CaUC01G002110 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G002110
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Aa_trans domain-containing protein
Location	Ciama_Chr01: 2065346 .. 2065930 (-)
RNA-Seq Expression	CaUC01G002110
Synteny	CaUC01G002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTAAAATCCCATCAATGTCTCCTCCATTTCCAATACCATTCATTTACTGCATAAACTCCATTTGCTCAAATCCCACTGATTTCCGGCACCACTCTTCAAAACCCAAAAGCCCATCATCATCTCTTTCTCAATTCTGTTTCTTTGTTTCCTTAATCCATGGCAGAGCTTTCTCCGCCGGACTCCTTTTCAAAGCTTTCTTCCGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGTCCGGAATGGGGTTTTCTTTTTTCTTTTCCCCTGCTTCGACAGTTCGAATGAGGTGCTAATTAATTTTTGGCTGAAACAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCCATCGTGGGGCCGCCGATTTTAACTCTGCCGTTTGCGTTTCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTATTCTTACTACCTCTTGTCTAAGGTGCTGGAGCTCCGTGAGAAACAGGGTCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTCCTTTTCAACATGCCGCATTGA

mRNA sequence

TTCTTAAAATCCCATCAATGTCTCCTCCATTTCCAATACCATTCATTTACTGCATAAACTCCATTTGCTCAAATCCCACTGATTTCCGGCACCACTCTTCAAAACCCAAAAGCCCATCATCATCTCTTTCTCAATTCTGTTTCTTTGTTTCCTTAATCCATGGCAGAGCTTTCTCCGCCGGACTCCTTTTCAAAGCTTTCTTCCGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCCATCGTGGGGCCGCCGATTTTAACTCTGCCGTTTGCGTTTCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTATTCTTACTACCTCTTGTCTAAGGTGCTGGAGCTCCGTGAGAAACAGGGTCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTCCTTTTCAACATGCCGCATTGA

Coding sequence (CDS)

ATGGCAGAGCTTTCTCCGCCGGACTCCTTTTCAAAGCTTTCTTCCGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCATGCCGGATTCCACTTGACGACGGCCATCGTGGGGCCGCCGATTTTAACTCTGCCGTTTGCGTTTCGAGGATTGGGTTGGGGAGTGGGATTTGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTATTCTTACTACCTCTTGTCTAAGGTGCTGGAGCTCCGTGAGAAACAGGGTCGCCGCCACATCCGCTTCCGGGAACTCGCCGCCGACGTCTTGGGTAACCGTTTTTTCCTTTTCAACATGCCGCATTGA

Protein sequence

MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLFNMPH

Homology

[Close]

BLAST of CaUC01G002110 vs. NCBI nr
Match: XP_038906705.1 (probable GABA transporter 2 [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.1e-51
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MA+LSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MADLSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           FVCLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FVCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. NCBI nr
Match: XP_004143875.1 (probable GABA transporter 2 [Cucumis sativus] >KGN50030.1 hypothetical protein Csa_000172 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 102/110 (92.73%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MA+LSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MADLSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. NCBI nr
Match: TYK06096.1 (putative GABA transporter 2 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.3e-50
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRF 108
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLGNRF
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRF 107

[Close]

BLAST of CaUC01G002110 vs. NCBI nr
Match: XP_008437380.1 (PREDICTED: probable GABA transporter 2 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 6.2e-49
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. NCBI nr
Match: KAA0042692.1 (putative GABA transporter 2 [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 6.2e-49
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot
Match: Q8L4X4 (Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-39
Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MAELSPPDSF--SKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWG 60
           M +   PD F  ++L SDAGA FVL+SKG+WWHAGFHLTTAIVGP ILTLP+AFRGLGW 
Sbjct: 1   MTDPPRPDPFPVTRLDSDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWW 60

Query: 61  VGFVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           +GFVCLT M  VTFY+YYL+SKVL+  EK GRRHIRFRELAADVLG+    +
Sbjct: 61  LGFVCLTTMGLVTFYAYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFY 112

[Close]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot
Match: F4HW02 (GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-24
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 16  DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSY 75
           DAG+ FVL+SKG WWH GFHLTT+IV P +L+LP+AF+ LGW  G  CL   AAVTFYSY
Sbjct: 19  DAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVTFYSY 78

Query: 76  YLLSKVLELREKQGRRHIRFRELAADVLGNRF 108
            LLS  LE     G R++RFR++A  +L  ++
Sbjct: 79  TLLSLTLEHHASLGNRYLRFRDMAHHILSPKW 110

[Close]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot
Match: Q9C9J0 (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g71680 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 8.6e-09
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 26  KGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELR 85
           + +W+++ FH  TA+VG  +L LPFA   LGWG G V + +  A+TFYS   L ++++L 
Sbjct: 36  EAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYS---LWQMVQLH 95

Query: 86  EK-QGRRHIRFRELAADVLG 105
           E   G+R  R+ EL  +  G
Sbjct: 96  EAVPGKRLDRYPELGQEAFG 112

[Close]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot
Match: Q9SR44 (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 28  QWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELREK 87
           +WW++ FH  TA+VG  +L+LP+A   LGWG G   + +   +TFY+ + + ++ E+   
Sbjct: 32  KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYTLWQMVQMHEM--V 91

Query: 88  QGRRHIRFRELAADVLGNRFFLF 111
            G+R  R+ EL     G +  L+
Sbjct: 92  PGKRFDRYHELGQHAFGEKLGLW 112

[Close]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot
Match: O22719 (Lysine histidine transporter-like 3 OS=Arabidopsis thaliana OX=3702 GN=At1g61270 PE=3 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 29  WWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELREKQ 88
           W+++ FH  TAIVG  +L LP+A   LGWG G V L +   +T Y+++ + ++ E+ E  
Sbjct: 38  WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFE-- 97

Query: 89  GRRHIRFRELAADVLGNRFFLF 111
           G+R  R+ EL     G +  L+
Sbjct: 98  GKRFDRYHELGQAAFGKKLGLY 117

[Close]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL
Match: A0A0A0KK40 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150970 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.5e-51
Identity = 102/110 (92.73%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MA+LSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MADLSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL
Match: A0A5D3C6Y1 (Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001970 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRF 108
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLGNRF
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGNRF 107

[Close]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL
Match: A0A5A7TH10 (Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G001900 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL
Match: A0A1S3ATJ4 (probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103482813 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           M +LSPP SFSKLS+DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MTDLSPPASFSKLSTDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           F+CLTVMAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FLCLTVMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL
Match: A0A6J1ESG7 (probable GABA transporter 2 OS=Cucurbita moschata OX=3662 GN=LOC111435583 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.5e-48
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAELSPPDSFSKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60
           MAEL P +S S+LS DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG
Sbjct: 1   MAELPPAESISELSPDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVG 60

Query: 61  FVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           FVCLT+MAAVTFYSYYLLSKVLEL EKQGRRHIRFRELAADVLG+ + L+
Sbjct: 61  FVCLTIMAAVTFYSYYLLSKVLELCEKQGRRHIRFRELAADVLGSGWMLY 110

[Close]

BLAST of CaUC01G002110 vs. TAIR 10
Match: AT5G41800.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-40
Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MAELSPPDSF--SKLSSDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWG 60
           M +   PD F  ++L SDAGA FVL+SKG+WWHAGFHLTTAIVGP ILTLP+AFRGLGW 
Sbjct: 1   MTDPPRPDPFPVTRLDSDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWW 60

Query: 61  VGFVCLTVMAAVTFYSYYLLSKVLELREKQGRRHIRFRELAADVLGNRFFLF 111
           +GFVCLT M  VTFY+YYL+SKVL+  EK GRRHIRFRELAADVLG+    +
Sbjct: 61  LGFVCLTTMGLVTFYAYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFY 112

[Close]

BLAST of CaUC01G002110 vs. TAIR 10
Match: AT1G08230.2 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-25
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 16  DAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSY 75
           DAG+ FVL+SKG WWH GFHLTT+IV P +L+LP+AF+ LGW  G  CL   AAVTFYSY
Sbjct: 19  DAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVTFYSY 78

Query: 76  YLLSKVLELREKQGRRHIRFRELAADVLGNRF 108
            LLS  LE     G R++RFR++A  +L  ++
Sbjct: 79  TLLSLTLEHHASLGNRYLRFRDMAHHILSPKW 110

[Close]

BLAST of CaUC01G002110 vs. TAIR 10
Match: AT1G71680.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-10
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 26  KGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELR 85
           + +W+++ FH  TA+VG  +L LPFA   LGWG G V + +  A+TFYS   L ++++L 
Sbjct: 36  EAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYS---LWQMVQLH 95

Query: 86  EK-QGRRHIRFRELAADVLG 105
           E   G+R  R+ EL  +  G
Sbjct: 96  EAVPGKRLDRYPELGQEAFG 112

[Close]

BLAST of CaUC01G002110 vs. TAIR 10
Match: AT1G67640.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.0e-10
Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 28  QWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELREK 87
           +WW++ FH  TA+VG  +L+LP+A   LGWG G   + +   +TFY+ + + ++ E+   
Sbjct: 32  KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYTLWQMVQMHEM--V 91

Query: 88  QGRRHIRFRELAADVLGNRFFLF 111
            G+R  R+ EL     G +  L+
Sbjct: 92  PGKRFDRYHELGQHAFGEKLGLW 112

[Close]

BLAST of CaUC01G002110 vs. TAIR 10
Match: AT1G61270.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-09
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 29  WWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELREKQ 88
           W+++ FH  TAIVG  +L LP+A   LGWG G V L +   +T Y+++ + ++ E+ E  
Sbjct: 38  WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFE-- 97

Query: 89  GRRHIRFRELAADVLGNRFFLF 111
           G+R  R+ EL     G +  L+
Sbjct: 98  GKRFDRYHELGQAAFGKKLGLY 117

The following BLAST results are available for this feature:

BLAST of CaUC01G002110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906705.1	5.1e-51	93.64	probable GABA transporter 2 [Benincasa hispida]	[more]
XP_004143875.1	1.1e-50	92.73	probable GABA transporter 2 [Cucumis sativus] >KGN50030.1 hypothetical protein C...	[more]
TYK06096.1	4.3e-50	94.39	putative GABA transporter 2 [Cucumis melo var. makuwa]	[more]
XP_008437380.1	6.2e-49	90.00	PREDICTED: probable GABA transporter 2 [Cucumis melo]	[more]
KAA0042692.1	6.2e-49	90.00	putative GABA transporter 2 [Cucumis melo var. makuwa]	[more]

BLAST of CaUC01G002110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4X4	1.6e-39	70.54	Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV...	[more]
F4HW02	3.2e-24	56.52	GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1	[more]
Q9C9J0	8.6e-09	40.00	Lysine histidine transporter-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g71680...	[more]
Q9SR44	1.1e-08	33.73	Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640...	[more]
O22719	1.5e-08	36.59	Lysine histidine transporter-like 3 OS=Arabidopsis thaliana OX=3702 GN=At1g61270...	[more]

BLAST of CaUC01G002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK40	5.5e-51	92.73	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G150970 PE...	[more]
A0A5D3C6Y1	2.1e-50	94.39	Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TH10	3.0e-49	90.00	Putative GABA transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3ATJ4	3.0e-49	90.00	probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103482813 PE=3 SV=1	[more]
A0A6J1ESG7	7.5e-48	88.18	probable GABA transporter 2 OS=Cucurbita moschata OX=3662 GN=LOC111435583 PE=3 S...	[more]

BLAST of CaUC01G002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41800.1	1.1e-40	70.54	Transmembrane amino acid transporter family protein	[more]
AT1G08230.2	2.3e-25	56.52	Transmembrane amino acid transporter family protein	[more]
AT1G71680.1	6.1e-10	40.00	Transmembrane amino acid transporter family protein	[more]
AT1G67640.1	8.0e-10	33.73	Transmembrane amino acid transporter family protein	[more]
AT1G61270.1	1.0e-09	36.59	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 26..107 e-value: 3.6E-19 score: 68.8
None	No IPR available	PANTHER	PTHR48017:SF54	GABA TRANSPORTER 2-RELATED	coord: 20..108
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 20..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G002110.1	CaUC01G002110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015293	symporter activity