CaUC01G006540 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G006540
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 7162773 .. 7164419 (-)
RNA-Seq ExpressionCaUC01G006540
SyntenyCaUC01G006540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACATAATACATCTTATATTTTTTAAAAAATTAATTGAATTTAAAACATGATTATATTTTTAAATTTTTTATTTTTATTTAACATAATTTTATATTTTAAAATTTAAAATTCAAAATCTGTAGGGTGAAAATATATAAAAGTTGTTTTTAGAATTTACTCTACAAAATTTGAAAACGATTTTAAAAATAGAATTCGAGTTTTCTATGAAAACATAAACCAAAATTCTTTACCAAATAACCCTTATTTTTTTTCATTTTAATTTGAAGCATTTTTCTTTTTAAAATAAAACCTACAACCAAATCTTCATCTTCTTCTCTTCCCCTCCCTCTCATTGTTGTGAAAAGAGGCCAGCCGCAGCTCCTCCCCTTTTCGTTTCAGTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGAGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAGTTTTGGTAACTACCCATTCTATTTCCACCAAATATTTGAGTTACTCACTTCTTAACTGCTTAAATAGGTAGGATTAAGCGTATTCGGACATGTTTCCGTTAGGATTCAAGTCCATTTGGATAAGTTTCAGTGGGTAGAACACTCTAAATATCCTTTCTAACTACTTTAAGGTTCTTTTAAGTTTGTCTCTAATATTTGTAATACTTGAAAGCTCGTATTTGTAGATCTGGAGTATTTTTGGAACTATCTGAACACTTTTTAGTGAGGACCCAAGATGTTTTTGTGAGTTTTAGCCATTAGAACTCTATTTAGATCCTTTTGGAATTAAATTAAAGTGCCGTAAATTAGTTTATAACTTTGGATATTCTCTATTTCTAGTTTAGACTCAGATTTGAGGCGTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGGTAAGTGGAATTCTACTTGAAGAGTTTGTTTGTTGATTGATAACACCTCGGGCGTTTTGTTTGTGTCATATCCATCATTAGGGATGTAAATACTTTATGTTCTTGAATTATGTGTTTTGAATGTTTAAGCATATTGTAATGTTGAGTTAATATTCCTATGCTTAAGAGTGTGTTATGTTGCGATGCATATGATTTATGATGAGAGCGTTTTATTATTTTATATGATTTTGACATAGAGTATGGTTTAGAAAAGCATGTTGTAGGTCTTATGTATTCTAGCGAGTTTGTGGGCAAAAGAGTTAGAGAACCTTGTGTATTTATATAGGGAAGACGTGTGAATATTAGTTTGCCTCGAATAAAAATGATCAATGGATGATGATATTTCACTATTGGCTTGAGAGAGGGATTAAAAATCATCATGTGTTTGTGTGATTAATGCTTTAAATCTTCTAGCCAAAGATTAATTGTTTGCTTGATTTAAATTAGGTTAGGATTCGTATGCATGACTATTTGTAGATTCTTACACAAATTCTTTGATAAAAACTTGGGTTTATTGAAAGCTATTCCAATACTTTTGAATTTTTTTTTCTACTGTATGGTTAGAGTCGCTGCAGAAAGACGAGTAGAAGAAAGATGCACGCAATCATCTAAAACCTAA

mRNA sequence

ATGGACATTTTTCTTTTTAAAATAAAACCTACAACCAAATCTTCATCTTCTTCTCTTCCCCTCCCTCTCATTGTTGTGAAAAGAGGCCAGCCGCAGCTCCTCCCCTTTTCGTTTCAGTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGAGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAACTCAGATTTGAGGCGTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGAGTATGGTTTAGAAAAGCATGTTGTAGGTCTTATGTATTCTAGCGAAGTCGCTGCAGAAAGACGAGTAGAAGAAAGATGCACGCAATCATCTAAAACCTAA

Coding sequence (CDS)

ATGGACATTTTTCTTTTTAAAATAAAACCTACAACCAAATCTTCATCTTCTTCTCTTCCCCTCCCTCTCATTGTTGTGAAAAGAGGCCAGCCGCAGCTCCTCCCCTTTTCGTTTCAGTCCCGGCACGGCCACCTAGCACAGAAACCCACAACGCCTTTCCTTTCCGGAGACGAGCACCTCCGATTTTGCGACCCACACGAATCTGGCGAGTTAAAGCGTGCGAATCCTTTGCTCGAACTCAGATTTGAGGCGTTCGGACTAAGGTTGAAGGTTGCTTTGGGTATGAATTATGATTACTCATTTTCGAGCACTTTTGAGACTCTGAATCAAGTTCTAGAGTATGGTTTAGAAAAGCATGTTGTAGGTCTTATGTATTCTAGCGAAGTCGCTGCAGAAAGACGAGTAGAAGAAAGATGCACGCAATCATCTAAAACCTAA

Protein sequence

MDIFLFKIKPTTKSSSSSLPLPLIVVKRGQPQLLPFSFQSRHGHLAQKPTTPFLSGDEHLRFCDPHESGELKRANPLLELRFEAFGLRLKVALGMNYDYSFSSTFETLNQVLEYGLEKHVVGLMYSSEVAAERRVEERCTQSSKT
Homology
The following BLAST results are available for this feature:
BLAST of CaUC01G006540 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G006540 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G006540 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC01G006540 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G006540.1CaUC01G006540.1mRNA