CaUC01G008270 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G008270
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Ciama_Chr01: 9336957 .. 9342498 (+)
RNA-Seq Expression	CaUC01G008270
Synteny	CaUC01G008270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGTATCAAAATACTCACCGTGTAGGGAAAACGAAGTCGAGGTCAAATTTTCTCCTGCAAATTGGGGAAAAAGAAGCCGATTTTGTCGCCTCCATTCGAATCCTCCATACCCTTCGAAGCCCTGTTTTCCATTTCATAAAATTTTCCCGGCGGAAGAGTTCGATTTTTCTTCACCAAGATGTTGAGGATTGCGGCACGAAGGCTTTCTTCAATCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTAGAGTTCGCTTCCGTATTCTATGAAATAATTTTGTTATTTCTGGCTGTAGTTGATTTATGGCGTTTTTTAGGGTTTTTTTTTTTTTTTTTTTTTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTGTTGCTAGAAAGGGAAATCCTTGTTTAGTGTTTTTGAGTTGTAGTTTTGTCACTTGCTTGTGTAGCTATCATTGGGTTTAGCTGTAGATGGGGATCGGGAATTGTGTTTATTGATCTGCTGTTTAGTCGCATTGATTATGTTGAATCATGTTTTGGATATTCATTTCTCGTTTGTGATAATAATGTGAAAAAGTGAGAGTGGGGTTGTGTTTTTGGGGGATATCACTTAGCCGAAGCAATCACTTCCTCGTGGTGTCTATGTTTGAATCTTCAACCGATTATTTTCTTAGTCTTTAACTTGTTATTACCATCATGTTTGCATATCCGTTTCTCATTCTGGCAACATTGAGAACGTGAAATGTTATTTACATTATGTATTTTTGCAGCAATATGATGGCATCCCTTTGCTGAAGCAATCTCTAATTTTTTATTCCTAATTCTTTCACCGTTGCTCTCCAAAATTTTTAACTTTATGTTTGGTGGTCTACCACCCGAAACTGTATGCTTTTGTTCATATACTATACTTCCGAGACTTGTACTTCTCTCTATCTCTTTTAAAATTTTTCGTCTTTTTGATTGTGGAGATGCACACATGAACTAAAGAGCTGATGTTTCAAATGGTACATGGTTTTTGGTAATTTGATTTTGGTTGCTCTGGTGGCCTCTTTGAGTGTGTAAGTTTAAGTGTGACTTGTGAGAGTTATATTTCTTTTTCTAATAGAGGTTAAAATTAGTCAGTTTAAGCATTTAAGGTTTCTGTTTGTTCGGTGCTGATAAAATTGTGCATTAATCCATTTTGCATACTCACCAAATCTTGATCAATGGATGTTAAGAAAATAGGCTTAATGTTCTTTTTGTTCGTATTGGTACAAGATTACAAAAGGAGTCTAAGACTAGCCGAAGAGACCTATCTTCAAAAGATGTATCATTTCGTTCGGTCCATAAGTGCCACAGTAACACTCTAGTGCACAGCTACCCAAAATCCTAGCTTTGCCCATCAAGTTCCAACCATTAAGACCTTCAAGGAGCCAATCATCAATTATTCGAGGAGAAACAACATCAAACCCAACTTCTCAAAATAAAGCTCTAGGCCTTATAAGCTAAAGAGCAATGGAGAACCAAGTGGTAACATCTGTTGGATCACATCATCAGTATTAAGGCTTCTAAAAGACATAGACCAGACAAGGACTTCAACTTTCGTAGGGCACTTACTTTTCCAGACTAACTTGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGGGGGGGGGGGGGTGTCATAGTTAGTACCAACTACAATTTTTTTTTATCCCCATCATTTTTAAGCTTGAAAATGATCTAGATATAGGCAAAGATAAAACAATGTTAAGATTTTCTTGGATTCAAAACAGATAGATTTTATCATTTGCGTGTCAAAAGTGAATTATCTCCTTGCCACGTGGAGAACCCTAACTAGACTTTTGTCCATACTTGTTAATACTGGCCTGCTGAGGACACACTACCATGAGGAAGAGGAGGGGAATGAGAGACCTCCTTGTCTAACACCCTTAATAGTTCTAGGAAGAACTCTCCTCAGCTATCAGCCAGTACCTTCACAACAATCGTATACAAGCTAGTAACCAAGCTGATTGGTTTGTGAAACCCTTCACACTTAGAGCATATTCCTTTCTTGGACATAAGACAAATATTGGTTTCATCCTCTAAATTAGCACTTCTCATGAAACTCACTACCTAACTTAACCGAAATCTCTCTTGATCAAATCTCAATCTTTTGGATCAAATGCCAGAGTGGAACCATCATGCTTGAGATCCTTACTATTTATTGTAATTTGTCGTCAAAGCTGAAATAATCTCTCTTTATCTTTTCAACATAGAAGAAGCCTCTAACCTTTCCTTCCACAAACCTAGAGTAAACAGAAACAGAACCAAAAAAAAGTAGAGGAAGACAAGTTTTCCCCCTTAATTGCTGCCCCCTCGATCCGGTGTGTCATCCTCTCCTGAAAGAGACTCAATGACGTTCCTATTTCTTCTAATCTTGCAACTTCATGGTAGAATGAAGTGCTACGATCTCCCTCTCTCCCATTTTAACCCTAGAGAAATAGATACTCTCCCTCTCTAACTAATTCCTCAAACTTCCCCTTACCTGCACTTCTCTGAACTCTTCACTAAGAGTACCAAGGATAACTAATTTCTTAAGTTTTGCTTGAATGAAATAATGAAGAAATGACCACACTCCTAGGAAAATGGCATCCTGTAGTCTTGAATGCATAAAGAAAATATAATTGTTTATGAAAAAGCTTCAAACTTACTGCCTAGAATTTGTCAAAAGTTTAACCCTGCATATAGGTTATGGTTACAAACTCATTCAAACTTAAACACAGAAAATCACTAAATTTTGCACCAATAAGCAGGCAGCATAAATTTGAGGAAGATCTTGAGCATTCTGGCTCAGGTGATTGATTGGATGATTGCTTTTATATATTTTGTAACTCAGCCCTTTTATTATGAGTGATTATTCCTTTCTCTTGTGGTGAAGTTTTATGATTTTATAGAAATATCTCTTTGCTAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAAGAAATCAAGCTATTTTTCTGGGTTTGTAGTGGTTTTGGAACCTTCATCAATGATAATGTCGAAGATTTGTTGCAGACATATTTTATTTTTCTACTCAATTTCTTTGAGTTGATCTTTATGTAATGAGAATACTGTAACTCCCGTATCTTGGTGCATGAATGAATCTGAATAAGTTGCTTGAATGGGGTGTTGCCTTCTTTCGATTTTGGTTGGTAATAGACTTTTGATAGTGAAATAGCCACCAAATTTTCATTGTATGGTTTTTGTGATGAAGCAAATGAGCAAAGTTTCTTTCATTTCTCTGACGAAAGCTCAGTTCGGTTTATGGACTTGCTAATTAATTGAGCATTTTGTTGCATATTTCTTCTTCTTCTTAATTGAGCATTTGGTTGCATATTTCTTCTCGATGGTAGAGTAGTTCTAGAGAGCATTTTGG

mRNA sequence

CACGTATCAAAATACTCACCGTGTAGGGAAAACGAAGTCGAGGTCAAATTTTCTCCTGCAAATTGGGGAAAAAGAAGCCGATTTTGTCGCCTCCATTCGAATCCTCCATACCCTTCGAAGCCCTGTTTTCCATTTCATAAAATTTTCCCGGCGGAAGAGTTCGATTTTTCTTCACCAAGATGTTGAGGATTGCGGCACGAAGGCTTTCTTCAATCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGAGGTTAAAATTAGTCAGTTTAAGCATTTAAGTTCTAGGAAGAACTCTCCTCAGCTATCAGCCAGTACCTTCACAACAATCGTATACAAGCTAGTAACCAAGCTGATTGGTTTAGTGGAACCATCATGCTTGAGATCCTTACTATTTATTGTTATGGTTACAAACTCATTCAAACTTAAACACAGAAAATCACTAAATTTTGCACCAATAAGCAGGCAGCATAAATTTGAGGAAGATCTTGAGCATTCTGGCTCAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAAGAAATCAAGCTATTTTTCTGGGTTTGTAGTGGTTTTGGAACCTTCATCAATGATAATGTCGAAGATTTGTTGCAGACATATTTTATTTTTCTACTCAATTTCTTTGAGTTGATCTTTATGTAATGAGAATACTGTAACTCCCGTATCTTGGTGCATGAATGAATCTGAATAAGTTGCTTGAATGGGGTGTTGCCTTCTTTCGATTTTGGTTGGTAATAGACTTTTGATAGTGAAATAGCCACCAAATTTTCATTGTATGGTTTTTGTGATGAAGCAAATGAGCAAAGTTTCTTTCATTTCTCTGACGAAAGCTCAGTTCGGTTTATGGACTTGCTAATTAATTGAGCATTTTGTTGCATATTTCTTCTTCTTCTTAATTGAGCATTTGGTTGCATATTTCTTCTCGATGGTAGAGTAGTTCTAGAGAGCATTTTGG

Coding sequence (CDS)

ATGTTGAGGATTGCGGCACGAAGGCTTTCTTCAATCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGAGGTTAAAATTAGTCAGTTTAAGCATTTAAGTTCTAGGAAGAACTCTCCTCAGCTATCAGCCAGTACCTTCACAACAATCGTATACAAGCTAGTAACCAAGCTGATTGGTTTAGTGGAACCATCATGCTTGAGATCCTTACTATTTATTGTTATGGTTACAAACTCATTCAAACTTAAACACAGAAAATCACTAAATTTTGCACCAATAAGCAGGCAGCATAAATTTGAGGAAGATCTTGAGCATTCTGGCTCAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSFKLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG

Homology

[Close]

BLAST of CaUC01G008270 vs. NCBI nr
Match: XP_038874813.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-138
Identity = 265/359 (73.82%), Postives = 272/359 (75.77%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARRLSS+SSSHFRPTIASSLPSSHKIIDGSDSA S+DFRSFNTFPFGPHFDR+CR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSASSSDFRSFNTFPFGPHFDRSCR 60

Query: 61  EVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSFKLK 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 HRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVY 180
                                    GFASDALTSTKEN LVPDVPATVAAVKNPTSKIVY
Sbjct: 121 -------------------------GFASDALTSTKENILVPDVPATVAAVKNPTSKIVY 180

Query: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240
           DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD
Sbjct: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240

Query: 241 LSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIG 300
           LSSIEPG+TVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWL+VIG
Sbjct: 241 LSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDLGSLRDPQQDGERVKDPEWLVVIG 274

Query: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CaUC01G008270 vs. NCBI nr
Match: XP_023550035.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.7 bits (1275), Expect = 3.3e-136
Identity = 261/362 (72.10%), Postives = 270/362 (74.59%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSS+SSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           NCR                                                         
Sbjct: 61  NCR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTSTKE +LVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWLI
Sbjct: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLI 277

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 277

[Close]

BLAST of CaUC01G008270 vs. NCBI nr
Match: XP_022992734.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 495.7 bits (1275), Expect = 3.3e-136
Identity = 259/359 (72.14%), Postives = 268/359 (74.65%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARR SS+SSSHFRPTIASSLP SHKIIDG DSA SNDFRSFNTFPFGP FDRNCR
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIIDGGDSASSNDFRSFNTFPFGPIFDRNCR 60

Query: 61  EVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSFKLK 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 HRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVY 180
                                    GFASDALTSTKE +LVPDVPATVAAVKNPTSKIVY
Sbjct: 121 -------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSKIVY 180

Query: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240
           DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD
Sbjct: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240

Query: 241 LSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIG 300
           LSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWLIV+G
Sbjct: 241 LSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVG 274

Query: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           VCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 301 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of CaUC01G008270 vs. NCBI nr
Match: XP_022938899.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 2.8e-135
Identity = 260/362 (71.82%), Postives = 269/362 (74.31%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSS+SSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           NCR                                                         
Sbjct: 61  NCR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTSTKE +LVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQD ERVKDPEWLI
Sbjct: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLI 277

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 277

[Close]

BLAST of CaUC01G008270 vs. NCBI nr
Match: KAG6579100.1 (hypothetical protein SDJN03_23548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-134
Identity = 259/362 (71.55%), Postives = 268/362 (74.03%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSS+SSSHFRPTIASSLP SHK IDG DSAPSND R   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKTIDGGDSAPSNDSRSVTSFNTFPFGPFFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           NCR                                                         
Sbjct: 61  NCR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTSTKE +LVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWLI
Sbjct: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLI 277

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 277

[Close]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.5e-110
Identity = 186/218 (85.32%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 142 HSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYF 201
           H   GF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYF
Sbjct: 55  HHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYF 114

Query: 202 VLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFI 261
           VL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFI
Sbjct: 115 VLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI 174

Query: 262 RRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFC 321
           RRRTE+DI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFC
Sbjct: 175 RRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFC 234

Query: 322 PCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           PCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 235 PCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot
Match: P51134 (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.5e-110
Identity = 186/215 (86.51%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 145 SGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLS 204
           SGF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+
Sbjct: 22  SGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLT 81

Query: 205 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRR 264
           GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRR
Sbjct: 82  GGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 141

Query: 265 TEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCH 324
           TE+DI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCH
Sbjct: 142 TEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCH 201

Query: 325 GSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           GSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 202 GSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

[Close]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.1e-110
Identity = 186/218 (85.32%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 142 HSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYF 201
           H   GF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYF
Sbjct: 41  HHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYF 100

Query: 202 VLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFI 261
           VL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFI
Sbjct: 101 VLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI 160

Query: 262 RRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFC 321
           RRRTE+DI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFC
Sbjct: 161 RRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC 220

Query: 322 PCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           PCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 221 PCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258

[Close]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.3e-108
Identity = 183/214 (85.51%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 146 GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 205
           GF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 55  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 114

Query: 206 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 265
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 115 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 174

Query: 266 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 325
           EEDI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 175 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 234

Query: 326 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 235 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot
Match: P51135 (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.1e-108
Identity = 182/214 (85.05%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 146 GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 205
           GF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 55  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 114

Query: 206 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 265
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 115 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 174

Query: 266 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 325
           +EDI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 175 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 234

Query: 326 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 235 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL
Match: A0A6J1JYB8 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488983 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.6e-136
Identity = 259/359 (72.14%), Postives = 268/359 (74.65%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARR SS+SSSHFRPTIASSLP SHKIIDG DSA SNDFRSFNTFPFGP FDRNCR
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIIDGGDSASSNDFRSFNTFPFGPIFDRNCR 60

Query: 61  EVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSFKLK 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 HRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVY 180
                                    GFASDALTSTKE +LVPDVPATVAAVKNPTSKIVY
Sbjct: 121 -------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSKIVY 180

Query: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240
           DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD
Sbjct: 181 DEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVD 240

Query: 241 LSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIG 300
           LSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWLIV+G
Sbjct: 241 LSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVG 274

Query: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           VCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 301 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL
Match: A0A6J1FFG4 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444974 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.3e-135
Identity = 260/362 (71.82%), Postives = 269/362 (74.31%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSS+SSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           NCR                                                         
Sbjct: 61  NCR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTSTKE +LVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSTKETDLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDPQQD ERVKDPEWLI
Sbjct: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLI 277

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 277

[Close]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL
Match: A0A0A0KNC0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 9.0e-132
Identity = 256/362 (70.72%), Postives = 265/362 (73.20%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLR+AARRLSS+SSSHFRPTIASSLP SH IID +D   SNDFRS   F+TFP  PHFDR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           N R                                                         
Sbjct: 61  NSR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTSTKENNLVPDVPAT+AAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSTKENNLVPDVPATIAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWL+
Sbjct: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLV 274

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 274

[Close]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.2e-131
Identity = 257/362 (70.99%), Postives = 264/362 (72.93%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSS+SSSHFRPTIASSLP SH IID +D   SNDFRS   FNTFP GPHFDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           N R                                                         
Sbjct: 61  NSR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDAL+S KE NLVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALSSMKETNLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPG+TVTVKWRGKPVFIRRRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWLI
Sbjct: 241 EVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLI 274

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           V+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL
Sbjct: 301 VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 274

[Close]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL
Match: A0A6J1JKV0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487805 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.5e-131
Identity = 253/362 (69.89%), Postives = 265/362 (73.20%), Query Frame = 0


Query: 1   MLRIAARRLSSISSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLR+AARRLSS+SSSHFRP+IA SLP SHKI+DG DSAPSNDFR   SFNTF FG +F  
Sbjct: 1   MLRVAARRLSSLSSSHFRPSIAPSLPGSHKIVDGGDSAPSNDFRSVSSFNTFAFGSNFAP 60

Query: 61  NCREVKISQFKHLSSRKNSPQLSASTFTTIVYKLVTKLIGLVEPSCLRSLLFIVMVTNSF 120
           NCR                                                         
Sbjct: 61  NCR--------------------------------------------------------- 120

Query: 121 KLKHRKSLNFAPISRQHKFEEDLEHSGSGFASDALTSTKENNLVPDVPATVAAVKNPTSK 180
                                       GFASDALTS  ENNLVPDVPATVAAVKNPTSK
Sbjct: 121 ----------------------------GFASDALTSMGENNLVPDVPATVAAVKNPTSK 180

Query: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240
           IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL
Sbjct: 181 IVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASL 240

Query: 241 EVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLI 300
           EVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DIK+ANSVD+GSLRDPQQDGERVKDPEWLI
Sbjct: 241 EVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKIANSVDIGSLRDPQQDGERVKDPEWLI 277

Query: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 360
           VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLL
Sbjct: 301 VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLL 277

[Close]

BLAST of CaUC01G008270 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 380.9 bits (977), Expect = 1.1e-105
Identity = 179/214 (83.64%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 146 GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 205
           GFAS  +T   E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAYFVLSG
Sbjct: 61  GFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSG 120

Query: 206 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 265
           GRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 266 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 325
           E+DIKLANSVDVGSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 326 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CaUC01G008270 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 378.3 bits (970), Expect = 7.1e-105
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 146 GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 205
           GF+S  L    E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAYFVLSG
Sbjct: 59  GFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSG 118

Query: 206 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 265
           GRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVFIRRRT
Sbjct: 119 GRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRT 178

Query: 266 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 325
           E+DIKLANSVDVGSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 179 EDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 238

Query: 326 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 360
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 239 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CaUC01G008270 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 358
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 211

[Close]

BLAST of CaUC01G008270 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 301 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 358
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct: 137 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 192

The following BLAST results are available for this feature:

BLAST of CaUC01G008270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874813.1	1.2e-138	73.82	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]	[more]
XP_023550035.1	3.3e-136	72.10	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]
XP_022992734.1	3.3e-136	72.14	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima]	[more]
XP_022938899.1	2.8e-135	71.82	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata...	[more]
KAG6579100.1	1.1e-134	71.55	hypothetical protein SDJN03_23548, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CaUC01G008270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51132	5.5e-110	85.32	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P51134	5.5e-110	86.51	Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P49729	7.1e-110	85.32	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
P51133	2.3e-108	85.51	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P51135	5.1e-108	85.05	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]

BLAST of CaUC01G008270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYB8	1.6e-136	72.14	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]
A0A6J1FFG4	1.3e-135	71.82	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3...	[more]
A0A0A0KNC0	9.0e-132	70.72	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
A0A1S3CP16	1.2e-131	70.99	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1JKV0	1.5e-131	69.89	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]

BLAST of CaUC01G008270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13440.1	1.1e-105	83.64	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	7.1e-105	82.71	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	2.8e-08	43.86	photosynthetic electron transfer C	[more]
AT4G03280.2	2.8e-08	43.86	photosynthetic electron transfer C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 297..308 score: 67.29 coord: 319..331 score: 71.54 coord: 331..343 score: 69.81
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 181..230 e-value: 2.8E-11 score: 43.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 243..345 e-value: 4.4E-11 score: 42.6
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 289..357 score: 18.279629
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 215..359 e-value: 3.8E-55 score: 184.6
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 228..359 e-value: 3.4E-59 score: 200.7
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 221..358
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 132..359
None	No IPR available	PANTHER	PTHR10134:SF36	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 132..359
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 236..359 e-value: 1.12877E-86 score: 255.562
None	No IPR available	SUPERFAMILY	81502	ISP transmembrane anchor	coord: 170..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G008270.1	CaUC01G008270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity