CaUC01G001440 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G001440
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-H2 finger protein ATL46-like
Location	Ciama_Chr01: 1344545 .. 1345054 (+)
RNA-Seq Expression	CaUC01G001440
Synteny	CaUC01G001440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTCCTCTATTTCGCCATTAACACCCAGTTACGCTCTCAAATCCTCCATTTCTTCACCACAATCCTCCTCCAATTGAAGCTTCTCGCCGCCCACTTTGGCCTCCTCAAGCTCTCGCCGGAGCACAACGCTGATTCTCCCTTCGAGCGTCCGACTAGCTACGTCTTCCTCACCGAAGGCCCCTGCCCCTCGCTGGTCACCATTCCGGCCGCCGATTTGCAGGCCAAGATCAAGAAGAGTCTTCCGATCGTTGCGTTTAGGGATTTTGTTGCGAAACAGGGGATGGCAATTGGGGGAACTGAAGATGGTGAAGAGGATCGGAATTGTACGATCTGTTTGTGTGAAATGGAGAGATCGGAGACGATGAGAGAGCTCCCAAATTGCTGCCATGTCTTCCATAGAAAGTGTTTGGATAAGTGGATTGATGAGTTTCAAATTACTTGCCCTGTTTGTAGATCCCTGCTTTTGCCCGCCGGAGAAGGCGATGGGTTCCGATTCTTCAGGTGA

mRNA sequence

ATGGGGTTCCTCTATTTCGCCATTAACACCCAGTTACGCTCTCAAATCCTCCATTTCTTCACCACAATCCTCCTCCAATTGAAGCTTCTCGCCGCCCACTTTGGCCTCCTCAAGCTCTCGCCGGAGCACAACGCTGATTCTCCCTTCGAGCGTCCGACTAGCTACGTCTTCCTCACCGAAGGCCCCTGCCCCTCGCTGGTCACCATTCCGGCCGCCGATTTGCAGGCCAAGATCAAGAAGAGTCTTCCGATCGTTGCGTTTAGGGATTTTGTTGCGAAACAGGGGATGGCAATTGGGGGAACTGAAGATGGTGAAGAGGATCGGAATTGTACGATCTGTTTGTGTGAAATGGAGAGATCGGAGACGATGAGAGAGCTCCCAAATTGCTGCCATGTCTTCCATAGAAAGTGTTTGGATAAGTGGATTGATGAGTTTCAAATTACTTGCCCTGTTTGTAGATCCCTGCTTTTGCCCGCCGGAGAAGGCGATGGGTTCCGATTCTTCAGGTGA

Coding sequence (CDS)

ATGGGGTTCCTCTATTTCGCCATTAACACCCAGTTACGCTCTCAAATCCTCCATTTCTTCACCACAATCCTCCTCCAATTGAAGCTTCTCGCCGCCCACTTTGGCCTCCTCAAGCTCTCGCCGGAGCACAACGCTGATTCTCCCTTCGAGCGTCCGACTAGCTACGTCTTCCTCACCGAAGGCCCCTGCCCCTCGCTGGTCACCATTCCGGCCGCCGATTTGCAGGCCAAGATCAAGAAGAGTCTTCCGATCGTTGCGTTTAGGGATTTTGTTGCGAAACAGGGGATGGCAATTGGGGGAACTGAAGATGGTGAAGAGGATCGGAATTGTACGATCTGTTTGTGTGAAATGGAGAGATCGGAGACGATGAGAGAGCTCCCAAATTGCTGCCATGTCTTCCATAGAAAGTGTTTGGATAAGTGGATTGATGAGTTTCAAATTACTTGCCCTGTTTGTAGATCCCTGCTTTTGCCCGCCGGAGAAGGCGATGGGTTCCGATTCTTCAGGTGA

Protein sequence

MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTEGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR

Homology

[Close]

BLAST of CaUC01G001440 vs. NCBI nr
Match: XP_038907243.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 142/169 (84.02%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTE 60
           MGFLYF+IN  L SQILHFFTTILLQLKLLAAHF LLKLSPEHNADSPF+RPTS+VFLTE
Sbjct: 1   MGFLYFSINAHLCSQILHFFTTILLQLKLLAAHFRLLKLSPEHNADSPFDRPTSFVFLTE 60

Query: 61  GPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERS 120
           GPC SLVT+PAADLQ +IKKSLPIVAFRDF+AKQGM  G  E+ EE+R CT+CLCEMERS
Sbjct: 61  GPCSSLVTVPAADLQGRIKKSLPIVAFRDFIAKQGMEFGENEEDEENRICTVCLCEMERS 120

Query: 121 ETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
           E+MRELPNCCHVFHR+C D WIDEFQITCPVCRSLLLPAGEG GFRFF+
Sbjct: 121 ESMRELPNCCHVFHRECFDAWIDEFQITCPVCRSLLLPAGEGGGFRFFQ 169

[Close]

BLAST of CaUC01G001440 vs. NCBI nr
Match: XP_023520502.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo] >KAG7017057.1 RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65
Identity = 126/169 (74.56%), Postives = 138/169 (81.66%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTE 60
           MGF  FAIN     QILHFFT ILL LKLLAA FGLLK SPEH+ADSPF+ PTSY+FLT+
Sbjct: 1   MGFFCFAINGHRCYQILHFFTRILLHLKLLAARFGLLKPSPEHHADSPFQPPTSYLFLTD 60

Query: 61  GPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERS 120
            PCPSLVT+PAADLQA+IK SLPIV F DF AKQG+  GG +  EE+R CTICL EMERS
Sbjct: 61  DPCPSLVTVPAADLQARIKNSLPIVEFGDFAAKQGIEFGGNDGEEENRMCTICLSEMERS 120

Query: 121 ETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
           E MREL NC HVFHR+CLD WIDEFQITCPVCRS LLP+G+G GFRF R
Sbjct: 121 EPMRELCNCRHVFHRECLDTWIDEFQITCPVCRSFLLPSGDGGGFRFLR 169

[Close]

BLAST of CaUC01G001440 vs. NCBI nr
Match: XP_022996076.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima])

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63
Identity = 126/170 (74.12%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILH-FFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLT 60
           MGFL+FAIN Q  SQILH  FT ILLQ KLLAAHFGL+K SPE  ADSPFERPTSYV LT
Sbjct: 1   MGFLHFAINAQTSSQILHQAFTRILLQFKLLAAHFGLIKPSPELVADSPFERPTSYVLLT 60

Query: 61  EGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMER 120
           EG  PSLVT+PA DLQ +IK SLPI+ + DFV KQG      +  EE+R CTICLCEMER
Sbjct: 61  EGRYPSLVTVPAVDLQVRIKTSLPIIEYGDFVEKQGRGSPENKVDEENRKCTICLCEMER 120

Query: 121 SETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
           SETMREL NCCHVFHR CLD WIDEF+ITCPVCRS+L PAGEGDGF F R
Sbjct: 121 SETMRELCNCCHVFHRDCLDTWIDEFRITCPVCRSMLFPAGEGDGFPFVR 170

[Close]

BLAST of CaUC01G001440 vs. NCBI nr
Match: XP_023533023.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 2.9e-58
Identity = 115/154 (74.68%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTE 60
           MGFL+FAIN Q  SQILH FT ILLQ KLLAAHFGL+K SPEH A+SPFERPTSYV LTE
Sbjct: 1   MGFLHFAINGQRSSQILHLFTRILLQFKLLAAHFGLIKPSPEHVAESPFERPTSYVLLTE 60

Query: 61  GPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERS 120
           G  PSLVT+PA DLQA+IK SLPI+ + DFV KQG      +  EE+R CTICLCEMERS
Sbjct: 61  GRYPSLVTVPAVDLQARIKTSLPIIEYGDFVEKQGRGSPEEKVDEENRKCTICLCEMERS 120

Query: 121 ETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRS 155
           ETMREL NCCHVFH  CLD WIDEF+ITCPVCRS
Sbjct: 121 ETMRELSNCCHVFHPDCLDTWIDEFRITCPVCRS 154

[Close]

BLAST of CaUC01G001440 vs. NCBI nr
Match: XP_022159502.1 (RING-H2 finger protein ATL2-like [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 113/175 (64.57%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPE--HNADSPFERPTSYVFL 60
           MGFLYFAIN    SQILHFFT I  +LK L  + G+LK  P+   +AD   +RPTSYVF+
Sbjct: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60

Query: 61  TEGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAI----GGTEDGEEDRNCTICL 120
           TEG CPSLVT+PA DLQA+IKKSLPIV F DF AK  +         E+ EE   CTICL
Sbjct: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120

Query: 121 CEMERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
            +ME+SE MREL NCCHVFH++CLD WIDEFQITCP+CRS+LLPAGEGDG R+FR
Sbjct: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 175

[Close]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 50/146 (34.25%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 12  LRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTEGPCPSLVTIPA 71
           L + ++ FF  IL+    L A + LL+    H       R  + VF T  P  +  ++ A
Sbjct: 32  LSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVA 91

Query: 72  A-DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPNCC 131
           +  L   + KSLP+  F D            E  ++   C +CL E E SET R LPNC 
Sbjct: 92  SRGLDPNVIKSLPVFTFSD------------ETHKDPIECAVCLSEFEESETGRVLPNCQ 151

Query: 132 HVFHRKCLDKWIDEFQITCPVCRSLL 157
           H FH  C+D W      TCP+CRSL+
Sbjct: 152 HTFHVDCIDMWFHSHS-TCPLCRSLV 164

[Close]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 49/147 (33.33%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 16  ILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSY---VFLTEGPCPSLVTIPAA 75
           IL F  TI+  +      F  L LS     D  +   TSY   +  T  P  +L+     
Sbjct: 22  ILGFIRTIVFSI------FRFLGLSDFLEMDQTWPDYTSYPTRIPETRSPFSALL----- 81

Query: 76  DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEE-DRNCTICLCEMERSETMRELPNCCH 135
                I++ LP++ F +           T  GE+   NC +CL E E  + +R L NC H
Sbjct: 82  -----IREILPVIKFEEL----------TNSGEDLPENCAVCLYEFEGEQEIRWLRNCRH 141

Query: 136 VFHRKCLDKWIDEFQITCPVCRSLLLP 159
           +FHR CLD+W+D  Q TCP+CR+  +P
Sbjct: 142 IFHRSCLDRWMDHDQKTCPLCRTPFVP 142

[Close]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-12
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 69  IPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPN 128
           + A  L A+  ++ P   + +  A + +  GG E       C +CLCE E  ET+R +P 
Sbjct: 102 LTARGLDAEAIETFPTFLYSEVKAVR-IGKGGVE-------CAVCLCEFEDDETLRLMPP 161

Query: 129 CCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGD 164
           CCHVFH  C+D W+ E   TCP+CR+ L+   +GD
Sbjct: 162 CCHVFHADCVDVWLSEHS-TCPLCRADLVLNQQGD 187

[Close]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot
Match: O64762 (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-11
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 59  TEGPCPSLVTIPAA-DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEM 118
           T+    S  +I A   L   I  S P   + + V ++ + IGG E       C +C+CE 
Sbjct: 52  TDSDVESRTSITAVRGLDEAIINSFPTFLYSE-VKERRIGIGGVE-------CAVCICEF 111

Query: 119 ERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCR-SLLLPAGE 162
           E  ET+R +P CCHVFH  C+  W+ +   TCP+CR  L L  GE
Sbjct: 112 EDHETLRLMPECCHVFHADCVSVWLSDHS-TCPLCRVDLCLQPGE 147

[Close]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 104 GEEDRNCTICLCEMERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLP 159
           G+E   C +CL E E  ET+R +P CCHVFH  C+D W+   Q TCP+CR+ L+P
Sbjct: 112 GKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWL-RSQTTCPLCRANLVP 165

[Close]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL
Match: A0A6J1K3P6 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111491392 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.9e-64
Identity = 126/170 (74.12%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILH-FFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLT 60
           MGFL+FAIN Q  SQILH  FT ILLQ KLLAAHFGL+K SPE  ADSPFERPTSYV LT
Sbjct: 1   MGFLHFAINAQTSSQILHQAFTRILLQFKLLAAHFGLIKPSPELVADSPFERPTSYVLLT 60

Query: 61  EGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMER 120
           EG  PSLVT+PA DLQ +IK SLPI+ + DFV KQG      +  EE+R CTICLCEMER
Sbjct: 61  EGRYPSLVTVPAVDLQVRIKTSLPIIEYGDFVEKQGRGSPENKVDEENRKCTICLCEMER 120

Query: 121 SETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
           SETMREL NCCHVFHR CLD WIDEF+ITCPVCRS+L PAGEGDGF F R
Sbjct: 121 SETMRELCNCCHVFHRDCLDTWIDEFRITCPVCRSMLFPAGEGDGFPFVR 170

[Close]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL
Match: A0A6J1E009 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111025900 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.4e-56
Identity = 113/175 (64.57%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQILHFFTTILLQLKLLAAHFGLLKLSPE--HNADSPFERPTSYVFL 60
           MGFLYFAIN    SQILHFFT I  +LK L  + G+LK  P+   +AD   +RPTSYVF+
Sbjct: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60

Query: 61  TEGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAI----GGTEDGEEDRNCTICL 120
           TEG CPSLVT+PA DLQA+IKKSLPIV F DF AK  +         E+ EE   CTICL
Sbjct: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120

Query: 121 CEMERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRFFR 170
            +ME+SE MREL NCCHVFH++CLD WIDEFQITCP+CRS+LLPAGEGDG R+FR
Sbjct: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 175

[Close]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL
Match: A0A2Z7BRP5 (RING-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_14687 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 7.0e-26
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 1   MGFLYFAINTQLRSQI--LHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFL 60
           MGFL+ AI  +L +    L   T +     +     G+ K  PE   + P  R  +Y+F+
Sbjct: 1   MGFLFHAIKIKLPALFTSLDILTHLRFLFTIALTRLGIYKPPPEQQQEDPNSRENNYIFI 60

Query: 61  TEGPCPSLVTIPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEME 120
            +G  PSLV IP   + A IKK +PI+ +RD   +    +G      +   CT+CL  + 
Sbjct: 61  LDGSSPSLVPIPVHTVTAAIKKKVPIIQYRDCAQR----LGEMGSDSDQMVCTVCLECVG 120

Query: 121 RSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGDGFRF 168
            S+ +REL NC HVFHR CLD W+DE Q+TCP+CRS+LLP      + F
Sbjct: 121 LSDEIRELSNCSHVFHRDCLDAWVDEGQVTCPMCRSILLPRPPNSKYAF 165

[Close]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL
Match: A0A5B7BME5 (Putative Brassinosteroid-responsive RING-H2 OS=Davidia involucrata OX=16924 GN=Din_038452 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.2e-24
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 33  HFGLLKLSP---EHNADSPFERPTSYVFLTEGPCPSLVTIPAADLQAKIKKSLPIVAFRD 92
           H G+LK +P   E   +  F    S + + +G  PSLV IP   + A IKK LP++ + D
Sbjct: 29  HLGVLKSNPAAAEEEEEEAFSWGNSVIMMLDGSSPSLVPIPVHAVTAAIKKRLPVLQYGD 88

Query: 93  FVAKQGMAIGGTED--GEEDRNCTICLCEMERSETMRELPNCCHVFHRKCLDKWIDEFQI 152
           F  K+   +   +    EED+ C +CL  +E    +REL NCCHVFHR+CLD W+DE Q+
Sbjct: 89  FKEKRFGIVQQQQQQMEEEDKACAVCLDSIESRHEIRELCNCCHVFHRECLDSWVDEGQL 148

Query: 153 TCPVCRSLLLPA 160
           TCP+CRS+LLP+
Sbjct: 149 TCPLCRSMLLPS 160

[Close]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL
Match: A0A5J5A3P6 (RING-type domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_007066 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 6.5e-24
Identity = 59/133 (44.36%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 25  LQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTEGPCPSLVTIPAADLQAKIKKSLPI 84
           L + +   H GLL  +PE    S  E  T YV + +G  PSLV IP   + A IKK LP+
Sbjct: 315 LMVMMALTHLGLL-TTPEEAFSS--ENSTIYVVMLDGSSPSLVPIPVHVVTAAIKKKLPV 374

Query: 85  VAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPNCCHVFHRKCLDKWIDE 144
           + + D++ ++ +     ++ EE++ C++CL  +E S  +REL NCCHVFHR+CLD W+DE
Sbjct: 375 LQYGDYLLEKRI-----QNEEEEKACSVCLDSIESSHEIRELCNCCHVFHRECLDSWVDE 434

Query: 145 FQITCPVCRSLLL 158
            Q+TCP+CRS+LL
Sbjct: 435 GQVTCPLCRSMLL 439

[Close]

BLAST of CaUC01G001440 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 50/146 (34.25%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 12  LRSQILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSYVFLTEGPCPSLVTIPA 71
           L + ++ FF  IL+    L A + LL+    H       R  + VF T  P  +  ++ A
Sbjct: 32  LSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVA 91

Query: 72  A-DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPNCC 131
           +  L   + KSLP+  F D            E  ++   C +CL E E SET R LPNC 
Sbjct: 92  SRGLDPNVIKSLPVFTFSD------------ETHKDPIECAVCLSEFEESETGRVLPNCQ 151

Query: 132 HVFHRKCLDKWIDEFQITCPVCRSLL 157
           H FH  C+D W      TCP+CRSL+
Sbjct: 152 HTFHVDCIDMWFHSHS-TCPLCRSLV 164

[Close]

BLAST of CaUC01G001440 vs. TAIR 10
Match: AT3G43430.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 78  IKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPNCCHVFHRKC 137
           IK+SL + AFRD V +   AI           C +CL ++E  + +REL NC HVFHR C
Sbjct: 59  IKESLAVSAFRDAVERSPAAINDM--------CAVCLGDLEDEDEIRELRNCTHVFHRDC 118

Query: 138 LDKWI--------DEFQITCPVCRSLLLPA 160
           +D+W+        D+   TCP+CR+ LLP+
Sbjct: 119 IDRWLDYECCGGDDDNHRTCPLCRTPLLPS 140

[Close]

BLAST of CaUC01G001440 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 49/147 (33.33%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 16  ILHFFTTILLQLKLLAAHFGLLKLSPEHNADSPFERPTSY---VFLTEGPCPSLVTIPAA 75
           IL F  TI+  +      F  L LS     D  +   TSY   +  T  P  +L+     
Sbjct: 22  ILGFIRTIVFSI------FRFLGLSDFLEMDQTWPDYTSYPTRIPETRSPFSALL----- 81

Query: 76  DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEE-DRNCTICLCEMERSETMRELPNCCH 135
                I++ LP++ F +           T  GE+   NC +CL E E  + +R L NC H
Sbjct: 82  -----IREILPVIKFEEL----------TNSGEDLPENCAVCLYEFEGEQEIRWLRNCRH 141

Query: 136 VFHRKCLDKWIDEFQITCPVCRSLLLP 159
           +FHR CLD+W+D  Q TCP+CR+  +P
Sbjct: 142 IFHRSCLDRWMDHDQKTCPLCRTPFVP 142

[Close]

BLAST of CaUC01G001440 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 69  IPAADLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEMERSETMRELPN 128
           + A  L A+  ++ P   + +  A + +  GG E       C +CLCE E  ET+R +P 
Sbjct: 102 LTARGLDAEAIETFPTFLYSEVKAVR-IGKGGVE-------CAVCLCEFEDDETLRLMPP 161

Query: 129 CCHVFHRKCLDKWIDEFQITCPVCRSLLLPAGEGD 164
           CCHVFH  C+D W+ E   TCP+CR+ L+   +GD
Sbjct: 162 CCHVFHADCVDVWLSEHS-TCPLCRADLVLNQQGD 187

[Close]

BLAST of CaUC01G001440 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-12
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 59  TEGPCPSLVTIPAA-DLQAKIKKSLPIVAFRDFVAKQGMAIGGTEDGEEDRNCTICLCEM 118
           T+    S  +I A   L   I  S P   + + V ++ + IGG E       C +C+CE 
Sbjct: 52  TDSDVESRTSITAVRGLDEAIINSFPTFLYSE-VKERRIGIGGVE-------CAVCICEF 111

Query: 119 ERSETMRELPNCCHVFHRKCLDKWIDEFQITCPVCR-SLLLPAGE 162
           E  ET+R +P CCHVFH  C+  W+ +   TCP+CR  L L  GE
Sbjct: 112 EDHETLRLMPECCHVFHADCVSVWLSDHS-TCPLCRVDLCLQPGE 147

The following BLAST results are available for this feature:

BLAST of CaUC01G001440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907243.1	1.1e-78	84.02	RING-H2 finger protein ATL2-like [Benincasa hispida]	[more]
XP_023520502.1	1.9e-65	74.56	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo] >KAG7017057.1 RING...	[more]
XP_022996076.1	1.0e-63	74.12	RING-H2 finger protein ATL46-like [Cucurbita maxima]	[more]
XP_023533023.1	2.9e-58	74.68	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022159502.1	1.7e-55	64.57	RING-H2 finger protein ATL2-like [Momordica charantia]	[more]

BLAST of CaUC01G001440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	1.6e-14	34.25	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9XF92	1.5e-12	33.33	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
O64763	2.5e-12	37.89	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]
O64762	2.7e-11	37.14	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
Q9SK92	6.1e-11	50.91	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]

BLAST of CaUC01G001440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K3P6	4.9e-64	74.12	RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111491392 PE...	[more]
A0A6J1E009	8.4e-56	64.57	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111025900 ...	[more]
A0A2Z7BRP5	7.0e-26	38.46	RING-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F51...	[more]
A0A5B7BME5	2.2e-24	43.94	Putative Brassinosteroid-responsive RING-H2 OS=Davidia involucrata OX=16924 GN=D...	[more]
A0A5J5A3P6	6.5e-24	44.36	RING-type domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_007066 ...	[more]

BLAST of CaUC01G001440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	1.1e-15	34.25	TOXICOS EN LEVADURA 2	[more]
AT3G43430.1	4.6e-14	41.11	RING/U-box superfamily protein	[more]
AT3G61460.1	1.0e-13	33.33	brassinosteroid-responsive RING-H2	[more]
AT2G35000.1	1.8e-13	37.89	RING/U-box superfamily protein	[more]
AT2G34990.1	1.9e-12	37.14	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 110..152 e-value: 4.0E-5 score: 33.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 109..153 e-value: 3.4E-11 score: 43.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 110..153 score: 12.238477
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 72..157 e-value: 2.6E-17 score: 64.3
None	No IPR available	PANTHER	PTHR45969:SF35	RING-H2 ZINC FINGER PROTEIN RHA4A-LIKE	coord: 16..158
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 16..158
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 102..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G001440.1	CaUC01G001440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding