  G        +P V+ YNTIIDGLCK    D A+ LFKEM+ + I P+VV+Y+SL
Sbjct: 244 LNKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 303

Query: 330 IHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSG 389
           I      G+W +A  LL++M+++ + P+  TF+ L+D   K G+++ A++L +  M++  
Sbjct: 304 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD-EMVKRS 363

Query: 390 IVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAM 449
           I PS+  Y++L++GFC+   L+ A+++F+ + SK C P++V+Y  LI G+CK  ++EE M
Sbjct: 364 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 423

Query: 450 KIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGL 509
           +++ EM Q G+    +TYN L+ GLFQA   D A++IF  + + G  P+  T++  LDGL
Sbjct: 424 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 483

Query: 510 CKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 569
           CKN  L +AM +F  L    ++  I  +N +I+G+CKAGKVE  W+LF  LS KG+ P V
Sbjct: 484 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 543

Query: 570 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 626
           V +N MI G+C++G  E+A+ LF++M+E+G  P+   YNTL++   +   RE   EL+ +
Sbjct: 544 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 603

BLAST of CaUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 2.6e-291
Identity = 505/643 (78.54%), Postives = 564/643 (87.71%), Query Frame = 0

Query: 1   MVSKTVSSALS----PPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP--- 60
           MVSKTV+SA+S    P PSK KLSS  LFTHP  IASS PQNPSP +++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSS--LFTHPTIIASSKPQNPSPISAESPPVISKPPNS 60

Query: 61  TVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLV 120
            VSP    + STT +SF +R RTFLQN KTGNFT SEALQFFDL M ANPTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLL 120

Query: 121 LSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 180
           L GLAK KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGY 180

Query: 181 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALK 240
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALK
Sbjct: 181 VPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 241 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTS 300
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 301 LIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQS 360
           LIHGF   GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A +LLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEV-MIQR 360

Query: 361 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEA 420
           G VP LF YNTL+DGFCLV DL SARELF S+PSKGCEPN++SY VLINGYCKN K+EEA
Sbjct: 361 GNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 421 MKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDG 480
           MKIYNEMLQ+G+KP VITYNALLTGLFQA KVDDAKKIFG+IQAHG VPSS T SIF+DG
Sbjct: 421 MKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 481 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 540
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +G LP V
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNV 540

Query: 541 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 600
           VT++I+I+G CKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 601 MVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           MV KNV+P+  TC+ VL ML EDEKYR  LNLLPTFP Q+ +G
Sbjct: 601 MVNKNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

BLAST of CaUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 1.2e-288
Identity = 499/638 (78.21%), Postives = 561/638 (87.93%), Query Frame = 0

Query: 2   VSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLSKP---TVSPH 61
           V+  +SS+LSP PSK KLSS  LFT P  IASS+PQNPSP  ++SP ++SKP    VSP 
Sbjct: 6   VASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPE 65

Query: 62  FPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLA 121
              + STT +SF  R RTFLQN KTGNFT SEALQFFDL M ANPTPAMSSFNL+L GLA
Sbjct: 66  VSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLA 125

Query: 122 KIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTV 181
           K KHYSEV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+ PN V
Sbjct: 126 KTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIV 185

Query: 182 TYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEM 241
           TYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLIKGLCQTGNTNIALKLHEEM
Sbjct: 186 TYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEM 245

Query: 242 LNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGF 301
           LNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELF+EMKARR+LPDV+SY+SLIHGF
Sbjct: 246 LNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGF 305

Query: 302 GRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPS 361
              GKWEEAKCL NEMVD G+QPN  TFNVLMD+LCK G+VI A ELLEV MIQ G VP 
Sbjct: 306 CNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQRGNVPD 365

Query: 362 LFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYN 421
           LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN K+EEAMKIYN
Sbjct: 366 LFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYN 425

Query: 422 EMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKND 481
           EMLQ+GIKP +ITYNALLTGLFQA KV+DAKKIFG+IQAHG VPSS T SIF+DGLCKND
Sbjct: 426 EMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKND 485

Query: 482 CLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNI 541
           CLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLP VVT++I
Sbjct: 486 CLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSI 545

Query: 542 MIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKN 601
           +I+G CKEGQ+EKANDLF+KMEENGCTP+VITYNTLL+GFYKS KREE+VELLH+MV+KN
Sbjct: 546 LIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKN 605

Query: 602 VLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           V+P+  TC+ VL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 606 VVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

BLAST of CaUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 956.8 bits (2472), Expect = 4.4e-275
Identity = 482/646 (74.61%), Postives = 547/646 (84.67%), Query Frame = 0

Query: 1   MVSKTVSSA------LSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPTTSKSPHLLS--- 60
           MVSK+V+SA       S  P+K KLSS  LFT    I SS+PQ    ++SK P LLS   
Sbjct: 1   MVSKSVASASSVVAVSSSAPAKGKLSS--LFTQSPRIRSSNPQVSPGSSSKRPPLLSRPP 60

Query: 61  KPTVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFN 120
           KPTVSP   P+  TTG+SFQ RHRTFLQN KTGN TA+EALQFFDL +   PTPAMSSFN
Sbjct: 61  KPTVSPEDSPEELTTGISFQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFN 120

Query: 121 LVLSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRR 180
           L+L GLAKIKHYSEV  LY R+SLAG+LPN ITLN+L+NCLCNVNRVSEGLAAMAGIIRR
Sbjct: 121 LLLGGLAKIKHYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRR 180

Query: 181 GYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIA 240
           GY PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGC P+VITYGTLIKGLCQTGNTNIA
Sbjct: 181 GYIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIA 240

Query: 241 LKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSY 300
           LKLHEEMLNGTGRYGI CKPNVICY+TIIDGLCKDG EDKA ELF+EMKA+ +LPDV+SY
Sbjct: 241 LKLHEEMLNGTGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISY 300

Query: 301 TSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMI 360
           +SLIHGF   GKWEEAK L NEMVD GVQPN  TFNVLMDMLCK G+VI AKELLE+M+ 
Sbjct: 301 SSLIHGFCYGGKWEEAKSLFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQ 360

Query: 361 QSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLE 420
                P LF YNTL+DGFCLVGDLNSARELF ++P+KGCEPN++SY VLINGYCKN K+E
Sbjct: 361 GGNNAPDLFTYNTLMDGFCLVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKME 420

Query: 421 EAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFL 480
           EAMK+YNEMLQ+GI+P VITYN+LLTGLFQA  V DAKK+FG+IQA+G  PSS T+S FL
Sbjct: 421 EAMKLYNEMLQVGIRPSVITYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFL 480

Query: 481 DGLCKNDCLLEAMEIFNELS-YDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLL 540
           DGLCKNDCLLEA+E+FN L  Y+LKLNI IFNC+IDGLCKAGK+ETAWELF+K S +GLL
Sbjct: 481 DGLCKNDCLLEAIELFNGLKPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLL 540

Query: 541 PTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVEL 600
           P VVT++IMI+G CK+GQLEKA DLF+KMEENGCTP++ITYNTL++GFY++ K EE+VEL
Sbjct: 541 PNVVTYSIMIHGLCKDGQLEKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVEL 600

Query: 601 LHKMVQKNVLPNTYTCSTVLYML-EDEKYREFLNLLPTFPTQECQG 636
           LH+MV+KNVLP+  TC+ VL ML EDEKY+E LNLLP FP QEC+G
Sbjct: 601 LHRMVKKNVLPDASTCTIVLDMLSEDEKYQECLNLLPRFPAQECRG 644

BLAST of CaUC01G008590 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.8e-220
Identity = 376/561 (67.02%), Postives = 465/561 (82.89%), Query Frame = 0

Query: 77  FLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQLYYRISLA 136
           FL+N KTGN TA++A  FFDL + + P P++SSF+ +L GLAKIKHYS +F LY ++ LA
Sbjct: 10  FLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKMRLA 69

Query: 137 GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEA 196
           GL P+ ITLN+LVNCLCNVNRVSE LA MAG++RRGY PN VTYT+LIKGLCMEHRI EA
Sbjct: 70  GLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEA 129

Query: 197 TRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICY 256
           TRLF+RMQKLGC P+V+TYGTL+KGLCQTGN NIALKLH+EMLN T +YGINCKPNV  Y
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNY 189

Query: 257 NTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVD 316
           N IIDGLCK G+ED+A ELF+EMKA+ ++P+V+SY+SLIHGF  + KWEE+K L +EMVD
Sbjct: 190 NIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVD 249

Query: 317 QGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLN 376
           QGVQP+  TF+VL+D LCK G+VI AK+L EV MIQ GIVP LF Y++L++GFC+VGDLN
Sbjct: 250 QGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEV-MIQRGIVPDLFIYSSLMEGFCMVGDLN 309

Query: 377 SARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALL 436
           SARELF S+PSKGCEP+++SYTVLINGYCK  K+EEAMK+YNEML +G +P VITY ALL
Sbjct: 310 SARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALL 369

Query: 437 TGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNEL-SYDLK 496
           TGLF A KV DAKK+F  ++A G   +S  + I LDGLCKN CL EAM++F EL SY+ K
Sbjct: 370 TGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFK 429

Query: 497 LNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDL 556
           L+I  ++C+IDGLCK GK+ETAWELF KLS +GL P VVT++IMI+G C+EGQ++KAN L
Sbjct: 430 LDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVL 489

Query: 557 FQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYML-E 616
            QKME NGC P++ITYNTL++GFY+S K +E+V+LLH MV+K+VLP+  TCS V+ ML +
Sbjct: 490 IQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCK 549

Query: 617 DEKYREFLNLLPTFPTQECQG 636
           DEKY+E L+LLP F  Q+ QG
Sbjct: 550 DEKYQECLDLLPRFSVQKHQG 569

BLAST of CaUC01G008590 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 3.1e-220
Identity = 376/561 (67.02%), Postives = 464/561 (82.71%), Query Frame = 0

Query: 77  FLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQLYYRISLA 136
           FL+N KTGN TA++A  FFDL + + P P +SSF+ +L GLAKIKHYS +F LY ++ LA
Sbjct: 10  FLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKMRLA 69

Query: 137 GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEA 196
           GL P+ ITLN+LVNCLCNVNRVSE LA MAG++RRGY PN VTYT+LIKGLCMEHRI EA
Sbjct: 70  GLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEA 129

Query: 197 TRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICY 256
           TRLF+RMQKLGC P+V+TYGTL+KGLCQTGN NIALKLH+EMLN T +YGINCKPNV  Y
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNY 189

Query: 257 NTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVD 316
           N IIDGLCK G+ED+A ELF+EMKA+ ++P+V+SY+SLIHGF  + KWEE+K L +EMVD
Sbjct: 190 NIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVD 249

Query: 317 QGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLN 376
           QGVQP+  TF+VL+D LCK G+VI AK+L EV MIQ GIVP LF Y++L++GFC+VGDLN
Sbjct: 250 QGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEV-MIQRGIVPDLFIYSSLMEGFCMVGDLN 309

Query: 377 SARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALL 436
           SARELF S+PSKGCEP+++SYTVLINGYCK  K+EEAMK+YNEML +G +P VITY ALL
Sbjct: 310 SARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALL 369

Query: 437 TGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNEL-SYDLK 496
           TGLF A KV DAKK+F  ++A G   +S  + I LDGLCKN CL EAM++F EL SY+ K
Sbjct: 370 TGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFK 429

Query: 497 LNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDL 556
           L+I  ++C+IDGLCK GK+ETAWELF KLS +GL P VVT++IMI+G C+EGQ++KAN L
Sbjct: 430 LDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVL 489

Query: 557 FQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYML-E 616
            QKME NGC P++ITYNTL++GFY+S K +E+V+LLH MV+K+VLP+  TCS V+ ML +
Sbjct: 490 IQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCK 549

Query: 617 DEKYREFLNLLPTFPTQECQG 636
           DEKY+E L+LLP F  Q+ QG
Sbjct: 550 DEKYQECLDLLPRFSVQKHQG 569

BLAST of CaUC01G008590 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 7.3e-113
Identity = 221/613 (36.05%), Postives = 347/613 (56.61%), Query Frame = 0

Query: 44  SKSPHLLSKPTVSPHFPPKNSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANP 103
           S    +L K T   H+    +   LS+++R R  + + K      ++A+  F+  + + P
Sbjct: 13  SNFTQILEKGTSLLHY-SSITEAKLSYKERLRNGIVDIK-----VNDAIDLFESMIQSRP 72

Query: 104 TPAMSSFNLVLSGLAKIKHYSEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLA 163
            P    FN + S +A+ K Y  V      + L G+  ++ T+ +++NC C   ++    +
Sbjct: 73  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 132

Query: 164 AMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLC 223
            +    + GY P+T+T+++L+ G C+E R+ EA  L  RM ++  RPD++T  TLI GLC
Sbjct: 133 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 192

Query: 224 QTGNTNIALKLHEEML--------------------NGTGRYGI---------NCKPNVI 283
             G  + AL L + M+                    +G     +         N K +V+
Sbjct: 193 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 252

Query: 284 CYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEM 343
            Y+ +ID LCKDG  D A+ LF EM+ + I  DVV+Y+SLI G    GKW++   +L EM
Sbjct: 253 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 312

Query: 344 VDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGD 403
           + + + P+  TF+ L+D+  K G+++ AKEL    MI  GI P    YN+L+DGFC    
Sbjct: 313 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENC 372

Query: 404 LNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNA 463
           L+ A ++FD + SKGCEP++V+Y++LIN YCK  ++++ M+++ E+   G+ P  ITYN 
Sbjct: 373 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 432

Query: 464 LLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD- 523
           L+ G  Q+ K++ AK++F  + + G  PS  T+ I LDGLC N  L +A+EIF ++    
Sbjct: 433 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 492

Query: 524 LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKAN 583
           + L IGI+N II G+C A KV+ AW LF  LS KG+ P VVT+N+MI G CK+G L +A+
Sbjct: 493 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 552

Query: 584 DLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYML 626
            LF+KM+E+GCTPD  TYN L++           VEL+ +M       ++ T   V+ ML
Sbjct: 553 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 612

BLAST of CaUC01G008590 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 1.3e-109
Identity = 216/599 (36.06%), Postives = 343/599 (57.26%), Query Frame = 0

Query: 64  STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHY 123
           S   LS+++R R+ L + K     A +A+  F   +++ P P +  F+ + S +AK K Y
Sbjct: 50  SDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 109

Query: 124 SEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 183
             V  L  ++ L G+  NL TL++++NC C   ++    +AM  II+ GY PNT+T+++L
Sbjct: 110 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 169

Query: 184 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTG 243
           I GLC+E R+ EA  L  RM ++G +PD+IT  TL+ GLC +G    A+ L ++M+    
Sbjct: 170 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---- 229

Query: 244 RYGINCKP---------NVIC--------------------------YNTIIDGLCKDGQ 303
            YG  C+P         NV+C                          Y+ IIDGLCK G 
Sbjct: 230 EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 289

Query: 304 EDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNV 363
            D A  LF EM+ + I  ++++Y  LI GF  +G+W++   LL +M+ + + PN  TF+V
Sbjct: 290 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 349

Query: 364 LMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSK 423
           L+D   K G++  A+E L   MI  GI P    Y +L+DGFC    L+ A ++ D + SK
Sbjct: 350 LIDSFVKEGKLREAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 409

Query: 424 GCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDA 483
           GC+PN+ ++ +LINGYCK  ++++ ++++ +M   G+    +TYN L+ G  +  K++ A
Sbjct: 410 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 469

Query: 484 KKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDG 543
           K++F  + +    P+  T+ I LDGLC N    +A+EIF ++    ++L+IGI+N II G
Sbjct: 470 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 529

Query: 544 LCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPD 603
           +C A KV+ AW+LF  L  KG+ P V T+NIMI G CK+G L +A  LF+KMEE+G  PD
Sbjct: 530 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 589

Query: 604 VITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYMLEDEKYRE-FLNLL 626
             TYN L++         + V+L+ ++ +     +  T   V+ ML D + ++ FL++L
Sbjct: 590 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

BLAST of CaUC01G008590 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 393.7 bits (1010), Expect = 2.9e-109
Identity = 199/551 (36.12%), Postives = 326/551 (59.17%), Query Frame = 0

Query: 64  STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHY 123
           S   + F++R R+ + + K       +A+  F   + + P P++  F+   S +A+ K +
Sbjct: 50  SNGNVCFRERLRSGIVDIK-----KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 109

Query: 124 SEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 183
           + V     ++ L G+  N+ TLN+++NC C   +     + +  +++ GY P+T T+ +L
Sbjct: 110 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 169

Query: 184 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTG 243
           IKGL +E ++ EA  L  RM + GC+PDV+TY +++ G+C++G+T++AL L  +M     
Sbjct: 170 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-- 229

Query: 244 RYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSLIHGFGRSGK 303
               N K +V  Y+TIID LC+DG  D A+ LFKEM+ + I   VV+Y SL+ G  ++GK
Sbjct: 230 ----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 289

Query: 304 WEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYN 363
           W +   LL +MV + + PN  TFNVL+D+  K G++  A EL +  MI  GI P++  YN
Sbjct: 290 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYN 349

Query: 364 TLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAMKIYNEMLQM 423
           TL+DG+C+   L+ A  + D +    C P++V++T LI GYC   ++++ MK++  + + 
Sbjct: 350 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 409

Query: 424 GIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGLCKNDCLLEA 483
           G+    +TY+ L+ G  Q+ K+  A+++F  + +HG +P   T+ I LDGLC N  L +A
Sbjct: 410 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 469

Query: 484 MEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTVVTHNIMIYG 543
           +EIF +L    + L I ++  II+G+CK GKVE AW LF  L  KG+ P V+T+ +MI G
Sbjct: 470 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 529

Query: 544 YCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHKMVQKNVLPN 603
            CK+G L +AN L +KMEE+G  P+  TYNTL++   +        +L+ +M       +
Sbjct: 530 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 588

Query: 604 TYTCSTVLYML 614
             +   V+ ML
Sbjct: 590 ASSIKMVIDML 588

BLAST of CaUC01G008590 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 390.6 bits (1002), Expect = 2.4e-108
Identity = 212/589 (35.99%), Postives = 344/589 (58.40%), Query Frame = 0

Query: 74  HRTFLQNYKTGNFTASEALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQL---- 133
           +R  L+N  +      +A+  F   + + P P++  FN +LS +AK+  +  V  L    
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 134 ---------------------YYRISLA----------GLLPNLITLNVLVNCLCNVNRV 193
                                  ++SLA          G  P+++TL+ L+N  C+  R+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 194 SEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTL 253
           S+ +A +  ++  GY P+T T+T+LI GL + ++  EA  L  +M + GC+PD++TYGT+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 254 IKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKE 313
           + GLC+ G+ ++AL L ++M  G        + +V+ YNTIIDGLCK    D A+ LF E
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGLCKYKHMDDALNLFTE 289

Query: 314 MKARRILPDVVSYTSLIHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQ 373
           M  + I PDV +Y+SLI      G+W +A  LL++M+++ + PN  TF+ L+D   K G+
Sbjct: 290 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 349

Query: 374 VINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYT 433
           ++ A++L +  MI+  I P +F Y++L++GFC+   L+ A+ +F+ + SK C PN+V+Y+
Sbjct: 350 LVEAEKLYD-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 409

Query: 434 VLINGYCKNGKLEEAMKIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAH 493
            LI G+CK  ++EE M+++ EM Q G+    +TY  L+ G FQAR  D+A+ +F  + + 
Sbjct: 410 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 469

Query: 494 GPVPSSDTFSIFLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETA 553
           G  P+  T++I LDGLCKN  L +AM +F  L    ++ +I  +N +I+G+CKAGKVE  
Sbjct: 470 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 529

Query: 554 WELFNKLSHKGLLPTVVTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQG 613
           WELF  LS KG+ P V+ +N MI G+C++G  E+A+ L +KM+E+G  P+  TYNTL++ 
Sbjct: 530 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 589

Query: 614 FYKSKKREEMVELLHKMVQKNVLPNTYTCSTVLYMLEDEKY-REFLNLL 626
             +   RE   EL+ +M       +  T   V  ML D +  + FL++L
Sbjct: 590 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

BLAST of CaUC01G008590 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 386.7 bits (992), Expect = 3.5e-107
Identity = 209/573 (36.47%), Postives = 335/573 (58.46%), Query Frame = 0

Query: 90  EALQFFDLSMNANPTPAMSSFNLVLSGLAKIKHYSEVFQL------------YYRISL-- 149
           +A+  F   + + P P++  F+ +LS +AK+  +  V  L            +Y  S+  
Sbjct: 64  DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123

Query: 150 ---------------------AGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYT 209
                                 G  PN++TL+ L+N  C+  R+SE +A +  +   GY 
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183

Query: 210 PNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKL 269
           PNTVT+ +LI GL + ++  EA  L  RM   GC+PD++TYG ++ GLC+ G+T++A  L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243

Query: 270 HEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFKEMKARRILPDVVSYTSL 329
             +M  G        +P V+ YNTIIDGLCK    D A+ LFKEM+ + I P+VV+Y+SL
Sbjct: 244 LNKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 303

Query: 330 IHGFGRSGKWEEAKCLLNEMVDQGVQPNTTTFNVLMDMLCKVGQVINAKELLEVMMIQSG 389
           I      G+W +A  LL++M+++ + P+  TF+ L+D   K G+++ A++L +  M++  
Sbjct: 304 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD-EMVKRS 363

Query: 390 IVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKLEEAM 449
           I PS+  Y++L++GFC+   L+ A+++F+ + SK C P++V+Y  LI G+CK  ++EE M
Sbjct: 364 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 423

Query: 450 KIYNEMLQMGIKPCVITYNALLTGLFQARKVDDAKKIFGIIQAHGPVPSSDTFSIFLDGL 509
           +++ EM Q G+    +TYN L+ GLFQA   D A++IF  + + G  P+  T++  LDGL
Sbjct: 424 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 483

Query: 510 CKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPTV 569
           CKN  L +AM +F  L    ++  I  +N +I+G+CKAGKVE  W+LF  LS KG+ P V
Sbjct: 484 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 543

Query: 570 VTHNIMIYGYCKEGQLEKANDLFQKMEENGCTPDVITYNTLLQGFYKSKKREEMVELLHK 626
           V +N MI G+C++G  E+A+ LF++M+E+G  P+   YNTL++   +   RE   EL+ +
Sbjct: 544 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 603

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038874245.11.8e-29980.56pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin... [more]
XP_022992036.15.4e-29178.54pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima][more]
XP_023548637.17.7e-29078.54pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp... [more]
XP_022953742.12.5e-28878.21putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C... [more]
KAG7014482.17.2e-28878.07Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q6NQ831.0e-11136.05Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
P0C7Q76.3e-10935.99Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q0WKV31.8e-10836.06Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9LQ163.4e-10735.99Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Q9SXD15.0e-10636.47Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1JSG42.6e-29178.54pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O... [more]
A0A6J1GP311.2e-28878.21putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
A0A6J1DSW34.4e-27574.61pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti... [more]
A0A5D3C8J01.8e-22067.02Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DYL63.1e-22067.02pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
AT3G22470.17.3e-11336.05Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.11.3e-10936.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12700.12.9e-10936.12ATP binding;nucleic acid binding;helicases [more]
AT1G62910.12.4e-10835.99Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62670.13.5e-10736.47rna processing factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 350..478
e-value: 1.6E-38
score: 134.9
coord: 245..349
e-value: 2.1E-37
score: 131.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 81..244
e-value: 6.8E-35
score: 122.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 479..624
e-value: 7.9E-36
score: 125.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 89..452
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 109..133
e-value: 1.2
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 175..224
e-value: 8.6E-18
score: 64.3
coord: 251..298
e-value: 1.6E-17
score: 63.4
coord: 427..476
e-value: 2.0E-11
score: 43.9
coord: 531..578
e-value: 1.2E-17
score: 63.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 318..349
e-value: 4.7E-7
score: 29.4
coord: 388..420
e-value: 2.1E-14
score: 52.9
coord: 494..523
e-value: 7.5E-9
score: 35.2
coord: 354..383
e-value: 4.0E-8
score: 32.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 466..490
e-value: 0.0016
score: 16.4
coord: 569..603
e-value: 2.4E-6
score: 25.3
coord: 362..393
e-value: 9.7E-8
score: 29.7
coord: 325..358
e-value: 7.1E-5
score: 20.7
coord: 534..568
e-value: 8.3E-13
score: 45.7
coord: 289..323
e-value: 1.5E-10
score: 38.5
coord: 500..532
e-value: 1.3E-8
score: 32.4
coord: 254..288
e-value: 2.4E-11
score: 41.1
coord: 430..463
e-value: 9.6E-5
score: 20.3
coord: 143..177
e-value: 0.0018
score: 16.4
coord: 178..212
e-value: 1.0E-8
score: 32.8
coord: 395..427
e-value: 1.2E-11
score: 42.0
coord: 213..239
e-value: 1.0E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 13.920909
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..241
score: 10.062531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 176..210
score: 12.75901
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 567..601
score: 11.728648
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 15.258187
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 141..175
score: 9.13082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 9.821383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..357
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 13.416689
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 497..531
score: 12.189023
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 532..566
score: 13.93187
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 11.8273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..69
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 350..466
coord: 392..625
coord: 89..393

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G008590.1CaUC01G008590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050794 regulation of cellular process
molecular_function GO:0005515 protein binding