CaUC01G001060 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G001060
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RRM domain-containing protein
Location	Ciama_Chr01: 849645 .. 853125 (+)
RNA-Seq Expression	CaUC01G001060
Synteny	CaUC01G001060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCTCGGCAGCGGCGAAGGTGAACAGAAAAATTCCAACCATTTTAATACCAATTCATATTGAATAAACGCCACCTTTGTATATTGCTGGACAATAATGTATACTTTGAAAAGTAGATTGAGTTGGAGGGAGAACGTAGGCGTTTTGAAACGGTAGTTGTGATGCAGATCGATGTGACTTAGAAAAGATCAGTTGATTACTCCCAACTTATCTTATCAATGCTTGGGTTCTTTTAACTTAATTCTAGAATATGTGTTTGGTGTTTTCTATTATATCTGTTGTTGGTTTAGTCGTTAAGTATTTTTGTGTCAATTTGAGTGTCTCCAAATAAGAATTCCTATCTAACTTGTTATTTTAATATATATATATATATAAATTTATGCAGATATGCGTGGCGTCCATAAAGATCCTCATACTTTGTGGAATTGAAACTAACAAATTTGCTATCTTATGGTTATGGTATATTCCTAATCCTTTTCTTTTTAATGCATTTACTTCCTCATTCTGATAATAACTCTCAGTTAAATTGGAGGTCCTTCACACTGTTTTCTATAAAATACATGTTGTTTGAACCACCACTCTTTTCTTCTCCTTATTTATCATTTACCACCTTTTTCCTTATTGGAGATTGGTGGAAAACTTTGGTGTTCAATGGCTGGCCAGATCACTTCTTCATGCTAAAGTCGAAAGCCCTCAAGGAGAAGTTAAGTGTTGGAACAGATAGATATTTTCCAAATGTGTTTGTCGAAATGAAAGAGCTAAAAGACAAACTAGTGTCCCTGGATTCTCTAGAGGAAGTTGGTAAATTGGATGAGAGGAGCATTAACCAAGATTCAACCTGAAAAACAGTCTTCCTGGATTGACATTAAAAGGGGAAAGATTTGAGAGATATAGATGCTAACAAACATGGCTCAGGGAGGGAGATGAAAATTTTGGGTGTTCCCTCAAAGTTATGGCTGTTACTTTAGTTAGAAGGAAGGAGAATCTGAGCTATTTTATTTTGATGAGAGGAATTTAATCACTGACAAGGGGATAGATCTTGAATTCTTTTATAACTTTTTCCAATAACTTGACAGTGGGGAAAAGATTCTTACCCGAGTGCTAGAATTGAAATTTTATCTCCTTTGAAGAGAGTATCAGACTTGGGTAAAACTTCATAGAGGAAGATATTTTAGAGTAGTTTCTCCTGGAGTGGCAAAGTCCTGGACACTGATATGCCTTTGGATCTAAAGTCTTGGAACATCATCAAAGATAATCTTGTGGCTTTTTCCTAAGATTTTCCTCCAGACTAGAATTTCTCATGTTAGAATTAATGAAACTCTTACCTGCTTCATTCCAAAAAGAGTATTGTTCTGGTGGTCAAGGACATTAGACCTTATATATTTGACAAGTGACAACTAGTCCTTACTCAAGGTGTTGACTAAGATTTTGGCTGACATGGGGCTTCCTTAGATTATTACTGAATATGCATGCAGTCCCCTAAGTTTTTTCCTGGATACCAATTGAGAGGACAAATCTTGATTCCAAATGGAGAACGTGGATTTGAGAGGATATCTTCATCTTACAGACTTCTTTAACTTTCTTAGTGGGAAGCCAAGAGGGAGCTTGTAGCCATATGTGGGTCGAATCAAGTTGGCCAACCATATCCGACAGTTTGACTGGACCTTATTTTTGAGAGTTTTGGGGATAAATTTCATTCTGGGCTTCGATGGGAGGTTGAGTAGTATGAAAGACTAAAGAGAACATTTTGAATTTGAGGATTTTACATATTTTTGAGATAATGCTACTTTTGTTGATTCTTTTGGAGGTTCTTGTCCAAAGCATTTTTTAACTATTTTCTCTCCTTTTGGAACCCGGAGTGCCCTCTTTTATGCTCCTAGAGCCACCCCCTGCCACCAAAAATTAAAAAGAAAGGGAAAAAAGTTATCTCAGGTGGAGAATGTTAGTGAAGTCAAACTTATCGCTACTTTAAGCATTTTGCTGAAACCATCCTATGAACAGTCTTCTGTTTGGTATTTGATTCTGCTTTCTTATTTTTAGATTCTTTGTCCACTTAATCTTGTGGGCTGCTCCATCAGCATCCAACCTAACGCATTCACATTATTCTATACTACAACCATATACATAACGGTAATATATTGAGAAAAACCTTTTAGTTATACGTTAATTTCTTGAGCCTTAATGTGCTTAGTCTAGTCATATTTTGTTTCCACGTGTGAATTCTCTATTAATATAAAGTATAAGGTTCAAATATCAGTTTAATTTAATGGTTCAACACAGATTCTGGATCTCTCGAGTATATTCTTTCGTCTAAAGCCTATAAAATTGAAGACTTTTTTGCTTCTGATGCGGTGGTATTTAAGTGAGCTTCTGTAGACATTCCCCCCCCCCCCTTCCCCTTCTAGCTGTGAAGATATAACACTATTTACAATTTTATGAAATTACTGCCACAGGATTCAAATGGTTTTGTGGACGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAGTAAGGAAAATTACCGTCCCAGCATCTGCAATGTATTTGTCTTCCATTTTTCCCTCTTCTATATTGAAGTTTGAATCAACTTGTTTCAGAGCGGCTCTCATTAAACTGTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACTCGTGGGCCAAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAATACAGCTCCAAGGAGGTAAGTTGCTTGGTTTACCCCTTAATATAGCCTCTGTCAAGCAACTCCTTATTTTTGCTTGTAAAGTGAGTATGCAGGAAGCTAAACTGGCTAAAGAGAAGATGCATGGAAAATTGGCTTGCGGTCGTCCGTTGGTCGTCCGCCTTGCTAGTGAAAAGTTCATGACCAACACAACAAATGATACTTCAAAAGCAGCAGGCGAGTCAAGTAAATCGAGACTCGGTGGCAGCAATTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACAGAAGCAAGATAATATCAGTTGCGAAAAGTCATCGCTCAAGACATCCTGATGTTGAAGAAAACCGATATTGGTAGCTTGTGTTTACCCAAATCTCTTCTACTATTACCAATCCTCTTTAGGAAAATCTGATGCATGGTGTTAAAGTTTAAATATGATGCTGACATATACATAGCCTGGTCGTTTTTCTTTCTTTATTTTTGGGCAACAAAGTGTGGGAAATCAAAATTGGGATGTATCACAGAACACCGCAATGAAAGAGAATTGCAAAAATATTTTAATTCATATTTAGATGATAATTAGAAGTTATTAAGGCATGTAGGTATGGTCCACCTGGGATGGGTTTTGCCTTACTTTTTGCCAATGCTGACGTTAAATTCGGATGAAATTATCAAAAAAGGAATTTGGAGC

mRNA sequence

TCTTTCTCGGCAGCGGCGAAGATATGCGTGGCGTCCATAAAGATCCTCATACTTTGTGGAATTGAAACTAACAAATTTGCTATCTTATGGTTATGGGAGGGAGATGAAAATTTTGGGTGTTCCCTCAAAGTTATGGCTGTTACTTTATGGGAAGCCAAGAGGGAGCTTGTAGCCATATGTGGGTCGAATCAAGTTGGCCAACCATATCCGACAATTCTTTGTCCACTTAATCTTGTGGGCTGCTCCATCAGCATCCAACCTAACGCATTCACATTATTCTATACTACAACCATATACATAACGGATTCAAATGGTTTTGTGGACGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAAGCGGCTCTCATTAAACTGTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACTCGTGGGCCAAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAATACAGCTCCAAGGAGGAAGCTAAACTGGCTAAAGAGAAGATGCATGGAAAATTGGCTTGCGGTCGTCCGTTGGTCGTCCGCCTTGCTAGTGAAAAGTTCATGACCAACACAACAAATGATACTTCAAAAGCAGCAGGCGAGTCAAGTAAATCGAGACTCGGTGGCAGCAATTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACAGAAGCAAGATAATATCAGTTGCGAAAAGTCATCGCTCAAGACATCCTGATGTTGAAGAAAACCGATATTGGTAGCTTGTGTTTACCCAAATCTCTTCTACTATTACCAATCCTCTTTAGGAAAATCTGATGCATGGTGTTAAAGTTTAAATATGATGCTGACATATACATAGCCTGGTCGTTTTTCTTTCTTTATTTTTGGGCAACAAAGTGTGGGAAATCAAAATTGGGATGTATCACAGAACACCGCAATGAAAGAGAATTGCAAAAATATTTTAATTCATATTTAGATGATAATTAGAAGTTATTAAGGCATGTAGGTATGGTCCACCTGGGATGGGTTTTGCCTTACTTTTTGCCAATGCTGACGTTAAATTCGGATGAAATTATCAAAAAAGGAATTTGGAGC

Coding sequence (CDS)

TCTTTCTCGGCAGCGGCGAAGATATGCGTGGCGTCCATAAAGATCCTCATACTTTGTGGAATTGAAACTAACAAATTTGCTATCTTATGGTTATGGGAGGGAGATGAAAATTTTGGGTGTTCCCTCAAAGTTATGGCTGTTACTTTATGGGAAGCCAAGAGGGAGCTTGTAGCCATATGTGGGTCGAATCAAGTTGGCCAACCATATCCGACAATTCTTTGTCCACTTAATCTTGTGGGCTGCTCCATCAGCATCCAACCTAACGCATTCACATTATTCTATACTACAACCATATACATAACGGATTCAAATGGTTTTGTGGACGAGAAGTGTGAAAGCAAACTTTATATTGGCAATCTTGACCTCAGAATTACGGAAGCGGCTCTCATTAAACTGTTCTCTCCTTTTGGGAAGATAATATCTGAGGATTTCTTGTGGCACACTCGTGGGCCAAAGCGTGGAGAGCCACGAGGATTTGCCTTCATCGAATACAGCTCCAAGGAGGAAGCTAAACTGGCTAAAGAGAAGATGCATGGAAAATTGGCTTGCGGTCGTCCGTTGGTCGTCCGCCTTGCTAGTGAAAAGTTCATGACCAACACAACAAATGATACTTCAAAAGCAGCAGGCGAGTCAAGTAAATCGAGACTCGGTGGCAGCAATTATGGACAGTTGACTCGCAGCGATAAGATTGCTGCCATAAAGAATAAATTGAGAGCTTTGGAAGGAGGTGGGGAGAGCTCTAGTGTGAAAAAACAGAAGCAAGATAATATCAGTTGCGAAAAGTCATCGCTCAAGACATCCTGA

Protein sequence

SFSAAAKICVASIKILILCGIETNKFAILWLWEGDENFGCSLKVMAVTLWEAKRELVAICGSNQVGQPYPTILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNISCEKSSLKTS

Homology

[Close]

BLAST of CaUC01G001060 vs. NCBI nr
Match: KAA0042597.1 (putative RNA-binding protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 3.6e-79
Identity = 173/244 (70.90%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 28  ILWLWEGDENFGCSLKVMAVTLWEAKRELVAICGSNQVGQPYPTILCPLNLVGCSISIQP 87
           I+ L +GDENFGCS KV AV+L E + E                                
Sbjct: 4   IMALRQGDENFGCSFKVKAVSLVEKEGE-------------------------------- 63

Query: 88  NAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 147
                         DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH
Sbjct: 64  ------------TEDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 123

Query: 148 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKA 207
           TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK M NT NDTSKA
Sbjct: 124 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKA 183

Query: 208 AGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNIS----CEKSS 267
           A ES KSRLGGS+YGQLTRSDKIAAIKNKLRALEGGGESSSVKK KQDNIS     +KS 
Sbjct: 184 ASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSF 203

[Close]

BLAST of CaUC01G001060 vs. NCBI nr
Match: XP_022958043.1 (probable RNA-binding protein 18 isoform X1 [Cucurbita moschata] >XP_022958045.1 probable RNA-binding protein 18 isoform X1 [Cucurbita moschata] >XP_022958048.1 probable RNA-binding protein 18 isoform X1 [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 4.7e-79
Identity = 159/194 (81.96%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 72  ILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIK 131
           ILCPL+LV C I IQPNA  LFYTT I I DS+GFVDEKCESKLYIGNLDLRITEAALIK
Sbjct: 4   ILCPLSLVVCHIGIQPNALALFYTTAIDIVDSSGFVDEKCESKLYIGNLDLRITEAALIK 63

Query: 132 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 191
           +FSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE MHGKLAC RPLVVRL
Sbjct: 64  MFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRL 123

Query: 192 ASEKFMTNTT--NDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGG-GESSS 251
           ASEK + NTT  N+TS+AAGE+SKSR  GSNYG ++RSDKIAAIKNKLRALEGG GE S 
Sbjct: 124 ASEKLVINTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG 183

Query: 252 VKKQKQDNISCEKS 263
           VKKQKQ  +SC  +
Sbjct: 184 VKKQKQGQVSCRNN 197

[Close]

BLAST of CaUC01G001060 vs. NCBI nr
Match: XP_022996007.1 (probable RNA-binding protein 18 isoform X1 [Cucurbita maxima] >XP_022996008.1 probable RNA-binding protein 18 isoform X1 [Cucurbita maxima] >XP_022996009.1 probable RNA-binding protein 18 isoform X1 [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-78
Identity = 158/196 (80.61%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 72  ILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIK 131
           ILCPL+LV C I IQPNA  LFYTT I I DS+GFVDEKCESKLYIGNLDLRITEAALIK
Sbjct: 4   ILCPLSLVVCHIGIQPNALALFYTTAIDIVDSSGFVDEKCESKLYIGNLDLRITEAALIK 63

Query: 132 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 191
           +FSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE MHGKLAC RPLVVRL
Sbjct: 64  MFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKENMHGKLACSRPLVVRL 123

Query: 192 ASEKFMTNTT----NDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGG-GES 251
           ASEK M NTT    N+TS+ AGE+SKSR  GSNYG ++RSDKIAAIKNKLRALEGG GE 
Sbjct: 124 ASEKLMINTTNNNNNNTSRTAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGER 183

Query: 252 SSVKKQKQDNISCEKS 263
           S +KKQKQ  +SC  +
Sbjct: 184 SGMKKQKQGQVSCRNN 199

[Close]

BLAST of CaUC01G001060 vs. NCBI nr
Match: XP_023534514.1 (probable RNA-binding protein 18 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023534516.1 probable RNA-binding protein 18 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 5.7e-77
Identity = 155/194 (79.90%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 72  ILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIK 131
           I+CPL+LV C I IQPNA  L YTT I I DS+GFVDEKCESKLYIGNLDLRITEAALIK
Sbjct: 4   IICPLSLVVCHIGIQPNALALCYTTAIDIVDSSGFVDEKCESKLYIGNLDLRITEAALIK 63

Query: 132 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 191
           +FSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE MHGKLAC RPLVVRL
Sbjct: 64  MFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKENMHGKLACSRPLVVRL 123

Query: 192 ASEKFMTNTT--NDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGG-GESSS 251
           ASEK + NTT  N+TS+  GE+SKSR  GSNYG ++RSDKIAAIKNKLRALEGG GE S 
Sbjct: 124 ASEKLVINTTNNNNTSRTTGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG 183

Query: 252 VKKQKQDNISCEKS 263
           VKKQKQ  +SC  +
Sbjct: 184 VKKQKQGQVSCRNN 197

[Close]

BLAST of CaUC01G001060 vs. NCBI nr
Match: XP_038875193.1 (probable RNA-binding protein 18 [Benincasa hispida] >XP_038875194.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875195.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875196.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875197.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875198.1 probable RNA-binding protein 18 [Benincasa hispida] >XP_038875199.1 probable RNA-binding protein 18 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 7.4e-77
Identity = 149/158 (94.30%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 100 ITDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGF 159
           + DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSP+GKIISEDFLWHTRGPKRGEPRGF
Sbjct: 2   VMDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPYGKIISEDFLWHTRGPKRGEPRGF 61

Query: 160 AFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKAAGESSKSRLGGS 219
           AFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASE+F+TNTTNDTS+AAGESSKSRLGGS
Sbjct: 62  AFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASERFITNTTNDTSRAAGESSKSRLGGS 121

Query: 220 NYGQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNI 258
           NY Q+TRSDKIAAIKNKLRALEGGGESSSVKKQKQDN+
Sbjct: 122 NYRQMTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNM 159

[Close]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot
Match: Q6PBM8 (Probable RNA-binding protein 18 OS=Danio rerio OX=7955 GN=rbm18 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.6e-16
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 114 KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 173
           +L+IGN+D +ITE  L+KL   FGK+   DFL+H  GP  G+PRG+ F+ + +KEEA+ A
Sbjct: 24  RLWIGNIDPKITEYHLVKLLEKFGKVKQFDFLFHKSGPLEGQPRGYCFVNFHTKEEAERA 83

Query: 174 KEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKAAGESSKSRLGGSNYGQLTRSDKIAAI 233
            + ++GKLA  + LVVR A  +       + +  A     S         L+ + KI AI
Sbjct: 84  IQCLNGKLALSKKLVVRWAHAQRFEPFRGEKNMPASLEPSSSEAEDLPTSLSVNAKIRAI 143

Query: 234 KNKLRALE 242
           + KL+ +E
Sbjct: 144 EAKLQMME 151

[Close]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot
Match: Q9CR83 (Probable RNA-binding protein 18 OS=Mus musculus OX=10090 GN=Rbm18 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.4e-15
Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 114 KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 173
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 174 KEKMHGKLACGRPLVVRLASEKFMTNTTNDTSK----AAGESSKSRLGGSNYGQLTRSDK 233
            + ++GKLA  + LVVR A  +      N   K    +   SS +    SN   L+ + K
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPAQSN---LSVTAK 145

Query: 234 IAAIKNKLRAL 241
           I AI+ KL+ +
Sbjct: 146 IKAIEAKLKMM 153

[Close]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot
Match: Q96H35 (Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 114 KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 173
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 174 KEKMHGKLACGRPLVVRLASEKFMTNTTNDTSK----AAGESSKSRLGGSNYGQLTRSDK 233
            + ++GKLA  + LVVR A  +      N   K    +   SS +    SN   L+ + K
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPTQSN---LSVTAK 145

Query: 234 IAAIKNKLRAL 241
           I AI+ KL+ +
Sbjct: 146 IKAIEAKLKMM 153

[Close]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot
Match: Q5R6W3 (Probable RNA-binding protein 18 OS=Pongo abelii OX=9601 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 114 KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 173
           +L+IGNLD +ITE  L+KL   FGK+   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 174 KEKMHGKLACGRPLVVRLASEKFMTNTTNDTSK----AAGESSKSRLGGSNYGQLTRSDK 233
            + ++GKLA  + LVVR A  +      N   K    +   SS +    SN   L+ + K
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPTQSN---LSVTAK 145

Query: 234 IAAIKNKLRAL 241
           I AI+ KL+ +
Sbjct: 146 IKAIEAKLKMM 153

[Close]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot
Match: Q3ZCC5 (Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM18 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.3e-14
Identity = 49/131 (37.40%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 114 KLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLA 173
           +L+IGNLD +ITE  L++L   FG +   DFL+H  G   G+PRG+ F+ + +K+EA+ A
Sbjct: 26  RLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNFETKQEAEQA 85

Query: 174 KEKMHGKLACGRPLVVRLASEKFMTNTTNDTSK----AAGESSKSRLGGSNYGQLTRSDK 233
            + ++GKLA  + LVVR A  +      N   K    +   SS +    SN   L+ + K
Sbjct: 86  IQCLNGKLALSKKLVVRWAHAQVKRYDHNKNDKILPISLEPSSSTEPAQSN---LSVTAK 145

Query: 234 IAAIKNKLRAL 241
           I AI+ KL+ +
Sbjct: 146 IKAIEAKLKMM 153

[Close]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL
Match: A0A5A7TLJ6 (Putative RNA-binding protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00930 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.7e-79
Identity = 173/244 (70.90%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 28  ILWLWEGDENFGCSLKVMAVTLWEAKRELVAICGSNQVGQPYPTILCPLNLVGCSISIQP 87
           I+ L +GDENFGCS KV AV+L E + E                                
Sbjct: 4   IMALRQGDENFGCSFKVKAVSLVEKEGE-------------------------------- 63

Query: 88  NAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 147
                         DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH
Sbjct: 64  ------------TEDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 123

Query: 148 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKA 207
           TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK M NT NDTSKA
Sbjct: 124 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKA 183

Query: 208 AGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNIS----CEKSS 267
           A ES KSRLGGS+YGQLTRSDKIAAIKNKLRALEGGGESSSVKK KQDNIS     +KS 
Sbjct: 184 ASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSF 203

[Close]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL
Match: A0A6J1H211 (probable RNA-binding protein 18 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459395 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.3e-79
Identity = 159/194 (81.96%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 72  ILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIK 131
           ILCPL+LV C I IQPNA  LFYTT I I DS+GFVDEKCESKLYIGNLDLRITEAALIK
Sbjct: 4   ILCPLSLVVCHIGIQPNALALFYTTAIDIVDSSGFVDEKCESKLYIGNLDLRITEAALIK 63

Query: 132 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 191
           +FSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE MHGKLAC RPLVVRL
Sbjct: 64  MFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKESMHGKLACSRPLVVRL 123

Query: 192 ASEKFMTNTT--NDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGG-GESSS 251
           ASEK + NTT  N+TS+AAGE+SKSR  GSNYG ++RSDKIAAIKNKLRALEGG GE S 
Sbjct: 124 ASEKLVINTTNNNNTSRAAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGERSG 183

Query: 252 VKKQKQDNISCEKS 263
           VKKQKQ  +SC  +
Sbjct: 184 VKKQKQGQVSCRNN 197

[Close]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL
Match: A0A6J1K0K5 (probable RNA-binding protein 18 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491348 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.6e-79
Identity = 158/196 (80.61%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 72  ILCPLNLVGCSISIQPNAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIK 131
           ILCPL+LV C I IQPNA  LFYTT I I DS+GFVDEKCESKLYIGNLDLRITEAALIK
Sbjct: 4   ILCPLSLVVCHIGIQPNALALFYTTAIDIVDSSGFVDEKCESKLYIGNLDLRITEAALIK 63

Query: 132 LFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRL 191
           +FSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKE MHGKLAC RPLVVRL
Sbjct: 64  MFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAKENMHGKLACSRPLVVRL 123

Query: 192 ASEKFMTNTT----NDTSKAAGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGG-GES 251
           ASEK M NTT    N+TS+ AGE+SKSR  GSNYG ++RSDKIAAIKNKLRALEGG GE 
Sbjct: 124 ASEKLMINTTNNNNNNTSRTAGETSKSRPSGSNYGHMSRSDKIAAIKNKLRALEGGEGER 183

Query: 252 SSVKKQKQDNISCEKS 263
           S +KKQKQ  +SC  +
Sbjct: 184 SGMKKQKQGQVSCRNN 199

[Close]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL
Match: A0A0A0KJM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140500 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 4.3e-78
Identity = 171/244 (70.08%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 28  ILWLWEGDENFGCSLKVMAVTLWEAKRELVAICGSNQVGQPYPTILCPLNLVGCSISIQP 87
           I+ L +GDENFG S K+ AV+L E + E                                
Sbjct: 4   IMALRQGDENFGPSFKIKAVSLVEKEGE-------------------------------- 63

Query: 88  NAFTLFYTTTIYITDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 147
                         DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH
Sbjct: 64  ------------SEDSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWH 123

Query: 148 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKA 207
           TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK MTNTTNDTS+ 
Sbjct: 124 TRGPKRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMTNTTNDTSRT 183

Query: 208 AGESSKSRLGGSNYGQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNISC----EKSS 267
           A ES KSRLGGS+YGQLTRSDKIAAIKNKLRALEGGGESSSVKK KQDNIS     +KSS
Sbjct: 184 ASESRKSRLGGSSYGQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISYKDHNDKSS 203

[Close]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL
Match: A0A1S3ATX2 (probable RNA-binding protein 18 OS=Cucumis melo OX=3656 GN=LOC103482914 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.0e-76
Identity = 156/170 (91.76%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 102 DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 161
           DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 162 IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKFMTNTTNDTSKAAGESSKSRLGGSNY 221
           IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEK M NT NDTSKAA ES KSRLGGS+Y
Sbjct: 62  IEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMVNTANDTSKAASESRKSRLGGSSY 121

Query: 222 GQLTRSDKIAAIKNKLRALEGGGESSSVKKQKQDNIS----CEKSSLKTS 268
           GQLTRSDKIAAIKNKLRALEGGGESSSVKK KQDNIS     +KS LKTS
Sbjct: 122 GQLTRSDKIAAIKNKLRALEGGGESSSVKKPKQDNISFKDHIDKSFLKTS 171

[Close]

BLAST of CaUC01G001060 vs. TAIR 10
Match: AT5G52545.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-13
Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 177 MHGKLACGRPLVVRLASEKFMTNTTNDTSK-AAGESSKSR-LGGSNYGQLTRSDKIAAIK 236
           MHG+LACGRPLVVRLASEK + ++++D SK +  E +++R + GS+ GQ++R +K+ AIK
Sbjct: 1   MHGRLACGRPLVVRLASEKHLEDSSHDHSKRSLPEGNRTRFVNGSSSGQMSRDEKVTAIK 60

Query: 237 NKLRALEGGGESSSVKKQK 254
           NKL+ALE   E    KKQK
Sbjct: 61  NKLKALE-EDEKRDPKKQK 78

[Close]

BLAST of CaUC01G001060 vs. TAIR 10
Match: AT3G16380.1 (poly(A) binding protein 6 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 113 SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 172
           S LY+ NL   + E  L ++F  +G+I+S   + H    + G  +GF F+ +S+ EE+K 
Sbjct: 304 SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCH----ENGRSKGFGFVCFSNCEESKQ 363

Query: 173 AKEKMHGKLACGRPLVVRLASEK 196
           AK  ++G L  G+P+VVR+A  K
Sbjct: 364 AKRYLNGFLVDGKPIVVRVAERK 382

[Close]

BLAST of CaUC01G001060 vs. TAIR 10
Match: AT1G71770.1 (poly(A)-binding protein 5 )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 113 SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 172
           S LY+ NLD  + +  L ++FS +G + S   + +++G      RGF F+ YS+ EEA L
Sbjct: 342 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLS----RGFGFVAYSNPEEALL 401

Query: 173 AKEKMHGKLACGRPLVVRLASEK 196
           A ++M+GK+   +PL V LA  K
Sbjct: 402 AMKEMNGKMIGRKPLYVALAQRK 420

[Close]

BLAST of CaUC01G001060 vs. TAIR 10
Match: AT1G71770.2 (poly(A)-binding protein 5 )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 113 SKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKL 172
           S LY+ NLD  + +  L ++FS +G + S   + +++G      RGF F+ YS+ EEA L
Sbjct: 342 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLS----RGFGFVAYSNPEEALL 401

Query: 173 AKEKMHGKLACGRPLVVRLASEK 196
           A ++M+GK+   +PL V LA  K
Sbjct: 402 AMKEMNGKMIGRKPLYVALAQRK 420

[Close]

BLAST of CaUC01G001060 vs. TAIR 10
Match: AT1G34140.1 (poly(A) binding protein 1 )

HSP 1 Score: 56.2 bits (134), Expect = 4.6e-08
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 115 LYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAFIEYSSKEEAKLAK 174
           LY+ NLD  +    L +LFS FG I S   + H+ G      +G  F+E+S+ EEA  A 
Sbjct: 225 LYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGIS----KGVGFVEFSTSEEASKAM 284

Query: 175 EKMHGKLACGRPLVVRLASEK 196
            KM+GK+   +P+ V LA  K
Sbjct: 285 LKMNGKMVGNKPIYVSLAQCK 301

The following BLAST results are available for this feature:

BLAST of CaUC01G001060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042597.1	3.6e-79	70.90	putative RNA-binding protein 18 [Cucumis melo var. makuwa]	[more]
XP_022958043.1	4.7e-79	81.96	probable RNA-binding protein 18 isoform X1 [Cucurbita moschata] >XP_022958045.1 ...	[more]
XP_022996007.1	1.8e-78	80.61	probable RNA-binding protein 18 isoform X1 [Cucurbita maxima] >XP_022996008.1 pr...	[more]
XP_023534514.1	5.7e-77	79.90	probable RNA-binding protein 18 isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_038875193.1	7.4e-77	94.30	probable RNA-binding protein 18 [Benincasa hispida] >XP_038875194.1 probable RNA...	[more]

BLAST of CaUC01G001060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PBM8	7.6e-16	38.28	Probable RNA-binding protein 18 OS=Danio rerio OX=7955 GN=rbm18 PE=2 SV=1	[more]
Q9CR83	8.4e-15	38.93	Probable RNA-binding protein 18 OS=Mus musculus OX=10090 GN=Rbm18 PE=2 SV=1	[more]
Q96H35	1.4e-14	38.93	Probable RNA-binding protein 18 OS=Homo sapiens OX=9606 GN=RBM18 PE=2 SV=1	[more]
Q5R6W3	1.4e-14	38.93	Probable RNA-binding protein 18 OS=Pongo abelii OX=9601 GN=RBM18 PE=2 SV=1	[more]
Q3ZCC5	9.3e-14	37.40	Probable RNA-binding protein 18 OS=Bos taurus OX=9913 GN=RBM18 PE=2 SV=1	[more]

BLAST of CaUC01G001060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLJ6	1.7e-79	70.90	Putative RNA-binding protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1H211	2.3e-79	81.96	probable RNA-binding protein 18 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K0K5	8.6e-79	80.61	probable RNA-binding protein 18 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0KJM9	4.3e-78	70.08	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140500 PE=4 SV...	[more]
A0A1S3ATX2	1.0e-76	91.76	probable RNA-binding protein 18 OS=Cucumis melo OX=3656 GN=LOC103482914 PE=4 SV=...	[more]

BLAST of CaUC01G001060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52545.1	8.1e-13	54.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G16380.1	1.9e-09	37.35	poly(A) binding protein 6	[more]
AT1G71770.1	2.4e-09	38.55	poly(A)-binding protein 5	[more]
AT1G71770.2	2.4e-09	38.55	poly(A)-binding protein 5	[more]
AT1G34140.1	4.6e-08	39.51	poly(A) binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 114..190 e-value: 2.8E-20 score: 83.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 115..187 e-value: 4.5E-14 score: 52.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..194 score: 16.858295
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 110..206 e-value: 4.3E-22 score: 80.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..267
None	No IPR available	PANTHER	PTHR21245	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN	coord: 104..262
None	No IPR available	PANTHER	PTHR21245:SF2	RNA-BINDING PROTEIN 18-RELATED	coord: 104..262
IPR039157	RNA-binding protein 18, RNA recognition motif	CDD	cd12355	RRM_RBM18	coord: 114..193 e-value: 1.83405E-31 score: 109.673
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 106..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC01G001060.1	CaUC01G001060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding