CaUC01G006170 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G006170
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Nicotinamide adenine dinucleotide transporter 2
Location	Ciama_Chr01: 6712752 .. 6714489 (-)
RNA-Seq Expression	CaUC01G006170
Synteny	CaUC01G006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAAAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGACCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGCGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGGTACTCGCCGGAATCCCCGAGTAATGGATGATCATTTTAAAAATATTTTTAACCCTTTCTATAATTAATTAAAAAAATAAATATATATATCTGATCTAATATTTCTCTGTTCTTTTTAGTATAGTTTTTAATTTTTACTTGAAATAGGGGTGGGGGAAGGATTATGATCTTAATCAAGGGGGTTTAGGGAAATAATTTGTTATATGGAAATTATGAATAGATTTCCCATGAGTTGGAATTTGCTTATTTTCTGTCAAATTTTACTTTGTGATTAGCTTTATTATTTGTTTAACTTTTCTTTCTTTGAATTTTCAAATCATATATTAATTAGTCAAATTAATTCTATACAATTTGTAGTTCTGGTCCATGTTACAACAAAATCAGCACCAAATTTAAAGCTTAAACCTTGATTTTCTTTAATTGTGTTATTTTAATTTATAAAATTTTGTTCTTAAATTTGTATGGTTAAGTTAAGAGTTAACAAGTCCTTCCTAAACAAATCTTTGACCCCACTTTGACCATAGTCAAGATTAGTCAGTTAAATTTGAGTTAACAAATATACTAATGGCCTATCTCAATTATTGTTTTCAGTTGATAGAAGTCCCAAAATTTGATTGTAGTCCAAATTGATTAAATTATTGATTTGAGTGTGACATGCAAATATGAAAATCAGCCAGAGATGGACATAGGAATATACTTCTTTCTTATATATATATATATTTTATAGATTCTTGCCTGCAATGGTTAAGAGTAGTGGTCTACATGTGACTTGGATTTTTCATTTGTGGAGGGACCTATTTTTTCCCTTTATTCCATGGAGGGATCTTTTTAAGACTTAAAAACTCAATTTTACATTGACAAATGCTTGAGTGCATACGATGTCAAATAATAGTTGTCCCGTTGTCATGTGGCAAAATTTTTTTCTTATTTTATTTTTTGGACTGCATAAAGATAGTTACAGCTCAAGATGCACCAAGTATTATTCTTCTATTATTTACTGGACTTCCAAACCCATAAATTTGACACCTTTCTCATTATGTTTTGATTATAGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTTGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCAGTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGAACCCTCGCATGGGGTACCATGGGTGTTATGTGGACTAA

mRNA sequence

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAAAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGACCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGCGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTTGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCAGTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGAACCCTCGCATGGGGTACCATGGGTGTTATGTGGACTAA

Coding sequence (CDS)

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAAAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGACCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGCGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGAAAATGACAACAAATGCTTGTATATATACTTTTTGGCCAGTTTGTTGTACATGTGGGACACTCACTGGCCTCTCGTTGGGACACTCACTGACCTCTCGTATGCATTGTTGCGTGCGTGTCCCATGTGTTCGCTCGCGCCCACCCAATGCCTCCAGTCGTATGCACGCCCATTCTACACCCTTTGCACACAAGCACGAGCGTTGGTGGGTATGCATGAACCCTCGCATGGGGTACCATGGGTGTTATGTGGACTAA

Protein sequence

MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPKMTTNACIYTFWPVCCTCGTLTGLSLGHSLTSRMHCCVRVPCVRSRPPNASSRMHAHSTPFAHKHERWWVCMNPRMGYHGCYVD

Homology

[Close]

BLAST of CaUC01G006170 vs. NCBI nr
Match: XP_038875200.1 (uncharacterized protein LOC120067717 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 5.8e-70
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP RRALPEK
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPHRRALPEK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGW 120
           KRDDHK+ SRSNTLKDLFVSSPPYV TDGD+HET VAAPTR+ T VCKEKE GEVGSAGW
Sbjct: 61  KRDDHKELSRSNTLKDLFVSSPPYVATDGDIHETAVAAPTRDATTVCKEKEDGEVGSAGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           NPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 NPGSPRPGWTGFRYKYLLRKTWRP 144

[Close]

BLAST of CaUC01G006170 vs. NCBI nr
Match: XP_011655483.1 (uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical protein Csa_008562 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 4.3e-65
Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V APTRNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 145
           GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 146

[Close]

BLAST of CaUC01G006170 vs. NCBI nr
Match: KAG7032525.1 (hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 4.7e-64
Identity = 124/144 (86.11%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 143

[Close]

BLAST of CaUC01G006170 vs. NCBI nr
Match: XP_008467191.1 (PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncharacterized protein E5676_scaffold1728G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 6.2e-64
Identity = 134/148 (90.54%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V APT+N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of CaUC01G006170 vs. NCBI nr
Match: KAG6601820.1 (hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.1 bits (645), Expect = 2.3e-63
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRR ALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRSALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 143

[Close]

BLAST of CaUC01G006170 vs. ExPASy TrEMBL
Match: A0A0A0KPK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.1e-65
Identity = 131/146 (89.73%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V APTRNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 145
           GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRP 146

[Close]

BLAST of CaUC01G006170 vs. ExPASy TrEMBL
Match: A0A5D3BMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00090 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.0e-64
Identity = 134/148 (90.54%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V APT+N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of CaUC01G006170 vs. ExPASy TrEMBL
Match: A0A1S3CSY3 (uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.0e-64
Identity = 134/148 (90.54%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V APT+N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRP 145
           S GWNPGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRP 148

[Close]

BLAST of CaUC01G006170 vs. ExPASy TrEMBL
Match: A0A6J1HGM7 (uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC111463373 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.3e-63
Identity = 122/148 (82.43%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G   W
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTSW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
           +PGSPRPGWTGFR+KYLLRKTWRP + +
Sbjct: 121 HPGSPRPGWTGFRHKYLLRKTWRPLLAS 147

[Close]

BLAST of CaUC01G006170 vs. ExPASy TrEMBL
Match: A0A6J1I9M9 (uncharacterized protein LOC111470493 OS=Cucurbita maxima OX=3661 GN=LOC111470493 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.5e-60
Identity = 120/144 (83.33%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS     RRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSA----RRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRP 145
           +PGSPRPGWTGFRYKYLLRKTWRP
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRP 139

[Close]

BLAST of CaUC01G006170 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 61/151 (40.40%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 1   MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRAL 60
           MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+      SP RR  
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQLRRKKTTLKMLLS----LASPSRREQ 60

Query: 61  PEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPTRNVTPVCKEKEYGEVGS 120
                  HKD +    LKDLFVSS      +    +      T+         +      
Sbjct: 61  QPLIHHHHKDVA-GRKLKDLFVSSSS--AEEEQEEDERPKGKTKEEVLAAMAAKLNAASR 120

Query: 121 AGWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
                    P W GF  K LL++ WRPK+ T
Sbjct: 121 LQCESADAAPVWFGFS-KRLLQRAWRPKLGT 143

[Close]

BLAST of CaUC01G006170 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 6.9e-13
Identity = 70/159 (44.03%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 3   SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRALPE 62
           SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLTR+S R R P  +  + E
Sbjct: 2   SLQKFKLLATHCSTVAESPT----RSPVIHLRRRK-TLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  KKRDDHKDFSRSN-TLKDLFVSSPPYV----GTDGDVHETTVAAPTRN--VTPVCKEKEY 122
            K+ D +   RS+  L DLFVSSPP+     G  GD          R+  V  V     +
Sbjct: 62  SKKTDKRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMERDVPVNGVSNNAGF 121

Query: 123 GEVGSA---GWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
           GE  +A   G+N GS RP  +      LLR++WRP + T
Sbjct: 122 GEEITARRVGFN-GSVRPMSSVTLRCRLLRRSWRPVLVT 154

[Close]

BLAST of CaUC01G006170 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 62/173 (35.84%), Postives = 83/173 (47.98%), Query Frame = 0


Query: 1   MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRR 60
           ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  RR   R+
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRRK-TLRMLFDKSSDSRRRNLRQ 62

Query: 61  ALPE----------KKRDDHKDFSRSNTLKDLFVS--SPPYVG---TDGDVHETTVAAPT 120
            L E          KKR +H+   R   L++L V+  SPPY G    DG   E +  +P 
Sbjct: 63  ILEESPESDGNSGNKKRGNHRATRRK--LRELLVTSPSPPYKGREDIDGIGEERSEISPL 122

Query: 121 RNVTPVCKEKE-----YGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPKMTT 149
            NVT     +E     +G  GS              FR + +LRK WRP + +
Sbjct: 123 -NVTSNGDGRELTARRFGSSGSV-----------QSFRLR-ILRKPWRPVLVS 159

The following BLAST results are available for this feature:

BLAST of CaUC01G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875200.1	5.8e-70	93.06	uncharacterized protein LOC120067717 [Benincasa hispida]	[more]
XP_011655483.1	4.3e-65	89.73	uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical ...	[more]
KAG7032525.1	4.7e-64	86.11	hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008467191.1	6.2e-64	90.54	PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo] >TYK00268.1 uncha...	[more]
KAG6601820.1	2.3e-63	85.42	hypothetical protein SDJN03_07053, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CaUC01G006170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC01G006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPK6	2.1e-65	89.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1	[more]
A0A5D3BMD8	3.0e-64	90.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CSY3	3.0e-64	90.54	uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=...	[more]
A0A6J1HGM7	3.3e-63	82.43	uncharacterized protein LOC111463373 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1I9M9	1.5e-60	83.33	uncharacterized protein LOC111470493 OS=Cucurbita maxima OX=3661 GN=LOC111470493...	[more]

BLAST of CaUC01G006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68430.1	1.4e-13	40.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G66890.1	6.9e-13	44.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	2.5e-07	35.84	50S ribosomal protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..68
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..148
None	No IPR available	PANTHER	PTHR34542:SF1	OS08G0359900 PROTEIN	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G006170.1	CaUC01G006170.1	mRNA