CaUC01G006250 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA ATGGATATTATTTCAACCCCATCAGCTCAAAGCTTGAGAAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTGGTAGTACTGGTCCCACAAGATCAAGGAGCTTTCGGCTCGGTCGGGTGTGGCGGATGAGACGACAAGTAGCTCCGAAACTACGGTTGAAAGCGTCGTCGCCGTTGAAAGTTCTAGCGAAGATTCACGACGGGTATGTCGAAATGATGATGAGGTTGGCCAACAGTGTGGGGAATATGTATGCCATTGGAGCCTTTGGAAATAGGAAGAGGATACCTAAACCTAAAAATCAAGTTCCTCTTGTTTCTTGTGGTGGGGAACAAGTTGATGCTAAATTGGTCTTGGAAATCTATAACAAACTTGCTGCTTCCAAGAACAACTCAACTACTGCTGCTCCTAATTTTTGA MDIISTPSAQSLRRLWRRRRYQRLGSGSTGPTRSRSFRLGRVWRMRRQVAPKLRLKASSPLKVLAKIHDGYVEMMMRLANSVGNMYAIGAFGNRKRIPKPKNQVPLVSCGGEQVDAKLVLEIYNKLAASKNNSTTAAPNF Homology
BLAST of CaUC01G006250 vs. NCBI nr
Match: XP_038874956.1 (uncharacterized protein LOC120067468 [Benincasa hispida]) HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57 Identity = 120/138 (86.96%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of CaUC01G006250 vs. NCBI nr
Match: KAG7016737.1 (hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50 Identity = 107/131 (81.68%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of CaUC01G006250 vs. NCBI nr
Match: KAG6579224.1 (hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.6 bits (527), Expect = 6.9e-50 Identity = 106/131 (80.92%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CaUC01G006250 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 5.9e-49 Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CaUC01G006250 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima]) HSP 1 Score: 204.5 bits (519), Expect = 5.9e-49 Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of CaUC01G006250 vs. ExPASy TrEMBL
Match: A0A6J1JZV2 (uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49 Identity = 106/136 (77.94%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of CaUC01G006250 vs. ExPASy TrEMBL
Match: A0A6J1FGC7 (uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC111445168 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49 Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CaUC01G006250 vs. ExPASy TrEMBL
Match: A0A0A0KV01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576730 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 6.3e-49 Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 0
BLAST of CaUC01G006250 vs. ExPASy TrEMBL
Match: A0A5D3BKB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00020 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48 Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of CaUC01G006250 vs. ExPASy TrEMBL
Match: A0A1S3CSX3 (uncharacterized protein LOC103504591 OS=Cucumis melo OX=3656 GN=LOC103504591 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48 Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of CaUC01G006250 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 8.3e-09 Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 0
BLAST of CaUC01G006250 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of CaUC01G006250 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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