CaUC01G005360 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGTATTGTGTTCACTTTAAAATTTTGTCTGATCTTTTGAAATTTTCATTCTGTAATGCTGTGAGCCTTTGTGATAAATCCTAGAAGATGAAAATTATAGTTTGTATTTCTTTTGAAGAAAAAATCCTAATTTTGGTAGTTATTGTTATTGTGCCATTATGGTTTTGAATCTTATAAATTTTGATAGAGTTGGTGTTCTAATCAAAGATTTGCAAATCATTCTTGTGTCCAGAGGGTGTGGAGATATGTCTGTGTTGGGTTAGTTTTCTTGGATTGGTTAAAAGATGTTTTAATCCAATCATCTTAGGTGATGTGATGTAATTTAATCTAATTATGGTGTTTTTTTTTAATGTCAGGTTGTTTGACTTAAAAGTCATTTTTATTTAAACTTTTGATAAAAACTGTTTATTGGAAATAATTTTGAGTGGTTGTGAAATATTTTAATTTTTTTTAATGACTTGTTTTTAAAATTAAACACTTGAAAAGTTAAATCAAATATTCTCTTGGTTATTGAGGTTTGGATGGTTTAAGTGTTGGTATAATAGGTCAGAGTAGTAAATAAATCAATCAATTGTGGTTAGTTTTTCCTTTTCTTTTTTTTTTTTTTTCCTCAAAATTTGATAGTTTTAGGAGTTTATTCGAATATATTTGTAAGTATATAAAAAATAAATAGAAGCACTGTAAGAATCTATCCAGAGCTCTTTAATGTCGTATGGGATCTACCTATTCGTATAATCTTCTAAATCTATAATTTAAACCTTCAAGGAAATTTTGATTAAATAATTTGAAACGATGATGTTTTTGTTCACTTCCCATTCATCAATTTCTCCATTGTTTGTCATATTAGCCACATAGGTATCCTTGAAATATAATAAAATAATATATTGCTTAGCTCCCATTAGCCACATAGGTATTATGTTTTTAAGTTTTGATTACAAAACTTGACTTGAATTTTGAAAACATTCTTAAAGTCTAGACTAAAATAAGTTAATTAATTTAAAATTAATAAGAGAAGGTAATGTTTGATTTTTCTGTTTTAAAAAATTAAACTTATAAACAGTACTTTCATCCATAATTTTCTATGTTTTATTATCTACATCTATCAATGTTTTTAAAAATTAAGCCAAATTTTAAAAGCTAAAAAAAACAATAATAATAAATTTAATAACGTTGTTTTTTTATTTTTTGAAATTTGACTAAGAATTCAAGTGTTTTTTTTAGCGAATCATAAATTGAAAAATTAAGAGGAAAAAAAATAGAATTTTAAAAAATAAAATCTTTATCAAAAGGCATAATAATATCGAACATCTAAATTTGAAATCCCCATATGAATAGTGGTAGTAATTTCACATAATACACAGCATCTAAATTTGAATTCCAATAATTATTAAAATCCTCAGCACATGATAATCTTTGAGTTGACTTTAAAAAACCATTGAAGTTGCTTTCACAACACAAAAGTGTCTGCTTCCACAACAAAAAGCTTCTTCACTACACTTTCCACATTACCAAACCCTTTAAATACCCAAAAACCTTCACACTTCCCATTCATTCTTCTCTCTTCAATTCCAATTTCCAAGTAGAAGCTTACAAGCCAATTTCCACTGCAGCCATGGCTAATTCCATTATGGAAGTTGCTGCTGAGGCAGATTCCAGCACTCTGTTCATCTTCTGCTTCTTCAATTTGATCATACTCATCATTCTCTTCACCTCAAAACCAGTCTCCTCCTCCTCCAGTTTTGATCAACAAAACGATTATGATATGCCACTTTCAATTGTCATTCACAGCAACACAAATACAACAGAACAAAATTTCATGCTTCAGAAGAATCCCACAGTTGATGTGTGTGAAGTGACAGAGATTCAAAATGAACCGGAGAGATGCATGAAATTCAACTTCAACGATAATGTTGAACAGAGTGATGATGATCATGATGAGGATGAGGATGAGGATGAGGATGATTTCAGACGAAGAGTGGAAGAATTTATTGAAAAGGTTAACAGAGGGTGGAGAGAAGAAAGGCAAATAACCTTGAGATCGGTCGAATAG ATGGTGGAAGCTTACAAGCCAATTTCCACTGCAGCCATGGCTAATTCCATTATGGAAGTTGCTGCTGAGGCAGATTCCAGCACTCTGTTCATCTTCTGCTTCTTCAATTTGATCATACTCATCATTCTCTTCACCTCAAAACCAGTCTCCTCCTCCTCCAGTTTTGATCAACAAAACGATTATGATATGCCACTTTCAATTGTCATTCACAGCAACACAAATACAACAGAACAAAATTTCATGCTTCAGAAGAATCCCACAGTTGATGTGTGTGAAGTGACAGAGATTCAAAATGAACCGGAGAGATGCATGAAATTCAACTTCAACGATAATGTTGAACAGAGTGATGATGATCATGATGAGGATGAGGATGAGGATGAGGATGATTTCAGACGAAGAGTGGAAGAATTTATTGAAAAGGTTAACAGAGGGTGGAGAGAAGAAAGGCAAATAACCTTGAGATCGGTCGAATAG ATGGTGGAAGCTTACAAGCCAATTTCCACTGCAGCCATGGCTAATTCCATTATGGAAGTTGCTGCTGAGGCAGATTCCAGCACTCTGTTCATCTTCTGCTTCTTCAATTTGATCATACTCATCATTCTCTTCACCTCAAAACCAGTCTCCTCCTCCTCCAGTTTTGATCAACAAAACGATTATGATATGCCACTTTCAATTGTCATTCACAGCAACACAAATACAACAGAACAAAATTTCATGCTTCAGAAGAATCCCACAGTTGATGTGTGTGAAGTGACAGAGATTCAAAATGAACCGGAGAGATGCATGAAATTCAACTTCAACGATAATGTTGAACAGAGTGATGATGATCATGATGAGGATGAGGATGAGGATGAGGATGATTTCAGACGAAGAGTGGAAGAATTTATTGAAAAGGTTAACAGAGGGTGGAGAGAAGAAAGGCAAATAACCTTGAGATCGGTCGAATAG MVEAYKPISTAAMANSIMEVAAEADSSTLFIFCFFNLIILIILFTSKPVSSSSSFDQQNDYDMPLSIVIHSNTNTTEQNFMLQKNPTVDVCEVTEIQNEPERCMKFNFNDNVEQSDDDHDEDEDEDEDDFRRRVEEFIEKVNRGWREERQITLRSVE Homology
BLAST of CaUC01G005360 vs. NCBI nr
Match: XP_031742158.1 (probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44 Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 0
BLAST of CaUC01G005360 vs. NCBI nr
Match: KAG6605668.1 (hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.9 bits (429), Expect = 1.8e-38 Identity = 106/150 (70.67%), Postives = 118/150 (78.67%), Query Frame = 0
BLAST of CaUC01G005360 vs. NCBI nr
Match: XP_024928006.1 (uncharacterized protein LOC112491100 [Ziziphus jujuba]) HSP 1 Score: 79.0 bits (193), Expect = 4.2e-11 Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CaUC01G005360 vs. NCBI nr
Match: QHO42419.1 (uncharacterized protein DS421_5g153990 [Arachis hypogaea]) HSP 1 Score: 74.7 bits (182), Expect = 7.9e-10 Identity = 62/163 (38.04%), Postives = 91/163 (55.83%), Query Frame = 0
BLAST of CaUC01G005360 vs. NCBI nr
Match: XP_020958837.1 (uncharacterized protein LOC110262661 [Arachis ipaensis] >QHO14112.1 uncharacterized protein DS421_15g521350 [Arachis hypogaea]) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09 Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = 0
BLAST of CaUC01G005360 vs. ExPASy TrEMBL
Match: A0A6P6G1P3 (uncharacterized protein LOC112491100 OS=Ziziphus jujuba OX=326968 GN=LOC112491100 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.0e-11 Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CaUC01G005360 vs. ExPASy TrEMBL
Match: A0A2N9GM45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28564 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.5e-11 Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 0
BLAST of CaUC01G005360 vs. ExPASy TrEMBL
Match: A0A6P5NPZ6 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Arachis duranensis OX=130453 GN=LOC110281203 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09 Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of CaUC01G005360 vs. ExPASy TrEMBL
Match: A0A5N6RPH7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018156 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.2e-09 Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of CaUC01G005360 vs. ExPASy TrEMBL
Match: A0A7N2QYC4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.2e-09 Identity = 59/141 (41.84%), Postives = 85/141 (60.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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