CaUC01G008000 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G008000
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	Ciama_Chr01: 9013376 .. 9014395 (+)
RNA-Seq Expression	CaUC01G008000
Synteny	CaUC01G008000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGCGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTTACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTACTGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

mRNA sequence

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGCGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTTACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTACTGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGCGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTTACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTACTGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Protein sequence

MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN

Homology

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BLAST of CaUC01G008000 vs. NCBI nr
Match: XP_038876236.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 597.0 bits (1538), Expect = 9.8e-167
Identity = 318/339 (93.81%), Postives = 331/339 (97.64%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFAS+SSP+SSSLSSIFNFNASKSK VSLP NLRFAAPL RNSVSV+PFRVRASSVP
Sbjct: 1   MSSTFASISSPTSSSLSSIFNFNASKSKMVSLPNNLRFAAPLSRNSVSVHPFRVRASSVP 60

Query: 61  VPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVED 120
           V  NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EEDQRI ED
Sbjct: 61  VSRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDQRIAED 120

Query: 121 SDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           SDQ+GKQSSPLNDFLESNSEA+EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF
Sbjct: 121 SDQEGKQSSPLNDFLESNSEAIEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           LMARLLGEMGKTENAR+VFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL+IA
Sbjct: 181 LMARLLGEMGKTENAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALKIA 240

Query: 241 ENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKN 300
           ENENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENENKVKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           +EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 MEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 339

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BLAST of CaUC01G008000 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 568.9 bits (1465), Expect = 2.9e-158
Identity = 310/341 (90.91%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPL RNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPS---NHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRI 120
           +P    NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EED+++
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLL 300
           RIAE+ENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP DFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           DKNVEAR+QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

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BLAST of CaUC01G008000 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 4.1e-157
Identity = 307/343 (89.50%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQR 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of CaUC01G008000 vs. NCBI nr
Match: TYJ97188.1 (protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156
Identity = 306/343 (89.21%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQR 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P  VAEEASR+EE   D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of CaUC01G008000 vs. NCBI nr
Match: XP_004149472.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical protein Csa_017797 [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 1.6e-156
Identity = 306/345 (88.70%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFAS+SSPSSSS SSIFNFN S SK VS   NLRFAAPL R+SVSV+PFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VP---SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---D 120
           VP   ++HPVV CLRNYA+AAIL+GAAATMVGKFS+LPARAES   VAEEASR+EE   D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QRIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180
            RI EDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIY 300
           EALRIAENENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           SLLDKN+EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

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BLAST of CaUC01G008000 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 5.5e-96
Identity = 201/331 (60.73%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPV 67
           M S  S+S S + +F A K+  V+ P        +PR    +   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPL-------IPRR--DLLSIRIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVEDSDQDGKQ 127
            +  +++A++AIL+GAA +M GKFS LP +AESP    E+     +++++ E        
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE-------- 120

Query: 128 SSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLG 187
            +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLG
Sbjct: 121 ITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLG 180

Query: 188 EMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKK 247
           EMG+ ENAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   K
Sbjct: 181 EMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVK 240

Query: 248 EARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQF 307
           EARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEA++QF
Sbjct: 241 EARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQF 300

Query: 308 AKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           AKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 AKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

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BLAST of CaUC01G008000 vs. ExPASy Swiss-Prot
Match: O06917 (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0263 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 41/157 (26.11%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 153 LENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEA 212
           +E GE E+AL+ L + +   P++T      A +L  +GK + A D   +IL++      A
Sbjct: 125 IEFGEFEKALEALDEFLKIYPNLTSILRQKASILEILGKLDEALDCVNKILSIKKDDAHA 184

Query: 213 LFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKS 272
            +    ++ + G  +  L  L+ A+ +  NEN     +D+    A ++    N EEAL  
Sbjct: 185 WYLKGRILKKLGNIKEALDALKMAINL--NENLVHVYKDI----AYLELANNNYEEALNY 244

Query: 273 YKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQFAK 310
             + +++ P D    F   +IY  L+K  +A + + K
Sbjct: 245 ITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDK 275

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BLAST of CaUC01G008000 vs. ExPASy Swiss-Prot
Match: Q3UV71 (Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 3.4e-05
Identity = 42/184 (22.83%), Postives = 82/184 (44.57%), Query Frame = 0


Query: 139 SEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDV 198
           +   E L  L       G  +EAL++ ++ VS QPS  E +  +A++L  MG+T+ A  +
Sbjct: 740 ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKI 799

Query: 199 FEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQ 258
              I++  P   E     + +  +       L  +E+AL++   + K         ++++
Sbjct: 800 TSHIVSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPK---------VISE 859

Query: 259 IQFLQKN-------VEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQFAKYR 316
           + F + N       +++A +SY+  V  DP   + +   G I  +    V AR  + +  
Sbjct: 860 LFFTKGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERAL 914

[Close]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL
Match: A0A6J1CXB6 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015681 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.4e-158
Identity = 310/341 (90.91%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPL RNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPS---NHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRI 120
           +P    NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EED+++
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLL 300
           RIAE+ENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP DFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           DKNVEAR+QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL
Match: A0A1S3CRV7 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.0e-157
Identity = 307/343 (89.50%), Postives = 325/343 (94.75%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQR 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL
Match: A0A5D3BG83 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00680 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.8e-157
Identity = 306/343 (89.21%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQR 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P  VAEEASR+EE   D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL
Match: A0A6J1GYL7 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458452 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.3e-150
Identity = 299/339 (88.20%), Postives = 311/339 (91.74%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F +SKSK V  P NLRFAAP+ R SVSV+ FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVP-PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVED 120
           V  NHPVVQC +NYARAAIL+GAAATMVGKFSHLPARAESP  V EEASRIEE+QRIVED
Sbjct: 61  VSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVED 120

Query: 121 SDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           SDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWKF
Sbjct: 121 SDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           L ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRIA
Sbjct: 181 LKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIA 240

Query: 241 ENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKN 300
           ENE K KEARDVRLIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
            EARQQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL
Match: A0A6J1JQU3 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.3e-148
Identity = 299/340 (87.94%), Postives = 311/340 (91.47%), Query Frame = 0


Query: 1   MSSTFASMSSP-SSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSV 60
           MS TFASMSSP SSSSLSSI  F++SKSK V  P NLRFAAPL R SVSVY FRVRASSV
Sbjct: 1   MSFTFASMSSPSSSSSLSSI--FSSSKSKPVP-PPNLRFAAPLSRTSVSVYRFRVRASSV 60

Query: 61  PVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVE 120
           PV  NHPVVQC +NYARAAIL+GAAATMVGKFSHLPARAESP AV EEASR+EE+QRIVE
Sbjct: 61  PVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVE 120

Query: 121 DSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWK 180
           DSDQD +QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWK
Sbjct: 121 DSDQDRQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWK 180

Query: 181 FLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRI 240
           FL ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRI
Sbjct: 181 FLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRI 240

Query: 241 AENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDK 300
           AENE K KEARDVRLIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLDK
Sbjct: 241 AENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDK 300

Query: 301 NVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           N EARQQF KYRELSPKK+EVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 NEEARQQFGKYRELSPKKYEVDGYLRTPLSRMKIFGSDEN 337

[Close]

BLAST of CaUC01G008000 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 352.4 bits (903), Expect = 3.9e-97
Identity = 201/331 (60.73%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPV 67
           M S  S+S S + +F A K+  V+ P        +PR    +   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPL-------IPRR--DLLSIRIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVEDSDQDGKQ 127
            +  +++A++AIL+GAA +M GKFS LP +AESP    E+     +++++ E        
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE-------- 120

Query: 128 SSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLG 187
            +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLG
Sbjct: 121 ITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLG 180

Query: 188 EMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKK 247
           EMG+ ENAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   K
Sbjct: 181 EMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVK 240

Query: 248 EARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQF 307
           EARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEA++QF
Sbjct: 241 EARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQF 300

Query: 308 AKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           AKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 AKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of CaUC01G008000 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-34
Identity = 79/210 (37.62%), Postives = 127/210 (60.48%), Query Frame = 0


Query: 126 KQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARL 185
           ++   L ++L S+ + VEAL+SL++ ++++ +  EA++++ +L+  +P   EW  L A +
Sbjct: 114 EEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANI 173

Query: 186 LGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEG-EAVLRRLEEALRIAENEN 245
               G  E+A+  FEEIL  +PL  EA     +     G+   AV +R+EEA+   + E 
Sbjct: 174 FSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEK 233

Query: 246 KKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEAR 305
            +K+ RD +L++AQI+ ++    EALK Y+ELVKE+P DFRPY CQG+IY++L K  EA 
Sbjct: 234 NRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAE 293

Query: 306 QQFAKYRELSPKKFEVDGYLRTPLSRMKIF 335
           +QF K+R L PK      Y    +   K+F
Sbjct: 294 KQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]

BLAST of CaUC01G008000 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-32
Identity = 103/329 (31.31%), Postives = 172/329 (52.28%), Query Frame = 0


Query: 20  FNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASS-----VPVPSNHPVVQCLRNY 79
           F+ + + + S + PKNL  ++  P +S+     +  +S       P+P + P     R +
Sbjct: 14  FHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP----FRLF 73

Query: 80  ARAAILVGAAATMVGKFSHLPAR------AESPGAVAEEASRIEEDQRIVEDSDQDGKQS 139
               I +  AA ++    HL +       A  P   ++E   +EE++R            
Sbjct: 74  KSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEER------------ 133

Query: 140 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGE 199
             L++ L ++   V+AL+SL++ K+++ +  EA++++ +L+  +P   EW  L A +   
Sbjct: 134 -ALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTY 193

Query: 200 MGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEG---EAVLRRLEEALRIAENENK 259
            G  + A+  FEEILA +PL  EA   + LLM     G   + V  R+EEA+   + EN 
Sbjct: 194 SGDLDLAKTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENN 253

Query: 260 KKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQ 319
           + + RD +L++AQI+ ++    EALK Y+ELVKE+P DFRPY CQG+IY+LL K  +A +
Sbjct: 254 QNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEE 313

Query: 320 QFAKYRELSPKKFEVDGYLRTPLSRMKIF 335
           QF  +R+L PK      Y    +   K+F
Sbjct: 314 QFDNFRKLVPKNHPYREYFMDNMIATKLF 323

[Close]

BLAST of CaUC01G008000 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 9.9e-32
Identity = 96/305 (31.48%), Postives = 162/305 (53.11%), Query Frame = 0


Query: 20  FNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAI 79
           F +  S+  +  L +   FA PLP          +  SS  + S+   VQ L    +AAI
Sbjct: 38  FRWRKSRPFAPRLAQPDNFAPPLP----------LIRSSTSLLSSKDFVQMLAR--KAAI 97

Query: 80  LVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQRIVEDSDQDGKQSSPLNDFLESNS 139
           L+  +   +G  S  PA A     V  +A    ED+++ E               LE+  
Sbjct: 98  LLVGSFVFLGFCSSKPALALPTATVVSQAEL--EDEKMFE-------------KLLENEP 157

Query: 140 EAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVF 199
           E +EA+K+++ +K+  G++E+A+K +++L+  +P   EWK L A     MG+   A+ ++
Sbjct: 158 ENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLY 217

Query: 200 EEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQI 259
           ++IL   PL   AL   A++M +  +  +V   L EA+ +A   N+  E R++++++ Q+
Sbjct: 218 KDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQM 277

Query: 260 QFLQKNVEEALKSYKELVKEDPTDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFE 319
             ++   EE LK ++++V ++P DFRPY CQG++YSL+DK  EA QQF  Y  L P +F 
Sbjct: 278 HIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFP 314

Query: 320 VDGYL 325
             G+L
Sbjct: 338 QKGFL 314

[Close]

BLAST of CaUC01G008000 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.4e-30
Identity = 100/296 (33.78%), Postives = 159/296 (53.72%), Query Frame = 0


Query: 54  VRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHL------PARAESPGAVAEE 113
           +RASS    S++P    L+      + +  AA ++    HL       A   SP      
Sbjct: 43  IRASSF---SSNPKPSFLKT---TCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPST 102

Query: 114 ASRIEEDQRIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQ 173
           A+ +  DQ  +    ++ ++ + L   L  N   VEAL+SL++ K +    + AL+IL +
Sbjct: 103 AADLTSDQ--ISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNR 162

Query: 174 LVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGE 233
           L+  QP   EW+ L A++    G  ++A   FEE+L+ +P   EA   + L+M    E E
Sbjct: 163 LIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESE 222

Query: 234 AVL----RRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPTD 293
           + L     R+ EA+   + EN KK+ RD  L++AQI+ ++ N  EAL+ Y+ELVK++P D
Sbjct: 223 SKLSEIESRINEAIEKCKKEN-KKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKD 282

Query: 294 FRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 339
           FRPY CQG+IY+L+ K  EA +QFA++R L P+      YL    L+  K+F  ++
Sbjct: 283 FRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

The following BLAST results are available for this feature:

BLAST of CaUC01G008000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876236.1	9.8e-167	93.81	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022146470.1	2.9e-158	90.91	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]
XP_008466719.1	4.1e-157	89.50	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo]	[more]
TYJ97188.1	1.2e-156	89.21	protein SLOW GREEN 1 [Cucumis melo var. makuwa]	[more]
XP_004149472.1	1.6e-156	88.70	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical...	[more]

BLAST of CaUC01G008000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	5.5e-96	60.73	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
O06917	2.6e-05	26.11	TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain AT...	[more]
Q3UV71	3.4e-05	22.83	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2	[more]

BLAST of CaUC01G008000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB6	1.4e-158	90.91	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110156...	[more]
A0A1S3CRV7	2.0e-157	89.50	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4...	[more]
A0A5D3BG83	5.8e-157	89.21	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174...	[more]
A0A6J1GYL7	5.3e-150	88.20	protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145845...	[more]
A0A6J1JQU3	1.3e-148	87.94	protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 ...	[more]

BLAST of CaUC01G008000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18420.1	3.9e-97	60.73	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	2.1e-34	37.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	1.5e-32	31.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	9.9e-32	31.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	5.4e-30	33.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 223..250
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..133
None	No IPR available	PANTHER	PTHR26312:SF138	PROTEIN SLOW GREEN 1, CHLOROPLASTIC	coord: 90..338
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 90..338
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 250..283 e-value: 1.2 score: 18.1 coord: 176..209 e-value: 46.0 score: 9.1 coord: 284..317 e-value: 120.0 score: 5.6 coord: 142..175 e-value: 310.0 score: 1.8
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 180..208 e-value: 0.11 score: 13.1 coord: 251..282 e-value: 0.011 score: 16.3
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 250..283 score: 8.0539
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 116..326 e-value: 5.7E-25 score: 90.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 136..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G008000.1	CaUC01G008000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding