CaUC01G004810 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G004810
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr01: 5131998 .. 5135287 (+)
RNA-Seq ExpressionCaUC01G004810
SyntenyCaUC01G004810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAGCGAGACAACAAGAGAGCAGAGAGCGGTATGTGAGATAAGAAAGAGATGAAGCGAGAGAGTGAGAGTGCANAAAAAAAACTGTCCAAGGCTAATTCTTTTAGGTCTTTCTTCACAATAATTATGGTGATAATTATGATGCAGAAAATGCCAATTCAAATTAAATGTATTGAAAACGATGTTACTGTATGGATCGGAATTAAAAATCCCCCCGTTTTCATCCATTAAATAATATTTAAGTACTTGAAAAGTCTGTTTTAAATTGTCAAGTTGCAAATATTTAGTTGAGACCATAAAGAGCAAATGAGAGAGCGAGACAACAAGAGAGCAGAGAGCGGTATGTGAGATAAGAAAGAGATGAAGCGAGAGAGTGAGAGTGCAAGAGAGCATAGGGCATTCCACGTGCGTGAAAGTTTGGTTTTGATAATTTCACTTGAATTTGACGTTGACAAAGGGTAAAAAAAAACCTCATTTTCAAATAAGGGACAAATCTCATTTTTCTCTCTCAATTTGGATCATCCGCACAAATTCCCCAAGATCGTGGTGTATGGCAACCACCCAAAATGCATTAAAATGAGTTTGAAATTTTGAAGGAAACACTAAAAACTAGATTTTAAAAAACGAAGGTTAAAATACCATTTTGATCGTGTACTTTGAAATTTGTTCAATTTTAGCTCATATATTTTTAGATGTTCAATTTTAGTCCATGTACTTTCAGTAAATCTTAAGTTAATCCCTTAAAGTTAATTTTTTTTTTTTTTATCGAAATTGATTAAATAATAATAATAATTTTCATGTAAAGAAAAACAACATGAGAATATTTTTTTTCAAAATTTACAGTGAAAATGCTAGTAAAAAATAAAAAGTAATGAGAAAATCGACAATAAACTAGTAACAGATACTAAATTTAAGATTTATTGGAGATATAATAACTAAATTTGAATAATTAAAAATATAAAAACTAAAATTGAACAAACTTCATAGTATAGAAATCAAAATGATATTTTCCAAAAAATAATACTAATAATAATAATAATAATCTTTTTGTAATGTTTAAGTGGGAATCCTTCCAAATTTTGATGTTAAATAAAAATGACTAAAATATCCTCGAACTACCCTCCTCCCCATCCTTTCTCCCACATTTTGACCTAGCTTCACTTCCCCTGTTCTCTCTCTTTCTCATTTGGCCAAGAATTTCTCACTCAGATAACATATGTGGCTTCGATTTGAGGTAAGTTGTTTTCCCTAAATCTTCTTCTTCTTCCTTAAGTTAGTTTTTGCTTAGATTTAGCGTTAGATTTGGATTGTTCTTTCTCTTTCTCTGCTGCGTTTCACTTTGATTGTTTTCTGGGTTATCCAATTTGAGCACACATTTATCTTTAAATTTGATTTTGCTCTGTTGCGGTAATGTGTTGTGTTGACTGCCGATGATTGCTGAGATGAGACATTCTTGATGACATTCTCTAACATTTCAATTTCTTGGAGATGTTTTCCATGATGTACCATATCTAAATTTACAATATTGTTAAAGTCCTCTACTTTGGTCTTCAACCAATGCTTTAATTTCCTTTACTGATTGTCGGATAGGTAACTCAAGTTCAGATGATGAGAGTCCATAGGACAGTTGTTGAAAAGATGCCCAACCTGCTGAATTGTTAAGTTCCATTTTGGTCATAGGCAAGTTCTTTAGCAATATGAAGAAGCTCCCTGAATTGCCAATATCCTCTGAATGCACTTAGACTTGGACTTTGATTTTTCTTTCACCTTTCTTAATTCTTTTGTAGAAAGACTTGGTTTTGACATTTTTGGCAGTTGGAGCATTCAACATAGTTTGTAGTTGTAAATGTAGGTTTCTGTTAACCAAAGTATTAGATAAATATGTCTATCTACTTTTTTGATGATGTGAGGGTCCCCAAAAGCTCAATTTAAAGAAGGCTTCTACACTTTTTGACTCCAATCTTTACTCGTATTGCGATTTGAACTAAATATGACCACCAAATTTGGAGATGTTTGTGTACTAGAGTTCCTAATATCGATCAATTAGGAAATTTGTTTTTGTACTAGAGTTTCTAAAATTGCCAAAGTATTGCCCAATTCAAAGAAGGCTTCTACTATGCTTTTATACTTGTATTGCCAGAATATCAGTTAAATAGTTTGGAGATGTTTTAATACTAGAGTTCCTAAAATTGATCCATTTTTATTTGCTAGAAATGTCTATGAATATAGTTGCAAATAAAGATGAAACAGAAAAACAAATCAAGGCAATTTGAGATGATGTTACAACAGATTCATTTATTCAAGCTTGTGTTGTTGAAACTTTGAAAGGGAATAGACCAAATGGACATTTATAAGAGTTCAATGGCTCTCCTTAACTTTATAAGAGTTCATTCAAAAACAAATTTTGAGTTCAAGTCTTATGACGACGATGAGATTCTACGACCTTCAAATGATGAAAGAACTCATGAGGACATTTATGAAGAATATGGAGGTTCAATTTGTGAAATTGAGATGGATGAACTATGCCATCAAATTGCACAACTTCTTATGTTTAGTCAATATTGTATTGTCTTGACAAAATTATTATTACAGTATGTCTTGTTGTCCGAGATCAAGTTGTCTTTTTATGATTATTTATTTAATTTCAAGATACATGTACTCTTAAAACTGAACTGTCCAAAAATATTATATTCTAGTACAAAAGAATAATGATATTAATGTTTGGTTTTAACTTCATTAGTTTCAAGTAATGTGCAGTTAATTTCAAGATATATGTTTCTCAATGAAATTAGTTCATAGTGTTCAATAATCTTTTGTGATAATTTGACATAAGTATAAGCATTTTTGGTGTATAACAAACCAAACAAGTTTATGTTTGTGAACTCTTATGAAAAAAATGTAACTAAACACATAAGTGTTAAGATTCTAAATTTTTTTTTTCCACAGGCAATCCAAATGCACCCAAAGTCGGTCCAATGTCAAGGGAGCATGAAAACCCCCAAGCCCCCTTTGTCCAATATATAGCATCCTCAGAATCAGAGCTATGGTGATCACTATACTTGGCTCCAAATAGTTTCTTGTTATTTTGCTCCTCCAAGATCTTCATTTATCAGTCTTGTGCTTCTCTCTCCATCCTTTTCAACTGCCTTCTGAGTTCTGATTGTTTAATTCGTTGGTCTTCATTGCATATAAGGTCCTATGCTAGTCATGTCCTACCAGTGAGCTCGCCTGTTCCAACGCCATTGTGGCTCCTACCGACAATGGAATCGAAATCACTGTACGAATGA

mRNA sequence

ATGAGAGAGCGAGACAACAAGAGAGCAGAGAGCGGCAATCCAAATGCACCCAAAGTCGGTCCAATGTCAAGGGAGCATGAAAACCCCCAAGCCCCCTTTGTCCAATATATAGCATCCTCAGAATCAGAGCTATGGTCCTATGCTAGTCATGTCCTACCAGTGAGCTCGCCTGTTCCAACGCCATTGTGGCTCCTACCGACAATGGAATCGAAATCACTGTACGAATGA

Coding sequence (CDS)

ATGAGAGAGCGAGACAACAAGAGAGCAGAGAGCGGCAATCCAAATGCACCCAAAGTCGGTCCAATGTCAAGGGAGCATGAAAACCCCCAAGCCCCCTTTGTCCAATATATAGCATCCTCAGAATCAGAGCTATGGTCCTATGCTAGTCATGTCCTACCAGTGAGCTCGCCTGTTCCAACGCCATTGTGGCTCCTACCGACAATGGAATCGAAATCACTGTACGAATGA

Protein sequence

MRERDNKRAESGNPNAPKVGPMSREHENPQAPFVQYIASSESELWSYASHVLPVSSPVPTPLWLLPTMESKSLYE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G004810.1CaUC01G004810.1mRNA