CaUC01G004240 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTTAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGCAGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGGTTTCGGCCTCTTTCTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCACCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAACTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGTGAAAAGTGAAAAATGTACTTTCAATTTTGCCTGTTTCAAGTCTGCAGAGCCTCCTTTCGTTGTAATGGAGTTTTGGCTCTTTCCATACCTCTTTTATTAGCATAGTAGAGTTGTTGCTTACAGTCATGCAAGAAGATATAGCTGAGTTTCAAGTTATTATGCTCTTCTTTGATGTAACTTCTAACCTACTCCGCACGACAAGTTTATGTAATTAGTTATACATTCTTTGAAATTATACAGGCTCCATAAGGCCGCGTTGCAAGCACAAACTAAGCTCAAGAAGGATAGTTTACTAGTTGAAACAAAACTTCCGAGCTTCCACGGTATGTTAGGAAATTGAGTTTCCCTACATTTTAAGGGAAAATTGTATTGGATAGCAAATTTTGATTATATATTAGTATCTGAGTCATCAATTTTTAAAATATTGTAAATATGGCAAAATTTGTTTGAAATAATATATATTGATAAAAATCATTTTATTTGATTTTTTTCTCTTTCCAAAAACACCCTCATCTCTTCAAATGTGTAAAATCGGCTTCAACTACACGTGTTTTCTTCTTTGACAATCTGTGAGTTTCTCTACAACATCTTCAAACTCATAAGGAAGGAATTAGCTCTATGTCGCTTTTTCATTAAATTCAAACTTATTCAGAACTTTACGGGAAAAGTTACAAAGGGGCTCAACTCCTTCCCAACAAGTTTGAATTTACCAGGAATTGAGGCCTATGTGGTTTTCCTGTAAAGTTGGTCATAAAGTACAAGAGCTTTCATTCATTTCAGACAAGTTCAAAAAAGACAAAGAGCTACTTTAGGAAGGTAGTAGGAAGGAAAAGAAAGAAAAGGAAAAAAAAGGGAAAAATTGATTCTGTCAAATTTACGGGAAATTCTTATTATTAGTCGACTAAGCTGTTTTGACAAGTATATCAATCAAGTGTATATTAGTAGTGTGTCATGTGTATATCAGTAGTATATTAACTATACCAGTCAAATGCATCATTATCAAGTTTATCAATAATATGATATTAACTAATATAATGAAAATGAAGTATATCAATAGTATATTTAGAATGTTAATAGTAGAGGGTGTTTTAGACTTTTATCCTTTTAATGCTTGGGTTGGATCACAATTTCGCTAAATCTGCAAAAGGAAAAAGTTTGAAACACGCGTGCAAATTTCATTCATCTTTTGCCATACATGTAATTGCCTTTTTTTAAAAAACGTTTTTTTTCTACAATCTTTTTTACTTTTTCAGCATTTTAGTGAAGTACCCCATAATATAAAATGACGTTTTTGTCCCCATTAATTCCCTTTCAATTTTACCTCGACCTAACTTACCTAACAAAAATTTTCAGCTTCTTAACTTCAGTTTGCTTGAATTATACTCATGTTTCCATTTTGCTTTCACCAAAAAGGCACAAGTGTCTCGTTTTCACCTTGCTTATAGAGAATCTATTGGTCCCATGTTTAGGGACTTCTTTCATTTTGCAGCTTTTCCTCTATTAGAGAAAAAGGTATGAATGTTGTTTTAATTTTAAGTGGGGGAAAGGTTCTTTATTGGAAATGTTTAAATTTATTGGAATTCTTGAGAAAATAATATTTTTCAGTCAACTTTACGAAAAAAAAGGGAAAAAAATGATTCTGTCAATTTTCCCGTAAAGCTGACTAAATTTATTTATTTATTATTGTTGTTTTTTTTACATAAAGCTGGAAACTTTATGGAAATTTTGACAGAATTTTTTTTCCTTTTTTTTTTTTTTCTTTCAAGAAAACAACTATTATCCTTCAATTGATTGGAAAATATTATTTTCCCAAGAATTCCAATAAATCTAAATATTTCTTGGAAAGACCTTTTCCTCACACAAAATTAAGCAACTGCTATTTTAACTTTAAACAACATAAAACACATGAATAAAAGAGAAAAAACCAAAACAATGTCCATTCCTTCTTTTGTATAGAGAAAAAAACCAAAACAAGGTATGATAGGAAATGATGCAAAAGGAAAAAAGTCCTGAAAATTTTTGTTAAATAAGTTAGGTCGAGATAAAATTGAAGGGAATTGAATGAGAAATTAATGAGGATAAAAATGTCATTTTATATTGTGGAGGCTTCCAAAACTTTTTTTAGGTTAGAAATAACAATTTAGTGATAAAACATATGAAAAAGGAAAAGTAAGAAAAAAATTGCTGTTAACCGTAGTTTGAGTCTCACCGTCGTCCGAGGCGAAAACGAAACCCTAGCAGTGGCAAGTGCCGAGAATTCGCAGGTTTCTTCAAATCTCTCCACTTGTTTATTTTTCTATTGTTATTCATTGAGTCTTCAGTTATCACCAAACTTTAGCCCCAAAATCTTTGGAGTCACCGATCAATTTACAGAGACGGTAAAGTCGGAGCATCATACATAGTGTAGAAACAATCTTACAAAGTTCAAACATCAGCAACTCAATTACCAGAAGCGATTAGATAATGCGTCAATAGATACGATGGCGACTCTGGCAGGTCAACCAACTCACCATCAACCAACTACGGTAGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTATTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTTCGTTTGTTAGTTTTTTCTTAATTTATTTTGCAACTTTGGTGTTTAATGATGATGTTTTTAATCATAGACCCATTAGGATTTCACCAGTTTCTCAAGCTGATGACACTGTTTTATGAAACCTAGATGTGTTTAAGTGGATTTTTTAGGTCTTCTACTTTTAGGTTGGCCTTTCCAATAATTTGTCCTGAAATAATTGGTTAGTTTTCTTCGGGTGTTTGGAAGTAAATTTGGGTGTATAAAATTAGAATGTGTTTGTATTTTGCTCTATTGCTACTGAGATCTGAACTGTAGGGAGAGGAAGGGCCTCTCTTATGACCTTTCATGCCACTGATGGGGATGATTTTGATGCTTGAGAGCCGTGGTAGTGGAAACGCCAATGTTTAAAATTATAGTTATTTTATAGTTGTTATATTACAATAGCCCATACAAATGTACTTCTGATGTCTAGTTGTTGTTGTTTGTATTCTAGTATTTGAGTAAGAGCTTGTAACTTAGCTGCATTCAGAGAATAGCATTCTGTTGTTTGTTGACTATGCCATATTTCCTAATACAGGTAATATCAATTAAAATAATTCGCAACAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCCGCAGCAGAAAGAATTTTGCAGACATACAATGGGACCCAGATGCCTGGAACGGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCGGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGTGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTATTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGGTAATAAATAATGAATATGCAGTACTGCCTTTTCGTTTATTCATTTTATCCCTTTTCATGTGTTATAATATATATGATCCTTTTGGAGTGAGTGCAATCATTTTTTTATTCATCCAAGTTTCCAACCCTCCTAGCTTCTCTATTTACATGAAACCGGTTTGGTTCCTATCTGTGCTAGTACTCATAGATATGAAACTGCTGGCTTTAAAATTTGAATTTCACCTTTGTCAATGAAAGTTTTATTTTCATCATCAAACCTACAGCCAGCAGCTAATAGGTACAAATGATCATTGTGAAATTTTAGTTGATATTAGCTAAACTAGTGTTCTTGGACCTATGATGAAAACTTATCAAGTTAATTGTTATGCATATTTAATGTATTTGTCAAAATACAATTTGTCTCTTGATTAATTTTTTGGATAAATGCGTTAATCGATGTCAAAGATATTTTCTAAATGCGTTGATGGGGGAGGATATTTGCAAATTTCAAATGAAAGAGAATTCACTGTTATTAGTACTTTTCCTTCACCTATGAGAAAATCTTAGGAGGGGATGGTAATTTACTATTTTTAAACTTGTACTTATCAATGTGCCTCTTGTCTCAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAGTAAGTCAAATGTCAAGTGACAGTTTTACATCTTATGGTTTCTATGCTCAGCTCTTACTATATTGTACTCTGTGCAGATCTTTGTCGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTTCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGTGTGTTTTGCATGATTAATTTTATTGATGTAAGTTGAGTAAATTGCATCTCTGCTTGCCTTGAAAGAAGGCTGTGAATAGAAATAATGGTCACGAAGTGGTAGAAAAAAAAAATCTTGTGGAATAGAAGGAAAGCTTGTGTATGTATGATTCTCAAAGTTATGTTATTGACTTCTTATTTCACATGAACATTTGGACTTGGATTTAATATGTTCTCCTTATTGTGTCCATGCAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAAATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGTATTTGACCTTCCAATTGCAGTTCAGAACAAATATTTTCCTAGATTTAGTTAAATCCCTTTTCCTCTGTGGATGTGATGTGCAATTATATGGTTTTTAAATTAATGCTTTTTCTTGGATTCAAATTACAAAAACCTGATTGCTCGATGAGTTTTTGCATAGAACATTAGGTGTATTGTCTCTTATTTAGCCTGTGAATTTGAAATTTCATCTATAGGGAGAAATGGTTCAGACTTCATCCTTGCAAATAATTTATAATTTATGGTTAAAAATACCATTTTGGTCCTATGTGCTGAATTTTGTTTTATTTTAGTCCCTATACTTTTCAATGTCCTGTTTAAATTTTTGTACTTTCAAGAAATCTTAGATTTAGTTCCTACTACTTGCTTATTTATTGTTGACTTTTTCAAAAACTTTTTATTTATTTATTAGCATTTTTATTTTAAATTTTTAAAACATATTCATATATTATATTTTCATGCTTGAAAATTATTGTTATTATTTAGCCAATTCCGATAAGAATTAACTTTGAGAGACTAAGTTTACGATTTATTAAAAGTACAGGGATTAAAATTGGACATTTATAGGTACATGGACTAAAATTGAACTTACATCACAGTACTGGGACCAAAAATGGTATTTTAACCGTAATTTTCTTTTGCTTTTTTGCTTTATTTTTTTATTTTTGTATTTTTTTAAAATATATTATTATTTTTTTTTTCTTTTTGTTTTTGTTGTTGGTGGTGGTGGTGGTGTTGGTGAACGTTAAAACACCCTAGTACAAAATAGGATCTAAGGAAAAGGTCTGGGAATTGGGAATGAGGCTTACTTCAGAAAAGTATAACAGACAAAATCATCTACAAACCTATAGCAGACAATCATTTACCTAAATTATAATACATTGTTTTATATTTTCTAGCTTGGCTAAATGGGTATTTTGGTACAGAAAAAAGGACTCCTCGGTAAAATTGGTTATGCGTGCTATCTTTCTGTTAGCAAGCTTTCATAAGTCGCAATAACTTGTGTAATGCTCACAGTGAATTACACTGATGAAATGGTGATGAAATCTTAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGTGCGTACTATGGGTATGGAGGGACTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTAAGTTTTATTCTCCTTATAAGGCAAGAGCTCCATACTCTTCTGTGGTAGATAGTGGGCAAAGTGATTGTTATAATCTATTTGTTTGCAGCCATTTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGCCCTTTCAGGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATTTATAGAAAAAGGTTGATCTATCCAGAAAATTTGTTGCCTTTTTGATCTTGGAACTATTTATTTGAACACTTCTCTTTTAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCAGTCCCTTCTGTGGAACAGGGAGAGGAATGGAATGATACGCTTGATACGCCAGATGTTGATTAGTAAGTATCTCTCTCTTTTGTCCCTAAGGAGCTACAATACAAGATTGGAAATGTACAAATCTATTATTATTTGATCTTGCATTGACATCAAGTTGCAAATTTTGCAGTTTAAATGATGCATACCTCTCAAAACATGAAAGTGCGATTTTAGGCTGGCCATTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGAGCTCGGTGTCTGCACCTCGGTCGTTGTTTGTAGTCAATAGGTTGTCAGTGCATGAAGGCAGCTGGAGGAAAATTATGGTATGTGCTTTATATGCTTGACCATACTCTTAGTCGATGATATCGACACAATACTGTTGCCGCGTACTACAGCGTGTTTGATTTAATCATTCATTTTTTACTATAGGAACGGGATTGCCAGGGTTAGGTGCTTTGATGCTGTATGTATTATGATGCTCTCTGCCATTTGGAAATGGAGTTTTCATATCAGGAGAACATCTGCTTTAATCTGTACCTTGTTTCATATTCATAGTTGTGTTTTAAAACAGGGAGATTGAGCTGATAATTGTTTGTCAGTTGAGATTTAGCAAAAAGAAAATGAAGCTGAAATGAAACGAAGTTTTTAATGAATGGAGTGATGAAGACGGTTGTTCCTAAAACAAATTTCTCAATTTTCCCCTCTTCATGAGTGAAATATAAATTTTAGTAACTGCATCAATCTTGTATCCA ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTTAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGCAGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGGTTTCGGCCTCTTTCTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCACCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAACTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGCTCCATAAGGCCGCGTTGCAAGCACAAACTAAGCTCAAGAAGGATAGTTTACTAGTTGAAACAAAACTTCCGAGCTTCCACGGTCAACCAACTCACCATCAACCAACTACGGTAGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTATTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTAATATCAATTAAAATAATTCGCAACAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCCGCAGCAGAAAGAATTTTGCAGACATACAATGGGACCCAGATGCCTGGAACGGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCGGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGTGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTATTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATCTTTGTCGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTTCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAAATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGTGCGTACTATGGGTATGGAGGGACTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCAGTCCCTTCTGTGGAACAGGGAGAGGAATGGAATGATACGCTTGATACGCCAGATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGTGCGATTTTAGGCTGGCCATTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGAGCTCGGTGTCTGCACCTCGGTCGTTGTTTGTAGTCAATAGGTTGTCAGTGCATGAAGGCAGCTGGAGGAAAATTATGGAACGGGATTGCCAGGGTTAGGTGCTTTGATGCTGTATGTATTATGATGCTCTCTGCCATTTGGAAATGGAGTTTTCATATCAGGAGAACATCTGCTTTAATCTGTACCTTGTTTCATATTCATAGTTGTGTTTTAAAACAGGGAGATTGAGCTGATAATTGTTTGTCAGTTGAGATTTAGCAAAAAGAAAATGAAGCTGAAATGAAACGAAGTTTTTAATGAATGGAGTGATGAAGACGGTTGTTCCTAAAACAAATTTCTCAATTTTCCCCTCTTCATGAGTGAAATATAAATTTTAGTAACTGCATCAATCTTGTATCCA ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTTAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGCAGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGGTTTCGGCCTCTTTCTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCACCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAACTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGCTCCATAAGGCCGCGTTGCAAGCACAAACTAAGCTCAAGAAGGATAGTTTACTAGTTGAAACAAAACTTCCGAGCTTCCACGGTCAACCAACTCACCATCAACCAACTACGGTAGAGGAAGTTAGAACACTTTGGATAGGGGATTTGCAGTATTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTAATATCAATTAAAATAATTCGCAACAAGATCACTGGCCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCCGCAGCAGAAAGAATTTTGCAGACATACAATGGGACCCAGATGCCTGGAACGGAGCAAACTTTCAGATTGAATTGGGCCTCCTTTGGAATTGGAGAAAGGCGCCCGGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGTGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACTGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCAGAAATGAATGGTATTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACCATTGGTGTTCAGCAGCAATATAGTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACATCCGTGCCTGTGCTTCCAGCAGATTATGATGCAAATAACACAACAATCTTTGTCGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTGCTTATGTGAAAATTCCTTCCGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAAATAATTGGTCAACAAGTGGTTCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCAAACCAGTGGAGTGCGTACTATGGGTATGGAGGGACTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCAGTCCCTTCTGTGGAACAGGGAGAGGAATGGAATGATACGCTTGATACGCCAGATGTTGATTATTTAAATGATGCATACCTCTCAAAACATGAAAGTGCGATTTTAGGCTGGCCATTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGA MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMQCPQTEAWNSIIRGFAQSSSPIEAIVFYNRMVSASFSSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARTSDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYWLHKAALQAQTKLKKDSLLVETKLPSFHGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGIYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPSGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLAAVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSLVRQT Homology
BLAST of CaUC01G004240 vs. NCBI nr
Match: XP_038890323.1 (pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida] >XP_038890324.1 pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida] >XP_038890325.1 pentatricopeptide repeat-containing protein At3g56550 [Benincasa hispida]) HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00 Identity = 539/579 (93.09%), Postives = 561/579 (96.89%), Query Frame = 0
BLAST of CaUC01G004240 vs. NCBI nr
Match: XP_004152881.1 (pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus] >XP_011648994.1 pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus] >XP_031737318.1 pentatricopeptide repeat-containing protein At3g56550 isoform X1 [Cucumis sativus]) HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00 Identity = 524/579 (90.50%), Postives = 549/579 (94.82%), Query Frame = 0
BLAST of CaUC01G004240 vs. NCBI nr
Match: XP_016899519.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo] >XP_016899520.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo] >XP_016899521.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo] >XP_016899522.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo] >XP_016899523.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo] >KAA0047714.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08368.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 1071.2 bits (2769), Expect = 5.5e-309 Identity = 525/579 (90.67%), Postives = 550/579 (94.99%), Query Frame = 0
BLAST of CaUC01G004240 vs. NCBI nr
Match: XP_022149932.1 (pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149933.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149934.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia] >XP_022149935.1 pentatricopeptide repeat-containing protein At3g56550 [Momordica charantia]) HSP 1 Score: 1048.9 bits (2711), Expect = 2.9e-302 Identity = 501/579 (86.53%), Postives = 545/579 (94.13%), Query Frame = 0
BLAST of CaUC01G004240 vs. NCBI nr
Match: XP_023537237.1 (pentatricopeptide repeat-containing protein At3g56550 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 1047.7 bits (2708), Expect = 6.4e-302 Identity = 508/579 (87.74%), Postives = 540/579 (93.26%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy Swiss-Prot
Match: Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 716.8 bits (1849), Expect = 3.4e-205 Identity = 348/579 (60.10%), Postives = 441/579 (76.17%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 5.4e-163 Identity = 292/421 (69.36%), Postives = 332/421 (78.86%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 456.4 bits (1173), Expect = 8.2e-127 Identity = 238/579 (41.11%), Postives = 360/579 (62.18%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 428.3 bits (1100), Expect = 2.4e-118 Identity = 224/574 (39.02%), Postives = 346/574 (60.28%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.7e-117 Identity = 230/630 (36.51%), Postives = 364/630 (57.78%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy TrEMBL
Match: A0A0A0LH20 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074120 PE=3 SV=1) HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00 Identity = 524/580 (90.34%), Postives = 550/580 (94.83%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy TrEMBL
Match: A0A1S4DU66 (pentatricopeptide repeat-containing protein At3g56550 OS=Cucumis melo OX=3656 GN=LOC103485901 PE=3 SV=1) HSP 1 Score: 1071.2 bits (2769), Expect = 2.7e-309 Identity = 525/579 (90.67%), Postives = 550/579 (94.99%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy TrEMBL
Match: A0A5A7TXJ9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001800 PE=3 SV=1) HSP 1 Score: 1071.2 bits (2769), Expect = 2.7e-309 Identity = 525/579 (90.67%), Postives = 550/579 (94.99%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy TrEMBL
Match: A0A6J1D832 (pentatricopeptide repeat-containing protein At3g56550 OS=Momordica charantia OX=3673 GN=LOC111018226 PE=3 SV=1) HSP 1 Score: 1048.9 bits (2711), Expect = 1.4e-302 Identity = 501/579 (86.53%), Postives = 545/579 (94.13%), Query Frame = 0
BLAST of CaUC01G004240 vs. ExPASy TrEMBL
Match: A0A6J1FBZ0 (pentatricopeptide repeat-containing protein At3g56550 OS=Cucurbita moschata OX=3662 GN=LOC111444025 PE=3 SV=1) HSP 1 Score: 1043.1 bits (2696), Expect = 7.6e-301 Identity = 505/579 (87.22%), Postives = 539/579 (93.09%), Query Frame = 0
BLAST of CaUC01G004240 vs. TAIR 10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 716.8 bits (1849), Expect = 2.4e-206 Identity = 348/579 (60.10%), Postives = 441/579 (76.17%), Query Frame = 0
BLAST of CaUC01G004240 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 576.6 bits (1485), Expect = 3.9e-164 Identity = 292/421 (69.36%), Postives = 332/421 (78.86%), Query Frame = 0
BLAST of CaUC01G004240 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 572.8 bits (1475), Expect = 5.6e-163 Identity = 287/416 (68.99%), Postives = 326/416 (78.37%), Query Frame = 0
BLAST of CaUC01G004240 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 456.4 bits (1173), Expect = 5.8e-128 Identity = 238/579 (41.11%), Postives = 360/579 (62.18%), Query Frame = 0
BLAST of CaUC01G004240 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-119 Identity = 224/574 (39.02%), Postives = 346/574 (60.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|