CaUC01G006720 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G006720
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr01: 7388962 .. 7389678 (-)
RNA-Seq Expression	CaUC01G006720
Synteny	CaUC01G006720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTAGTCAAATTTTAGGATATTCTTGAAACTTCTGTAGTCAAAATTATTTTTATGTTAGAAGAATACAATAAATTATATTTAAGCAAATTAATTTATTTGGAGAATGAAAACATTTTTAATTTTTTATAACTATTATATTTGGTCCATAGGTATTAAAAATTGGGGTGCAGTTTTGGGGGCTTTGCCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCCATTCCTTGCAATAAATTCACCATTTGCACAGCCAAGCCACTTCTTTCAGTTTCGTCTTCCATTTCCATTTCATCTCGTTCCAAGCTCACAAGAAGAAAAAATCACTTGCGCATCAAAATTCTCAAAACCCTAACTAAACCTCCCCCCTTCACTATCTCTCCCATTCCCCTTCAAAGCGAATCTTCAACTCCGATCGTATCTCCGGAAATCTCAGGTCCTTCCGGCGTCGAGACCGAGGTTTTATTTCCGGCGGAATCTTGCCCTTCCTCCACAGCCACGGACGGCGAATCTCGACTCTACGGGAGCTCGAACGCTGCCTCGTTGTTTAATTTTGACGTTGCCAATTTTTTTTGGTGGTGGGGGGAATTACAAACTCCAAATTGGAATGAATACAAGCCCCACTTGAGAATGAAACATCTTTGGCAAAATTTCAAAGAAAATGAAAGGCCTATAGTTGGTTTGATACATTCAATTTGA

mRNA sequence

ATGACCAAGCCACTTCTTTCAGTTTCGTCTTCCATTTCCATTTCATCTCGTTCCAAGCTCACAAGAAGAAAAAATCACTTGCGCATCAAAATTCTCAAAACCCTAACTAAACCTCCCCCCTTCACTATCTCTCCCATTCCCCTTCAAAGCGAATCTTCAACTCCGATCGTATCTCCGGAAATCTCAGGTCCTTCCGGCGTCGAGACCGAGGTTTTATTTCCGGCGGAATCTTGCCCTTCCTCCACAGCCACGGACGGCGAATCTCGACTCTACGGGAGCTCGAACGCTGCCTCGTTGTTTAATTTTGACGTTGCCAATTTTTTTTGGTGGTGGGGGGAATTACAAACTCCAAATTGGAATGAATACAAGCCCCACTTGAGAATGAAACATCTTTGGCAAAATTTCAAAGAAAATGAAAGGCCTATAGTTGGTTTGATACATTCAATTTGA

Coding sequence (CDS)

ATGACCAAGCCACTTCTTTCAGTTTCGTCTTCCATTTCCATTTCATCTCGTTCCAAGCTCACAAGAAGAAAAAATCACTTGCGCATCAAAATTCTCAAAACCCTAACTAAACCTCCCCCCTTCACTATCTCTCCCATTCCCCTTCAAAGCGAATCTTCAACTCCGATCGTATCTCCGGAAATCTCAGGTCCTTCCGGCGTCGAGACCGAGGTTTTATTTCCGGCGGAATCTTGCCCTTCCTCCACAGCCACGGACGGCGAATCTCGACTCTACGGGAGCTCGAACGCTGCCTCGTTGTTTAATTTTGACGTTGCCAATTTTTTTTGGTGGTGGGGGGAATTACAAACTCCAAATTGGAATGAATACAAGCCCCACTTGAGAATGAAACATCTTTGGCAAAATTTCAAAGAAAATGAAAGGCCTATAGTTGGTTTGATACATTCAATTTGA

Protein sequence

MTKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEISGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANFFWWWGELQTPNWNEYKPHLRMKHLWQNFKENERPIVGLIHSI

Homology

[Close]

BLAST of CaUC01G006720 vs. NCBI nr
Match: XP_038875865.1 (uncharacterized protein LOC120068224 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 94/107 (87.85%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 3   KPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEIS 62
           KPLLSVSSSISISSRSKL RRKNHLRIKILKTLTKPPPFT+SPIP +SESSTPIV PEIS
Sbjct: 24  KPLLSVSSSISISSRSKLPRRKNHLRIKILKTLTKPPPFTVSPIPPESESSTPIVLPEIS 83

Query: 63  GPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANFFW 110
           GPSGVETEVL PAESCPSSTATDGESRL  SS+ ASL NFDVA F W
Sbjct: 84  GPSGVETEVLSPAESCPSSTATDGESRLSESSDTASLLNFDVAKFSW 130

[Close]

BLAST of CaUC01G006720 vs. NCBI nr
Match: XP_023549379.1 (uncharacterized protein LOC111807740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.5 bits (415), Expect = 7.2e-37
Identity = 89/106 (83.96%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKPPPFT+SPIP   +S TPIVSPEI
Sbjct: 23  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPPPFTVSPIPPLIDSETPIVSPEI 82

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SGP+GVETEVL PAE CPSST TDGESRL  SS+ ASL NFDVANF
Sbjct: 83  SGPAGVETEVLSPAECCPSSTTTDGESRLSESSDTASLLNFDVANF 128

[Close]

BLAST of CaUC01G006720 vs. NCBI nr
Match: KAG7013639.1 (hypothetical protein SDJN02_23806, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-36
Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKP PFT+SPIP Q +S TPIVSPEI
Sbjct: 57  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPLPFTVSPIPPQIDSETPIVSPEI 116

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SGP+GVETEVL P E CPSST TDGESRL  SS+ ASL+NFDVANF
Sbjct: 117 SGPAGVETEVLSPVECCPSSTTTDGESRLSESSDTASLYNFDVANF 162

[Close]

BLAST of CaUC01G006720 vs. NCBI nr
Match: XP_022959462.1 (uncharacterized protein LOC111460428 [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 87/106 (82.08%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKP  FT+SPIP Q +S TPIVSPEI
Sbjct: 23  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPLTFTVSPIPPQIDSETPIVSPEI 82

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SGP+GVETEVL P E CPSST+TDGESRL  SS+ ASL+NFDVANF
Sbjct: 83  SGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASLYNFDVANF 128

[Close]

BLAST of CaUC01G006720 vs. NCBI nr
Match: XP_023006301.1 (uncharacterized protein LOC111499077 [Cucurbita maxima])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 87/106 (82.08%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKPPPFT+SPIP Q +S TPIV PEI
Sbjct: 23  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPPPFTVSPIPPQIDSETPIVLPEI 82

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SG +GVETEVL P E CPSST TDGESRL  SS+ ASL NFDVANF
Sbjct: 83  SGSAGVETEVLSPVECCPSSTTTDGESRLSESSDTASLLNFDVANF 128

[Close]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL
Match: A0A6J1KXF0 (uncharacterized protein LOC111499077 OS=Cucurbita maxima OX=3661 GN=LOC111499077 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 87/106 (82.08%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKPPPFT+SPIP Q +S TPIV PEI
Sbjct: 23  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPPPFTVSPIPPQIDSETPIVLPEI 82

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SG +GVETEVL P E CPSST TDGESRL  SS+ ASL NFDVANF
Sbjct: 83  SGSAGVETEVLSPVECCPSSTTTDGESRLSESSDTASLLNFDVANF 128

[Close]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL
Match: A0A6J1H4L2 (uncharacterized protein LOC111460428 OS=Cucurbita moschata OX=3662 GN=LOC111460428 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 87/106 (82.08%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEI 61
           TKPLLSVS+SISISSRS+LTRRKNHLRIKILKTLTKP  FT+SPIP Q +S TPIVSPEI
Sbjct: 23  TKPLLSVSASISISSRSRLTRRKNHLRIKILKTLTKPLTFTVSPIPPQIDSETPIVSPEI 82

Query: 62  SGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANF 108
           SGP+GVETEVL P E CPSST+TDGESRL  SS+ ASL+NFDVANF
Sbjct: 83  SGPAGVETEVLSPVECCPSSTSTDGESRLSESSDTASLYNFDVANF 128

[Close]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL
Match: A0A0A0KCV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G306300 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.5e-32
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 3   KPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEIS 62
           KPLLSVSSSISISSRSKL  RKNHLRIKILKTL +PPPF++SPIP +++  TPIVSP  S
Sbjct: 24  KPLLSVSSSISISSRSKLRTRKNHLRIKILKTLNRPPPFSLSPIPPETQPPTPIVSPGTS 83

Query: 63  GPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANFFW 110
           GP  VETEVL PAESCPSS  TDGESRL  SSN ASLFNFDVA F W
Sbjct: 84  GPVDVETEVLSPAESCPSS--TDGESRLSESSNIASLFNFDVAKFSW 128

[Close]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL
Match: A0A1S3C7D7 (uncharacterized protein LOC103497853 OS=Cucumis melo OX=3656 GN=LOC103497853 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.5e-32
Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 3   KPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQSESSTPIVSPEIS 62
           KPLLSVSSSISISSRSKL  RKNHLRIKILKTLT+PPPF++SPIP +++S  PIVSP  S
Sbjct: 24  KPLLSVSSSISISSRSKLRTRKNHLRIKILKTLTRPPPFSLSPIPPETQSPIPIVSPGTS 83

Query: 63  GPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANFFW 110
           GP  VETEVL PAESCPSS  TDGESRL  SS+ ASLFNFDVA F W
Sbjct: 84  GPVDVETEVLSPAESCPSS--TDGESRLSESSSTASLFNFDVAKFSW 128

[Close]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL
Match: A0A6J1CBL8 (uncharacterized protein LOC111009728 OS=Momordica charantia OX=3673 GN=LOC111009728 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28
Identity = 79/111 (71.17%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 2   TKPLLSVSSSISISSRSKLTRRKNHLRIKILKTLTKPPPFTISPIPLQ---SESSTPIVS 61
           TKPLL VS+SIS SS SKLTRRKNHLRIKILKTLTKP PFT++PI      ++S+  I S
Sbjct: 23  TKPLLLVSASISPSSPSKLTRRKNHLRIKILKTLTKPSPFTVTPILPNLPPTDSALQIES 82

Query: 62  PEISGPSGVETEVLFPAESCPSSTATDGESRLYGSSNAASLFNFDVANFFW 110
            EISGP+GVETEV  PAE CPSST  DGESRL   SN ASL NFDVANF W
Sbjct: 83  SEISGPAGVETEVSSPAECCPSSTTVDGESRLSEGSNTASLLNFDVANFSW 133

The following BLAST results are available for this feature:

BLAST of CaUC01G006720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875865.1	3.4e-39	87.85	uncharacterized protein LOC120068224 [Benincasa hispida]	[more]
XP_023549379.1	7.2e-37	83.96	uncharacterized protein LOC111807740 [Cucurbita pepo subsp. pepo]	[more]
KAG7013639.1	2.1e-36	83.02	hypothetical protein SDJN02_23806, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022959462.1	1.4e-35	82.08	uncharacterized protein LOC111460428 [Cucurbita moschata]	[more]
XP_023006301.1	1.4e-35	82.08	uncharacterized protein LOC111499077 [Cucurbita maxima]	[more]

BLAST of CaUC01G006720 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC01G006720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXF0	6.5e-36	82.08	uncharacterized protein LOC111499077 OS=Cucurbita maxima OX=3661 GN=LOC111499077...	[more]
A0A6J1H4L2	6.5e-36	82.08	uncharacterized protein LOC111460428 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A0A0KCV3	7.5e-32	77.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G306300 PE=4 SV=1	[more]
A0A1S3C7D7	7.5e-32	77.57	uncharacterized protein LOC103497853 OS=Cucumis melo OX=3656 GN=LOC103497853 PE=...	[more]
A0A6J1CBL8	2.9e-28	71.17	uncharacterized protein LOC111009728 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of CaUC01G006720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G006720.1	CaUC01G006720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane