CaUC01G002360 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G002360
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	late embryogenesis abundant protein At1g64065
Location	Ciama_Chr01: 2343363 .. 2343977 (-)
RNA-Seq Expression	CaUC01G002360
Synteny	CaUC01G002360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCGACGAAATTTTCGGCGTACGGCCGGCGACCCTCCGATCAAGGCGTAAAGCATCAGAAAAATGCTTAAACACCTTCTGCATTTGCCTCTTCGCCGCTGCCGCCGTCGCCTGCATCGCAGCTCTAACCCTCGGCCTGGTCGTCCTCCGGGTAAAAATCCCGACCGTAAAATTAACCTCCGTCGCGGTAAAAAATCTCCACTACGGCTTCTCGCCGACCCCTTTCATGGAGGCCACATTAATGGGGGAAATAACGATGGAAAATCCGAATTTCGGGGAGTTCAAGTACGAGGAAGTAAGGAACGTGACATTGATTTACTACGGCGTGGCAGTGGGAATCGGCGAGGTGAAAAGAGTGGATGTAAATGCGAAGAGTATTGAAAAAACGAAGTTTATAGTGAAAGTGAAACCCAATTCGAGCTTTGTTGATGTGGATTATTTCAGCGATGATTTGGCGAGGTTGAAGACGATGAATATGAGTTGCATCGCCGAGTTTAAGGGAAGGATTCGTTTGTTGAAATTGTTTAAAGAGAAGAAAATTTCTGTGTTGAAATGTAGTATGAGCTTGAATTTGACCTCCCATGCCCTCCAAAATCTTGCTTGCCTGTAG

mRNA sequence

ATGGCGGCCGACGAAATTTTCGGCGTACGGCCGGCGACCCTCCGATCAAGGCGTAAAGCATCAGAAAAATGCTTAAACACCTTCTGCATTTGCCTCTTCGCCGCTGCCGCCGTCGCCTGCATCGCAGCTCTAACCCTCGGCCTGGTCGTCCTCCGGGTAAAAATCCCGACCGTAAAATTAACCTCCGTCGCGGTAAAAAATCTCCACTACGGCTTCTCGCCGACCCCTTTCATGGAGGCCACATTAATGGGGGAAATAACGATGGAAAATCCGAATTTCGGGGAGTTCAAGTACGAGGAAGTAAGGAACGTGACATTGATTTACTACGGCGTGGCAGTGGGAATCGGCGAGGTGAAAAGAGTGGATGTAAATGCGAAGAGTATTGAAAAAACGAAGTTTATAGTGAAAGTGAAACCCAATTCGAGCTTTGTTGATGTGGATTATTTCAGCGATGATTTGGCGAGGTTGAAGACGATGAATATGAGTTGCATCGCCGAGTTTAAGGGAAGGATTCGTTTGTTGAAATTGTTTAAAGAGAAGAAAATTTCTGTGTTGAAATGTAGTATGAGCTTGAATTTGACCTCCCATGCCCTCCAAAATCTTGCTTGCCTGTAG

Coding sequence (CDS)

ATGGCGGCCGACGAAATTTTCGGCGTACGGCCGGCGACCCTCCGATCAAGGCGTAAAGCATCAGAAAAATGCTTAAACACCTTCTGCATTTGCCTCTTCGCCGCTGCCGCCGTCGCCTGCATCGCAGCTCTAACCCTCGGCCTGGTCGTCCTCCGGGTAAAAATCCCGACCGTAAAATTAACCTCCGTCGCGGTAAAAAATCTCCACTACGGCTTCTCGCCGACCCCTTTCATGGAGGCCACATTAATGGGGGAAATAACGATGGAAAATCCGAATTTCGGGGAGTTCAAGTACGAGGAAGTAAGGAACGTGACATTGATTTACTACGGCGTGGCAGTGGGAATCGGCGAGGTGAAAAGAGTGGATGTAAATGCGAAGAGTATTGAAAAAACGAAGTTTATAGTGAAAGTGAAACCCAATTCGAGCTTTGTTGATGTGGATTATTTCAGCGATGATTTGGCGAGGTTGAAGACGATGAATATGAGTTGCATCGCCGAGTTTAAGGGAAGGATTCGTTTGTTGAAATTGTTTAAAGAGAAGAAAATTTCTGTGTTGAAATGTAGTATGAGCTTGAATTTGACCTCCCATGCCCTCCAAAATCTTGCTTGCCTGTAG

Protein sequence

MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKLTSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKRVDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEKKISVLKCSMSLNLTSHALQNLACL

Homology

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BLAST of CaUC01G002360 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 9.7e-85
Identity = 171/204 (83.82%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAAD+I G RP   RSRRK+S+KCLN FCICLFAAAA ACIAALT GLVVLRVK PTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSVAVKNLHYGFSPTPFMEATL GEITMENPN+G F+YE VRNVTLIYYGV VGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           + VNAKSIEK KFIVKVKPN  FV+VDYFSDDLARLKTMNMS  AEF+G+I LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLACL 205
           KISV+KCS SLNLTSH +QNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CaUC01G002360 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84
Identity = 169/203 (83.25%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAA +    RPATLRSRRKASEKC+NTFCI LFA AAVACIAAL LGLVV+RVK PTVKL
Sbjct: 1   MAAGQPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSV VKNLHYGFSPTPFM+ATL+ EITMENPNFGEFKYEEV N TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           V VNAKS +K  F VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEFKGR+RLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLAC 204
           K+S+LKC+MSLNL+SH +QNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of CaUC01G002360 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84
Identity = 170/203 (83.74%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAA E    RPATLRSRRKASEKC+NTFCI LFA AAVACIAAL LGLVV+RVK PTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSV VKNLHYGFSPTPFM+ATL+ EITMENPNFGEFKYEEV N TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           V VNAKS +K  F VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEFKGR+RLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLAC 204
           K+S+LKC+MSLNL SH +QNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of CaUC01G002360 vs. NCBI nr
Match: XP_022970100.1 (late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016995.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 169/203 (83.25%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAA E    RPATLRSRRKASEKC+NTFCI LFA AAVACIAAL LGLVV+RVK PTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSV VKNLHYGFSPTPFM+ATL+ EITMENPNFGEFKYEEV N TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           V VNAKS +   F VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEFKGR+RLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLAC 204
           K+S+LKC+MSLNL+SH +QNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of CaUC01G002360 vs. NCBI nr
Match: KAE8647845.1 (hypothetical protein Csa_000600 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 164/204 (80.39%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAAD+I G R A  RSRRK+ +KCLNTFCICLF AAA ACIAALT GLVVLRVK PTVKL
Sbjct: 211 MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 270

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSVAVK+L YGFSPTPFMEATL GE+TMENPN+G F+YE V NVTLIYYGV VGIGEVKR
Sbjct: 271 TSVAVKHLQYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 330

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           + VNAKSIEK +F VKVKPN  FV+VDYFSDDL RLKTMNMS  AEF+G+I LLKLFKEK
Sbjct: 331 LSVNAKSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 390

Query: 181 KISVLKCSMSLNLTSHALQNLACL 205
           KISVLKCS SLNLTSH +QNLACL
Sbjct: 391 KISVLKCSTSLNLTSHGVQNLACL 414

[Close]

BLAST of CaUC01G002360 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-12
Identity = 63/195 (32.31%), Postives = 106/195 (54.36%), Query Frame = 0


Query: 17  RRKASE---KCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKLTSVAVKNLHYGFS 76
           RRK  E   KCL  + + +       C   L L  + LR+  P ++  S++ ++L  G +
Sbjct: 29  RRKTEEPPGKCL-VYSLTIIVIIFALC---LILSSIFLRISKPEIETRSISTRDLRSGGN 88

Query: 77  PT-PFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVK----RVDVNAKSI 136
            T P+  ATL+ +I++ N NFG F++E+   + ++Y    V +GE K    RV+ + K++
Sbjct: 89  STNPYFNATLVSDISIRNSNFGAFEFED-STLRVVYADHGV-VGETKIEGRRVEAH-KTV 148

Query: 137 EKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEKKISVLKCS 196
             T  +V++  +   +D      DL RL  + +  +AE +GRI++L   K  K+SV+ C+
Sbjct: 149 RITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRWKVSVMSCT 208

Query: 197 MSLNLTSHALQNLAC 204
           M LNLT   +QNL C
Sbjct: 209 MRLNLTGRFIQNLLC 213

[Close]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.7e-85
Identity = 171/204 (83.82%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAAD+I G RP   RSRRK+S+KCLN FCICLFAAAA ACIAALT GLVVLRVK PTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSVAVKNLHYGFSPTPFMEATL GEITMENPN+G F+YE VRNVTLIYYGV VGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           + VNAKSIEK KFIVKVKPN  FV+VDYFSDDLARLKTMNMS  AEF+G+I LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLACL 205
           KISV+KCS SLNLTSH +QNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.7e-85
Identity = 171/204 (83.82%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAAD+I G RP   RSRRK+S+KCLN FCICLFAAAA ACIAALT GLVVLRVK PTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSVAVKNLHYGFSPTPFMEATL GEITMENPN+G F+YE VRNVTLIYYGV VGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           + VNAKSIEK KFIVKVKPN  FV+VDYFSDDLARLKTMNMS  AEF+G+I LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLACL 205
           KISV+KCS SLNLTSH +QNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.1e-85
Identity = 170/203 (83.74%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAA E    RPATLRSRRKASEKC+NTFCI LFA AAVACIAAL LGLVV+RVK PTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSV VKNLHYGFSPTPFM+ATL+ EITMENPNFGEFKYEEV N TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           V VNAKS +K  F VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEFKGR+RLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLAC 204
           K+S+LKC+MSLNL SH +QNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 169/203 (83.25%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAA E    RPATLRSRRKASEKC+NTFCI LFA AAVACIAAL LGLVV+RVK PTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSV VKNLHYGFSPTPFM+ATL+ EITMENPNFGEFKYEEV N TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           V VNAKS +   F VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEFKGR+RLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLAC 204
           K+S+LKC+MSLNL+SH +QNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL
Match: A0A0A0KK54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152150 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.9e-80
Identity = 164/204 (80.39%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 1   MAADEIFGVRPATLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKL 60
           MAAD+I G R A  RSRRK+ +KCLNTFCICLF AAA ACIAALT GLVVLRVK PTVKL
Sbjct: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKR 120
           TSVAVK+L YGFSPTPFMEATL GE+TMENPN+G F+YE V NVTLIYYGV VGIGEVKR
Sbjct: 61  TSVAVKHLQYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120

Query: 121 VDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEK 180
           + VNAKSIEK +F VKVKPN  FV+VDYFSDDL RLKTMNMS  AEF+G+I LLKLFKEK
Sbjct: 121 LSVNAKSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180

Query: 181 KISVLKCSMSLNLTSHALQNLACL 205
           KISVLKCS SLNLTSH +QNLACL
Sbjct: 181 KISVLKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CaUC01G002360 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13
Identity = 63/195 (32.31%), Postives = 106/195 (54.36%), Query Frame = 0


Query: 17  RRKASE---KCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKLTSVAVKNLHYGFS 76
           RRK  E   KCL  + + +       C   L L  + LR+  P ++  S++ ++L  G +
Sbjct: 29  RRKTEEPPGKCL-VYSLTIIVIIFALC---LILSSIFLRISKPEIETRSISTRDLRSGGN 88

Query: 77  PT-PFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVK----RVDVNAKSI 136
            T P+  ATL+ +I++ N NFG F++E+   + ++Y    V +GE K    RV+ + K++
Sbjct: 89  STNPYFNATLVSDISIRNSNFGAFEFED-STLRVVYADHGV-VGETKIEGRRVEAH-KTV 148

Query: 137 EKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEKKISVLKCS 196
             T  +V++  +   +D      DL RL  + +  +AE +GRI++L   K  K+SV+ C+
Sbjct: 149 RITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRWKVSVMSCT 208

Query: 197 MSLNLTSHALQNLAC 204
           M LNLT   +QNL C
Sbjct: 209 MRLNLTGRFIQNLLC 213

[Close]

BLAST of CaUC01G002360 vs. TAIR 10
Match: AT2G44000.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 45/151 (29.80%), Postives = 71/151 (47.02%), Query Frame = 0


Query: 57  TVKLTSVAVKNLHY----GFSPTPFMEATLMGEITMENPNFGEFKYEEVRNVTLIYYGVA 116
           T  LTSV V+NL Y      S + +  ATL  EI +ENPN G F++   R   ++Y G  
Sbjct: 62  TASLTSVEVRNLRYNNNTSSSSSLYFNATLAMEIRIENPNLGFFEFPTSRG-EILYNGDV 121

Query: 117 VGIGEVKRVDVNAKSIEKTKFIVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFKGRIR 176
           VG   +    V +    +T+   +V    +     +  +D+ R + + +   A+ +G + 
Sbjct: 122 VGEMRINGQRVASFGDLRTEVSAEVAYRGNQKSPVWLKNDIER-RLIILETRAKLRGEVH 181

Query: 177 LLKLFKEKKISVLKCSMSLNLTSHALQNLAC 204
           L  L   K+   LKC M LNL+   +  L C
Sbjct: 182 LKDL--NKRTVNLKCLMQLNLSDDVIHRLWC 208

[Close]

BLAST of CaUC01G002360 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 48.9 bits (115), Expect = 5.6e-06
Identity = 51/199 (25.63%), Postives = 90/199 (45.23%), Query Frame = 0


Query: 13  TLRSRRKASEKCLNTFCICLFAAAAVACIAALTLGLVVLRVKIPTVKLTSVAVKNLHYGF 72
           T RSR +   KC     IC+ A + +     LTL   V RVK P +K+  V V  L    
Sbjct: 29  THRSRNRI--KC----SICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLD--- 88

Query: 73  SPTPFMEATLMG-------EITMENPNFGEFKYEEVRNVTLIYYGVAVGIGEVKRVDVNA 132
           S T   +  L+G       +++++NPN   FKY    N T   Y     +GE   +   A
Sbjct: 89  SVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYS---NTTTDIYYKGTLVGEAHGLPGKA 148

Query: 133 KSIEKTKFIVKVKPNSSFVDVD-YFSDDLARLKTMNMSCIAEFKGRIRLLKLFKEKKISV 192
           +    ++  V V      +  D     +++R   +N+       G+++++ + K+     
Sbjct: 149 RPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVK 208

Query: 193 LKCSMSLNLTSHALQNLAC 204
           + C+M++N+T  A+Q++ C
Sbjct: 209 MNCTMAVNITGQAIQDVDC 215

The following BLAST results are available for this feature:

BLAST of CaUC01G002360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437351.1	9.7e-85	83.82	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]
XP_023550526.1	1.3e-84	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022929131.1	1.3e-84	83.74	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]
XP_022970100.1	2.2e-84	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 L...	[more]
KAE8647845.1	1.2e-79	80.39	hypothetical protein Csa_000600 [Cucumis sativus]	[more]

BLAST of CaUC01G002360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	5.1e-12	32.31	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CaUC01G002360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMT1	4.7e-85	83.82	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	4.7e-85	83.82	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1EM85	6.1e-85	83.74	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I1W2	1.0e-84	83.25	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KK54	5.9e-80	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152150 PE=4 SV=1	[more]

BLAST of CaUC01G002360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	3.6e-13	32.31	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G44000.1	3.9e-07	29.80	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	5.6e-06	25.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..203
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 21..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G002360.1	CaUC01G002360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane