CaUC01G002620 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G002620
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr01: 2659338 .. 2660719 (+)
RNA-Seq Expression	CaUC01G002620
Synteny	CaUC01G002620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATATAATGAATGTGTTATAGGCCCAAAAGAAATGTCAACTTCCTAGCTCAAATCTCAATTTATTTGAACCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGAGGAGCATGTTCCCTTGTCATCTCCACTTAGTACTCCCCCAGCATTTTCAACCGGGCTTTTAGTTGACACGAATCTTGATACATCAATCCCAGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCATCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAGCAGCATGCATAAATACTCGGGAAACTTCAACCAAATTTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATCGAAGAAGAGGATGTTTGTCCCATCTGTTTGGAAGGTGAAGTTTTGGCAAAACTTTGTTTAGCTGCCTAATACCAACCCACCAAACCATGGAACTTTTATTGAACCTCCTTTGTCTATTGCCAATGTCTGACATTTTAGTTACTTAAACTAACAAGTCGCCACATCGACGCTTTCACGATAGCTGCACAGTACCACTCCATTCCATTTTAATTCCTTGGACTAACAAGTCACCTACTCATCATTTTCTGTTGTTTTATGCAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTCTCAGTTTACGTTTTTTCATTCATCACTCGTGAAAAAACATTAGACATTCCATCTGCCAAAACCAATTTCAACATGTCTATATGAATCTCCACCTTTGGGATTGATAAGCCTCTTTAATCTTATTTGACCAAAGAGATACAACTTTGCATGATAGTTAGTTTAGCACCAATCAGAAAGTATCGAATTCTTGTTATACATAGCTTGTAATGCACTAAGAAGGCCTATTTTATATCCTAATTATCTCCTCCTGAAATGCAGGAAATGGTTTTTAGCTCTCCAATTGATTAGTGGCAAGAAGAAAATCAGGCAAGTGTTTTTCTCACATTGAAGTAAAGTTGAAAGTATAGGTTATAAAGTTTTCTCGTGATTTTGCGTCCAGTTGCCAGCTTCAAGTTTCTTTTAGTTGTTTTCTCTTCTTTTTTTTTTTTCCCCTTCCTTCATGAGTTGTTCATTCCTGGTTGCACTTTTCTGTGTGAATTTGTTCTCTGAACATAGAATGGTGGGTGGGG

mRNA sequence

TGAATATAATGAATGTGTTATAGGCCCAAAAGAAATGTCAACTTCCTAGCTCAAATCTCAATTTATTTGAACCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGAGGAGCATGTTCCCTTGTCATCTCCACTTAGTACTCCCCCAGCATTTTCAACCGGGCTTTTAGTTGACACGAATCTTGATACATCAATCCCAGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCATCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAGCAGCATGCATAAATACTCGGGAAACTTCAACCAAATTTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATCGAAGAAGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGAAATGGTTTTTAGCTCTCCAATTGATTAGTGGCAAGAAGAAAATCAGGCAAGTGTTTTTCTCACATTGAAGTAAAGTTGAAAGTATAGGTTATAAAGTTTTCTCGTGATTTTGCGTCCAGTTGCCAGCTTCAAGTTTCTTTTAGTTGTTTTCTCTTCTTTTTTTTTTTTCCCCTTCCTTCATGAGTTGTTCATTCCTGGTTGCACTTTTCTGTGTGAATTTGTTCTCTGAACATAGAATGGTGGGTGGGG

Coding sequence (CDS)

ATGTGTTATAGGCCCAAAAGAAATGTCAACTTCCTAGCTCAAATCTCAATTTATTTGAACCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGAGGAGCATGTTCCCTTGTCATCTCCACTTAGTACTCCCCCAGCATTTTCAACCGGGCTTTTAGTTGACACGAATCTTGATACATCAATCCCAGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCATCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAGCAGCATGCATAAATACTCGGGAAACTTCAACCAAATTTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTTTGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATCGAAGAAGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTGTGCGATCAGGAAATGGTTTTTAGCTCTCCAATTGATTAG

Protein sequence

MCYRPKRNVNFLAQISIYLNLSFELLMQYPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVAQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSPID

Homology

[Close]

BLAST of CaUC01G002620 vs. NCBI nr
Match: XP_038876112.1 (probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876115.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97
Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPLSTPPAFS GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+P    V
Sbjct: 23  YPRASEEHVPLSSPLSTPPAFSRGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPV 82

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEI 148
           AQEIGSNKNDAAAQTTNPDTIQE ACINTRETS K EG+DESDCKKHTDFEVDTLKESEI
Sbjct: 83  AQEIGSNKNDAAAQTTNPDTIQETACINTRETSAKCEGVDESDCKKHTDFEVDTLKESEI 142

Query: 149 ELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 208
           ELSKGVES+VLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESMVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

Query: 209 QEMVFSSPID 219
           QEMVFSSPID
Sbjct: 203 QEMVFSSPID 212

[Close]

BLAST of CaUC01G002620 vs. NCBI nr
Match: KAG7016978.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 175/194 (90.21%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 26  LMQYPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHI 85
           +M YPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH 
Sbjct: 56  IMSYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHT 115

Query: 86  SSVAQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLK 145
             VAQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLK
Sbjct: 116 PPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLK 175

Query: 146 ESEIELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDIC 205
           ESEIELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEW+ERSDIC
Sbjct: 176 ESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWVERSDIC 235

Query: 206 PVCDQEMVFSSPID 219
           PVCDQEMVFS PID
Sbjct: 236 PVCDQEMVFSPPID 249

[Close]

BLAST of CaUC01G002620 vs. NCBI nr
Match: KAG6579518.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 175/191 (91.62%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH   V
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLKESE 148
           AQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 143

Query: 149 IELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 208
           IELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

Query: 209 DQEMVFSSPID 219
           DQEMVFS PID
Sbjct: 204 DQEMVFSPPID 214

[Close]

BLAST of CaUC01G002620 vs. NCBI nr
Match: XP_023551494.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 175/191 (91.62%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH   V
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLKESE 148
           AQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIGDESDCKKHTDFEVDTLKESE 143

Query: 149 IELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 208
           IELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

Query: 209 DQEMVFSSPID 219
           DQEMVFS PID
Sbjct: 204 DQEMVFSPPID 214

[Close]

BLAST of CaUC01G002620 vs. NCBI nr
Match: XP_022929148.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 175/191 (91.62%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH   V
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLKESE 148
           AQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 143

Query: 149 IELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 208
           IELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

Query: 209 DQEMVFSSPID 219
           DQEMVFS PID
Sbjct: 204 DQEMVFSPPID 214

[Close]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 30  PRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVA 89
           P + EE VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 90  QEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIE 149
                       Q T+ ++I+     ++ ET    E + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 150 LSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 209
             +G++  +L  EEED CPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 190

Query: 210 EMVFSSPID 219
           E+VF   ++
Sbjct: 203 EVVFDDRLN 190

[Close]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-19
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 60  DTSIPDTYRSPPLPMPYDVVLTNPHISSVAQEIGSNKNDAAAQ--TTNPDTIQEAACINT 119
           D  + + +RS P P+PYD            +E GS+ +    +   ++ D   E+  +  
Sbjct: 70  DNFLSEAFRSTPRPLPYDADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGG 129

Query: 120 RETSTKFEGIDESDCKKH--TDFEVDTLKESEIELSKGVESVVLPIEEEDVCPICLEEYD 179
            + +     + + D K+   +   +  L+     +    E++ +  E+EDVCP CLEEY 
Sbjct: 130 CKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYT 189

Query: 180 GENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFS 215
            ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F+
Sbjct: 190 SENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFN 228

[Close]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.6e-16
Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 62  SIPDTYRS----PPLPMPYDVVLTNPHISSVAQEIGSNKNDAAAQTTNPDTIQEAACINT 121
           SIP++ R+     PL       L+N + S ++  I     +   QT+ P   +     N+
Sbjct: 9   SIPESSRTIDEHLPLSRATPSSLSNAYSSPLSPPIPLAITNINLQTSPPKLPRTQG--NS 68

Query: 122 RETSTKFEGIDESDCKKHTDFEVDTLKESEIELSKGVESVVLPIEEEDVCPICLEEYDGE 181
            E S    G+ +   +K T + VD L  ++ EL K     +      D CPICLEEY+ +
Sbjct: 69  SEAS---PGLTQVVPEKKT-WHVDDL--TDFELKKQYREAI------DECPICLEEYEID 128

Query: 182 NPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFS 215
           NPKL TKC H FHLACIL WMERS+ CPVCD+E+V +
Sbjct: 129 NPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLT 151

[Close]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.7e-10
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 164 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSP 217
           +D C ICLE +  ++P   T C+H +HL CI+EW +RS  CP+C Q  V   P
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDP 95

[Close]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 164 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSP 217
           +D C ICLE +   +P   T C+H +HL CILEW +RS  CP+C Q +    P
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82

[Close]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL
Match: A0A6J1ER94 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC111435815 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 175/191 (91.62%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPLS PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH   V
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLKESE 148
           AQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 143

Query: 149 IELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 208
           IELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

Query: 209 DQEMVFSSPID 219
           DQEMVFS PID
Sbjct: 204 DQEMVFSPPID 214

[Close]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL
Match: A0A6J1DPI0 (probable E3 ubiquitin-protein ligase RHB1A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.5e-93
Identity = 169/192 (88.02%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 27  MQYPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHIS 86
           MQYPRAS+EHVPLSSP+  P AFS+GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  
Sbjct: 1   MQYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTP 60

Query: 87  SVAQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKES 146
            VAQEIGSNKNDAAAQTTN D +QE AC N RETS K EGIDESDCKKHTDFE DTLKES
Sbjct: 61  PVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEGIDESDCKKHTDFETDTLKES 120

Query: 147 EIELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 206
           EIELSKGVESV L IEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV
Sbjct: 121 EIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 180

Query: 207 CDQEMVFSSPID 219
           CDQEM+FS PID
Sbjct: 181 CDQEMLFSPPID 192

[Close]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL
Match: A0A6J1I4I7 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111469091 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 172/191 (90.05%), Postives = 177/191 (92.67%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPL+ PPAF  GLLVDTNLDTSIPDTYRSPPLPMPY+VVL++PH   V
Sbjct: 23  YPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYNVVLSHPHTPPV 82

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGI-DESDCKKHTDFEVDTLKESE 148
           AQEI SNKNDAAAQTTN DTIQE  CINTRETS K EGI DESDCKKHTDFEVDTLKESE
Sbjct: 83  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 142

Query: 149 IELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 208
           IELSKGV+SVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 143 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 202

Query: 209 DQEMVFSSPID 219
           DQEMVFS PID
Sbjct: 203 DQEMVFSPPID 213

[Close]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL
Match: A0A5A7TH60 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002410 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 171/190 (90.00%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPL TP AFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+P    V
Sbjct: 23  YPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPV 82

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEI 148
           AQEIGS KN+AAAQT N +TIQE ACINTRE S K EG+DESDCKKHTDFEV+TLKESEI
Sbjct: 83  AQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEGVDESDCKKHTDFEVNTLKESEI 142

Query: 149 ELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 208
           ELSKGVES VLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

Query: 209 QEMVFSSPID 219
           QEMVFSSPID
Sbjct: 203 QEMVFSSPID 212

[Close]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL
Match: A0A1S3AU90 (E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC103482766 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 171/190 (90.00%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSV 88
           YPRASEEHVPLSSPL TP AFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+P    V
Sbjct: 23  YPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPV 82

Query: 89  AQEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEI 148
           AQEIGS KN+AAAQT N +TIQE ACINTRE S K EG+DESDCKKHTDFEV+TLKESEI
Sbjct: 83  AQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEGVDESDCKKHTDFEVNTLKESEI 142

Query: 149 ELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 208
           ELSKGVES VLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

Query: 209 QEMVFSSPID 219
           QEMVFSSPID
Sbjct: 203 QEMVFSSPID 212

[Close]

BLAST of CaUC01G002620 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42
Identity = 95/193 (49.22%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 29  YPRASEEHVPLSSPLS-TPPAFSTG-LLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHIS 88
           YPRA+EE VPLSS  + T  A STG ++VDTNL+TS PD Y  PPLP P+DV +  P   
Sbjct: 24  YPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSSPDAYIPPPLPTPFDVPIGIPQTP 83

Query: 89  SVAQEIGS-NKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKE 148
           +  +E    +  + +  + N ++ QE     T    T      E+D K  T+ ++++ +E
Sbjct: 84  ASGEEATCVDIREVSVDSANTESAQETVDGITLGVPTTCSH-KETDSKIQTEIDLESTEE 143

Query: 149 SEIELSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICP 208
            + +LSK   +V +PIEEE+ CPICLEEYD ENPKL  KC+HHFHLACILEWMERS+ CP
Sbjct: 144 IDPKLSK---AVFIPIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCP 203

Query: 209 VCDQEMVFSSPID 219
           VC++EMVF S +D
Sbjct: 204 VCNKEMVFDSTLD 212

[Close]

BLAST of CaUC01G002620 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 30  PRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVA 89
           P + EE VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 90  QEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIE 149
                       Q T+ ++I+     ++ ET    E + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 150 LSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 209
             +G++  +L  EEED CPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 190

Query: 210 EMVFSSPID 219
           E+VF   ++
Sbjct: 203 EVVFDDRLN 190

[Close]

BLAST of CaUC01G002620 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 30  PRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVA 89
           P + EE VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 90  QEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIE 149
                       Q T+ ++I+     ++ ET    E + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 150 LSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 209
             +G++  +L  EEED CPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 190

Query: 210 EMVFSSPID 219
           E+VF   ++
Sbjct: 203 EVVFDDRLN 190

[Close]

BLAST of CaUC01G002620 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A )

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 77/180 (42.78%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 30  PRASEEHVPLSSPLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVA 89
           P + EE VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 90  QEIGSNKNDAAAQTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIE 149
                       Q T+ ++I+     ++ ET    E + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 150 LSKGVESVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 209
             +G++  +L  EEED CPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of CaUC01G002620 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.4e-23
Identity = 64/175 (36.57%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 42  PLSTPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISSVAQEIGSNKNDAAA 101
           P+ +    +T +   T LD S+   Y SPP P+PYD    +P      +  GS+ +   +
Sbjct: 52  PIPSTVETATVMNSTTALDDSLSSVYHSPPTPLPYD---ADPRYFRFVK--GSSHSGEES 111

Query: 102 QTTNPDTIQEAACINTRETSTKFEGIDESDCKKHTDFEVDTLKESEIELSK---GVESVV 161
           +    DT   +  +   +   K+   D  D  K    EV T   S    SK   G+E   
Sbjct: 112 EPLRGDTEMSSEALG--DGGAKWSKSDSEDGSK----EVYTKGSSTFTKSKTMPGIEVYY 171

Query: 162 LPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVF 214
              ++ED+CP CL++Y  ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F
Sbjct: 172 ADSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215

The following BLAST results are available for this feature:

BLAST of CaUC01G002620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876112.1	1.1e-97	94.21	probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 p...	[more]
KAG7016978.1	1.2e-93	90.21	putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs...	[more]
KAG6579518.1	2.1e-93	91.62	putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs...	[more]
XP_023551494.1	2.1e-93	91.62	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo]	[more]
XP_022929148.1	2.1e-93	91.62	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata]	[more]

BLAST of CaUC01G002620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIJ8	2.3e-34	42.33	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LE94	2.1e-19	33.96	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q93ZF6	3.6e-16	38.85	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q4TU14	8.7e-10	45.28	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	1.5e-09	45.28	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of CaUC01G002620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER94	1.0e-93	91.62	probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1DPI0	6.5e-93	88.02	probable E3 ubiquitin-protein ligase RHB1A isoform X2 OS=Momordica charantia OX=...	[more]
A0A6J1I4I7	2.5e-92	90.05	probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7TH60	2.5e-92	90.00	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3AU90	2.5e-92	90.00	E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC1034827...	[more]

BLAST of CaUC01G002620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41350.1	6.8e-42	49.22	RING/U-box superfamily protein	[more]
AT4G00335.1	1.6e-35	42.33	RING-H2 finger B1A	[more]
AT4G00335.2	1.6e-35	42.33	RING-H2 finger B1A	[more]
AT4G00335.3	2.0e-33	42.78	RING-H2 finger B1A	[more]
AT5G38895.1	5.4e-23	36.57	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 167..207 e-value: 6.3E-8 score: 42.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 166..207 e-value: 1.4E-11 score: 44.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 167..208 score: 12.061441
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 137..214 e-value: 2.6E-16 score: 60.6
None	No IPR available	PANTHER	PTHR46463:SF37	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN	coord: 26..218
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 26..218
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 161..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G002620.1	CaUC01G002620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004842	ubiquitin-protein transferase activity