CaUC01G000560 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G000560
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNADH-dependent glutamate synthase 1 isoform 1
LocationCiama_Chr01: 413196 .. 419775 (-)
RNA-Seq ExpressionCaUC01G000560
SyntenyCaUC01G000560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGATCTCGAAGAAACGCATACAGTTCGGGAAATGAATTTACAGAAAAAACGAAACAAGATCTCAGATTAAAGAAAACAAAGGTCATCAAATTGAGTTTCAGAAATCATATCATCCTAAGATCTTGTTCACAATCTAACCTCGAAATGTCAGAAATCGTAGCACCGACCGTTTCGTTCCCAATCGCCGTAGCGGGTGGGCTCGGGGCCTTTAGGTCCACCGACCTCGCCGGTCGCTTCTTTTATATCAACTCCTTCATCTTCACCGTCTCGGTCATCTATGGCAGCCTCGTGTTGATTCGGCAAACTTCCTTTCCCGGCCTCTCGTTGTTCCTCGCTAGACACACCTTGCTCCGATCGAGAAGGTTGTTGATTGGACGAGGAGCTAACGAGCCGGCTCAACGAGTTGGCAGTCAGGCGACTCGCCGCCGGTAGCGCGGAGAGAGTCGGCGGCGACGAGAATAGACGGCTGAGATTGCTCGACATTCTTTGTTACTCGATCGGATCTGCGAACTGCCGGCGGTTGGTGTGTGAGAATATCGTATTTATAGTCCTACGATACGACATCGTGTCGGACAACAAAACCACCACGTGTTATTGTTTCAACGGAGTTAGCCCTAAACTTTTAAAACTTATTTCGTTGCCCTTAATTTTTCTTGAACATTTCGAAATTACCCTTATTCTTGGGGGTGTAAGTTCGGGATCAAAAAGCCTGTTAATTAAATGCCTGGGATTTATTTGAAGAATTTTGAAGCCTGTTTGTCAAGGGTCGATCCCAAAAGTAAACCGACGATTGTTGCCGATGACCACTAATAAAGATGTAGTCGTAGGGATGATAAAATTCCCGATGGGTCGAGTCCCGCGGGAAATTCCCGGATTGACCAGGTACGGGTATTGGGTCCTGGCCGCAAATCGACCCCTACCCCCACCTCGATTTTTCTAGTTATGCATTTATATATATATATATAATAAATAAATAAACTAAAACAGTAGCGGTTTTGTTAACATTATTTTCTAATAAAATAAATCTAAATTTTATTAAATTCTCGACCCGACCCCGACTCCCACAAATGGAAAATGGTGCAGGGAGGGGATTAAAAGTCCACCCGAGACAAGGATGGAGAGTGTATCCCGACCCTGCCTCGCCCAACTGTCATCCTTGGATGTAAGAGATGAAGAAAAATTTTCTCTCAAACCTATCACATTTCTTATAAAACATATTCCAAACCTATGGATTTAATTTCTTAATTACATGATTTTTATTCCAATGGATTAACACATGAGGTTTGGCTTCAAATGCCGCACTCCCCGATCCCAAAAGCCAAATACTCTCTAGGTGCAAATACTTCAAATTCAACTACAAATAGATTTGAAAATTGAAATTATGAAAATTTACATTATTTTAGGTTATTCTCACACTATTTCAGGTTTAAAATTTTGTTTAAGGGTTAAAAAATTCCCACTTCAATAATAGTTTTCGACACTTTTTCCATTTAGTTTGTAGATTTCAAAATGTTACCCTTTTAGTTATTAAGTTTTGAATTTAGTTTCAATTTAGGGTTCGTTTATATCAACTTGAGAAAAAAATGTTTTTTGAAAAAAACTCATTTTTATTTAAACTATTTTGATAAAATTTGTTTAAAATACACTTCAAAATTTATTTTGAAGGGTTGTCAAACATTCCAATTTTTCTTCAAAATTATTTATTTTTTAAATTAAACACGTTAAATGTATTCCAAACACAATCTTAGTCTCTAGGTTTCAAAATGTTACAATTTTTTTCTTGACATTTGAGTTTGTTTCAATTTAGTCCTTAGTTTTCAAAACTTACACTTTTAACTTGTAATTTTCACTAAATACATGAAACAAAATTCAAATCTCAAAAGTAAAATTGTAACCTTTTGAATATTTGAAATTAAATTGAATCCATACATAAAATTTAAAGACTAAAAAATTGTAACATATCGACTAAATAGAAATTAGACCTAAAATTAACTTAGGGCAAAAAGGATTTTTTTTTTTTTTTTTTTAACAACATTTGGAAATTTTGAAACAAATGTTAAAATTGAGGGTACGTTGTGTAATTTAGCCAAAAATTAAAGTCATTGCTGAAACCCCCGACGCGGCATTAGAAAGCAAAGTGTAACAGAGTTAGAGGAAAGAGTAAAGCAGAGGAAGAAAATGGGAGTAGAAGGTCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGGTTCCTTTCTTGTTCACTGTTCAAGTTCTTCATTTTTTTCTTGCTTTTTCACAGGTTTATCAGTTGGAATTTTACTGACATGAAGCTTGTGAATGAGTTTTGGTTCCTGTAGCAGATTGATTACTTGTTTGTTTGGTAGCACAGTATCGGAATTTCATTTGGTTTAGAACCTGAACCTGATTTTGTTCCTGTTGATTTCTTTTTCCTGTCTGTTTGGTTGTATAGAAATTGAAATTCAATTGGATAAGAGCTGACTTAATTCTTTGTTCTTGTGGATTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTGTCTGTTTGGCTGTGTAGAAACAGAAACTCACTTGGGTAGAAACTGTGTCGGTTTTTGGGTTCCTACGGAAGCTTTTCTTTTTCTGTTTGGCTGTGTCTAAACATAAAACTCACCGGGTTAGAAACTGAGTCAATTGCTTGTTCCTCTATCTTTGTGATTTTTTATCTTCTTTGTCACCGATTGACCAAAAAATCCCTCGCTTGGTGGTCTTGAAATATTTAGAAACCGATTGACTCAAAAACTCCCCTTTTGAAATATACAGAAGACTCAGCTAGTGGAAATCAATTTTAATTGGTAAAGTATGGGTTTGAACCCAGAACCACTAGACCACCTGCTCTGATGCCAACTTAAACTATGGATTGACCTATAAGTTTAACCTGATAGGTGAAGGAAAATTTAATAATATATCATCTAACACTTTGGAAAGTGTTTCTGTTTGGTTGTATAGGAACAAAAGCTCACTGGGTTTTGAAACTGATGCAAATTTTTGTTCCTGTTGAAGAATTTTTGTCTGTTTAGTTGAGTACAAATGAGACTCACTGATTTAGAACTGGGTCAATTGTTTGTTGTTGTTGCTGCGGAAGATGTTTTGTCTGTTTGGTTGTATAGAATCTGAAACTCTATGGATTAGAGAATGAGTCGATTTTCTTGTTCTTTTGGAAAATTCTTTTATCTGTTTGTTGTGTAGTACAGAAACTCACTGTATTTAGAAACTGAGTAAATTTTGTTGTTCCTGTGGAAGATTTTTGTTTGTTTGGTTCTATTTGTCAGAAACAAAAACTCACTGAGTGTAGAAGGTGAGTCAACTTTTTTGTTCTTGTGGAAGATCTTTTCTTTTCATTTTCTTTTTTGTTATGCTGTACAAAGATACTAAGAAGCACGGATATTCTAGTTTGGCTAACATCTTGTGACTGACACTTTGATGCTCCAACGCTTATTGCGCATGTGTGTTACACTTGTTAGCACAATAAACTTGTGTCAAACACTAATGGTAAGAAACTAATAGGAGGCCAAAAATTGTTAGGCACATGTCTACCTCTTCCCCTAAGCTGATAAACTGATATAAACAGTAACTTTGGACAAAAGTAATCAATTTTGAGAGCAGAATATATTAAACTCTTTTTTGAAGCATATGAATGCTATTGTGCGGTATTTGGGGAGCTGAAGAAAAAGAGGCGATATGGAAATAGCTAGGGTTGGAGACTAGTGGCCAGCTATGATTGATCAAACAGAAACGGTAAAAGAAAGCTAAAAAAGGTCAATAGTGCTAAAGCAGAGATTTAAACACAGCACATAATATTAATATAAACATGTCTAACAGCTATTGACTTCAATCTCATTCTAGTATAAGAATGATACATATTTAAAAATATATACTTTGTTTAAACATGTATATATAATCGTGTATTCTTTCATTTTTCTCTCAATGAAAGTTGTTGTTCTTATAAAAGAAATTAGCATGTTCTTGCCGTCTTCTTGTCCTAGATTTTTAAACATAGACATGTCCGTTTGTTTGCATATCCATATCCATGTTTGTGCTTCTAAGACAAAAGCTCAACTGGTTATAAAATTTCGGTGAGATTCAGTTTGCTTGATGGAAGTAATCTCTATACAATTTGGTTTTTAAGATTTAAGAGTAGGTGGCTTGTTCACTCTGCAATCTTCCATCACCTAGCTGAGGAAAGGTTTGAAGTTAATTTGAATGTTTAAGGTCTCATCTGATAATGACTTTGTTTTTGAAAATTGGGCATGTTTTCTTTTCATTTTATCAATGAAAAGCCTTGTTTCCTTTTTAAAGAAAAGAAAATTGGGCTTGTTTTCTTATAATTTCTTTTTATTATGGATTTCAGCTTCCTTCCCGAATAATTCAAATACTCAAAACTACCCCTTTTTCAGTTTTTAAATTTTGGTTTGGATTTTGAAAACATAAAGTAGGTAACAAAAACAAAGAAGCTTACAAGTGAAAATAGTGTTGATAAGCTTAATTTTTAAAAACCAAATATACTAAAATAAATGGTTATCAAATGGGGCTAAGTGAGTAAAATTCGTGACCCAGATGTTACCATTATTATTACCTCTTAAATTTTTTTCAGCTTTAATATCAACTGAACATGTATAGTTCTTAACAATAAATTAAATACTTGGAACTGGTTAGGCTGTTTTTTGGCATAAATTACTATATTGAATTTGTTTGGTTGAGATCCTGCATTGGAAAAATCAAGGAAAATTAAGGGACTCACAATCTTTATAAGATAGATGTGCTACTCATTTCATTGTCAATTGGTTTCGAGATTAACCCCGTGTTATCTAATATGTTTTACTTGTGCTTGCATTTGAATTAGTTTCAATCAGATTGGCTTGCATTTAACTCCATTTGTGATGTTTGGTCATGATTTTCTAGATTCTCCAACTTAGCGATCATTTCCAGAAACTTGAAATAAGTTCATTTGTAATTCTTTTTCAAATGCTTTCTCATACCATGTTGTATTTTTGCTAGCCTGATAAGTCTTACAATTCCCCCCTTTAGGTTCTGCTACCCAGTCTCAACACAACTCCTCAACAGATAAGGACATTGGTTACTATACACTTTCAGGTTCCAATGTGCCAGCCCCGCCCCAAAACACAGCCGTGGGGGGCAAAGCTTCTCTCCTGCCGAAGCGTACACCTGTCTCGGACAGAGAGATAGAGGCTATCCTGGTAAGCAGAATAGTCTGTTTTTCATAGTTATGATACCTGCATTTACAAAATTTATATACATTATAAAATCCGTCACTATAGGAAGAGGGAATGAAAGGGGGTTGGGAAAAACTAAACTAGAGTCTTTAAGGGCCAATTTGGTAAATTATTTTTGTTTTTTTTTTTTTATTTATTGTTGCATGTTTCTTGTTCCCTCCTTTTCAATATTAAAACAAAAATAAAAGAAGAGAAAAGGAAAAAAGAAAAAAAAAATGGAATTACATTTGGTAACTCTTTCTTATTTCTTGCTTTTTCTCACTTGGTAACGGTTTCTCGTTTCTTGTTCTCTTACCATGTAAATTACATAGGTTAAAATTTTACATGAAAATAAGTTTATAAATTAAAAACTTTATCTTAAATTTATTTTTAGATATCCATTATGCATTTTAATGGTAAAAAATGCTAAAATAACACCTTTTTTTTTGGAAAAAAATTGAAAACATGAACATGGTTCAATAAACTTGGTTTTGTCGTTTCCAAAATTTCTACCCAACTTTGAAAACATGTTTGAAAAGTGACAAACAAGAAATAAGATCAATTTTGTTTCTAAAAATAGGAATTCAAAAACACTAGCCCTGATATGATGGACTGATGTTTATTCTGATAAGTGGATCCCAGCTTTAAATGTATAAACATACACAAAGCATTTAAGCTTTTCAAACCCCATGATTTTTCTATTTGCTTTGTTTTTGTAACAATGCAGTTGGGTGGATGCTTTTGATCTTTTCCATCTGATGTCATGGAAGGATAGCATAGCGATTGTTCAATATCTGGTTCGATTTCCTTGTTAGCCAATATCATTGATCTAAAAATTTGTTGCAAACATTTGCTTTCACCTGTAAAGATATCAGAATCATCTCGATTTCGATTCTCTTCTTGTATGGGACTGTTAAACCCCTGCCCCGGGTTGAGACCTCGAGCAGAGGTCTTCTGCTTTTTTTCTTGTCTCCTCCTCAGATTGTATCCATCAATGACTCCCTTCATGGAATGTGAAATGAAAACTGGTATGTTCTTAAAAATCTATAAGAAATCCTTGTCTTTAACCAATAGCTTGGGGCTGGAGCTCCACAAGTTGTAG

mRNA sequence

GTTCGATCTCGAAGAAACGCATACAGTTCGGGAAATGAATTTACAGAAAAAACGAAACAAGATCTCAGATTAAAGAAAACAAAGGTCATCAAATTGAGTTTCAGAAATCATATCATCCTAAGATCTTGTTCACAATCTAACCTCGAAATGTCAGAAATCGTAGCACCGACCGTTTCGTTCCCAATCGCCGTAGCGGGTGGGCTCGGGGCCTTTAGGTCCACCGACCTCGCCGGTCGCTTCTTTTATATCAACTCCTTCATCTTCACCGTCTCGGTCATCTATGGCAGCCTCGTGTTGATTCGGCAAACTTCCTTTCCCGGCCTCTCGTTGTTCCTCGCTAGACACACCTTGCTCCGATCGAGAAGGTTGTTGATTGGACGAGGAGCTAACGAGCCGGCTCAACGAGTTGGCAGTCAGGCGACTCGCCGCCGGTAGCGCGGAGAGAGTCGGCGGCGACGAGAATAGACGGCTGAGATTGCTCGACATTCTTTGTTACTCGATCGGATCTGCGAACTGCCGGCGGTTGGTGTGTGAGAATATCGTATTTATAGTCCTACGATACGACATCGTGTCGGACAACAAAACCACCACGTGTTATTGTTTCAACGGAGTTAGCCCTAAACTTTTAAAACTTATTTCGTTGCCCTTAATTTTTCTTGAACATTTCGAAATTACCCTTATTCTTGGGGGTGTAAGTTCGGGATCAAAAAGCCTGTTAATTAAATGCCTGGGATTTATTTGAAGAATTTTGAAGCCTGTTTGTCAAGGGTCGATCCCAAAAGTAAACCGACGATTGTTGCCGATGACCACTAATAAAGATGTAGTCGTAGGGATGATAAAATTCCCGATGGGTCGAGTCCCGCGGGAAATTCCCGGATTGACCAGCCAAAAATTAAAGTCATTGCTGAAACCCCCGACGCGGCATTAGAAAGCAAAGTGTAACAGAGTTAGAGGAAAGAGTAAAGCAGAGGAAGAAAATGGGAGTAGAAGGTCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGGTTCTGCTACCCAGTCTCAACACAACTCCTCAACAGATAAGGACATTGGTTACTATACACTTTCAGGTTCCAATGTGCCAGCCCCGCCCCAAAACACAGCCGTGGGGGGCAAAGCTTCTCTCCTGCCGAAGCGTACACCTGTCTCGGACAGAGAGATAGAGGCTATCCTGATATCAGAATCATCTCGATTTCGATTCTCTTCTTGTATGGGACTGTTAAACCCCTGCCCCGGGTTGAGACCTCGAGCAGAGGTCTTCTGCTTTTTTTCTTGTCTCCTCCTCAGATTGTATCCATCAATGACTCCCTTCATGGAATGTGAAATGAAAACTGGTATGTTCTTAAAAATCTATAAGAAATCCTTGTCTTTAACCAATAGCTTGGGGCTGGAGCTCCACAAGTTGTAG

Coding sequence (CDS)

ATGGGAGTAGAAGGTCATGTTTTGAAGCGAATTCCACGCATTAAATTCCCTGAAAGACACCCAAAATCCTCAGCTTCAGGTTCTGCTACCCAGTCTCAACACAACTCCTCAACAGATAAGGACATTGGTTACTATACACTTTCAGGTTCCAATGTGCCAGCCCCGCCCCAAAACACAGCCGTGGGGGGCAAAGCTTCTCTCCTGCCGAAGCGTACACCTGTCTCGGACAGAGAGATAGAGGCTATCCTGATATCAGAATCATCTCGATTTCGATTCTCTTCTTGTATGGGACTGTTAAACCCCTGCCCCGGGTTGAGACCTCGAGCAGAGGTCTTCTGCTTTTTTTCTTGTCTCCTCCTCAGATTGTATCCATCAATGACTCCCTTCATGGAATGTGAAATGAAAACTGGTATGTTCTTAAAAATCTATAAGAAATCCTTGTCTTTAACCAATAGCTTGGGGCTGGAGCTCCACAAGTTGTAG

Protein sequence

MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASLLPKRTPVSDREIEAILISESSRFRFSSCMGLLNPCPGLRPRAEVFCFFSCLLLRLYPSMTPFMECEMKTGMFLKIYKKSLSLTNSLGLELHKL
Homology
[Close]
BLAST of CaUC01G000560 vs. NCBI nr
Match: XP_038874479.1 (uncharacterized protein LOC120067123 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-35
Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MG+EGHVLKRIPRIKFPERHPKSSASGSA QSQHN STDKDIGYYTLSGSNVPAPPQN A
Sbjct: 1  MGIEGHVLKRIPRIKFPERHPKSSASGSANQSQHNPSTDKDIGYYTLSGSNVPAPPQNMA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILI 85
          VGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 VGGKASLLPKRTPVSDREIEAILL 84

[Close]
BLAST of CaUC01G000560 vs. NCBI nr
Match: XP_022158039.1 (uncharacterized protein LOC111024619 [Momordica charantia])

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-33
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MGVEGHVLKRIPRIKFPERHPKSSASGSA Q+Q+N ST KDIGYY LSGS+VPAPPQNTA
Sbjct: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSAFQAQNNPSTIKDIGYYALSGSDVPAPPQNTA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILI 85
          VGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 VGGKASLLPKRTPVSDREIEAILL 84

[Close]
BLAST of CaUC01G000560 vs. NCBI nr
Match: XP_008437590.1 (PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-31
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNT 60
          MGVEGHVLKRIPRIKFP+RHPKSS  SGSA QSQHNS  DKDIGYY LSGSNVPAPPQNT
Sbjct: 1  MGVEGHVLKRIPRIKFPDRHPKSSLPSGSALQSQHNS--DKDIGYYALSGSNVPAPPQNT 60

Query: 61 AVGGKASLLPKRTPVSDREIEAILI 85
          AVGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 AVGGKASLLPKRTPVSDREIEAILL 83

[Close]
BLAST of CaUC01G000560 vs. NCBI nr
Match: XP_004145930.2 (uncharacterized protein LOC101222729 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-30
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNT 60
          MGVEGHVLKRIPRIKFP+RHPK SS+SGSA QSQHN   DKDIGYY LSGSNVPAPPQN 
Sbjct: 1  MGVEGHVLKRIPRIKFPDRHPKSSSSSGSALQSQHN--PDKDIGYYALSGSNVPAPPQNM 60

Query: 61 AVGGKASLLPKRTPVSDREIEAILI 85
          AVGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 AVGGKASLLPKRTPVSDREIEAILL 83

[Close]
BLAST of CaUC01G000560 vs. NCBI nr
Match: XP_022995845.1 (uncharacterized protein LOC111491252 [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-28
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MGVEGH+LKRIPRIKFPERHPKSSASGS++QSQ   ST+ ++GYY LSGSNVPAP Q+TA
Sbjct: 1  MGVEGHLLKRIPRIKFPERHPKSSASGSSSQSQQRPSTE-NLGYYALSGSNVPAPLQDTA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILI 85
          VGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 VGGKASLLPKRTPVSDREIEAILL 83

[Close]
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match: A0A6J1DY89 (uncharacterized protein LOC111024619 OS=Momordica charantia OX=3673 GN=LOC111024619 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.3e-33
Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MGVEGHVLKRIPRIKFPERHPKSSASGSA Q+Q+N ST KDIGYY LSGS+VPAPPQNTA
Sbjct: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSAFQAQNNPSTIKDIGYYALSGSDVPAPPQNTA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILI 85
          VGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 VGGKASLLPKRTPVSDREIEAILL 84

[Close]
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match: A0A1S3AV04 (uncharacterized protein LOC103482959 OS=Cucumis melo OX=3656 GN=LOC103482959 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 8.0e-32
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSS-ASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNT 60
          MGVEGHVLKRIPRIKFP+RHPKSS  SGSA QSQHNS  DKDIGYY LSGSNVPAPPQNT
Sbjct: 1  MGVEGHVLKRIPRIKFPDRHPKSSLPSGSALQSQHNS--DKDIGYYALSGSNVPAPPQNT 60

Query: 61 AVGGKASLLPKRTPVSDREIEAILI 85
          AVGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 AVGGKASLLPKRTPVSDREIEAILL 83

[Close]
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match: A0A0A0KJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139480 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.2e-31
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPK-SSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNT 60
          MGVEGHVLKRIPRIKFP+RHPK SS+SGSA QSQHN   DKDIGYY LSGSNVPAPPQN 
Sbjct: 1  MGVEGHVLKRIPRIKFPDRHPKSSSSSGSALQSQHN--PDKDIGYYALSGSNVPAPPQNM 60

Query: 61 AVGGKASLLPKRTPVSDREIEAILI 85
          AVGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 AVGGKASLLPKRTPVSDREIEAILV 83

[Close]
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match: A0A6J1K519 (uncharacterized protein LOC111491252 OS=Cucurbita maxima OX=3661 GN=LOC111491252 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 6.4e-29
Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MGVEGH+LKRIPRIKFPERHPKSSASGS++QSQ   ST+ ++GYY LSGSNVPAP Q+TA
Sbjct: 1  MGVEGHLLKRIPRIKFPERHPKSSASGSSSQSQQRPSTE-NLGYYALSGSNVPAPLQDTA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILI 85
          VGGKASLLPKRTPVSDREIEAIL+
Sbjct: 61 VGGKASLLPKRTPVSDREIEAILL 83

[Close]
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match: A0A2P5DFN9 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_069390 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.5e-22
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 0 

Query: 1  MGVEGHVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTA 60
          MG EG VLKRIPRIKFPERHPK+S+SGSA+Q+Q   S  +D    +   S+VPAPPQNTA
Sbjct: 1  MGGEGQVLKRIPRIKFPERHPKTSSSGSASQTQQARS--EDTRQKSTLTSDVPAPPQNTA 60

Query: 61 VGGKASLLPKRTPVSDREIEAILIS 86
          VGGKASL P+RTPVSDREIEAIL+S
Sbjct: 61 VGGKASLQPRRTPVSDREIEAILVS 83

[Close]
BLAST of CaUC01G000560 vs. TAIR 10
Match: AT5G24165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0 

Query: 8  LKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKASL 67
          ++RIPRIKFP+RH  SS SG A  S   S   K++     + S+VPA P+NTA GGKASL
Sbjct: 1  MRRIPRIKFPQRHSISSGSGPAPGSV--SGVKKNV----TASSDVPAAPKNTADGGKASL 60

Query: 68 LPKRTPVSDREIEAILI 85
           PKRTPVSD+EIE+I++
Sbjct: 61 QPKRTPVSDKEIESIML 71

[Close]
BLAST of CaUC01G000560 vs. TAIR 10
Match: AT4G23885.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-09
Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 0 

Query: 6  HVLKRIPRIKFPERHPKSSASGSATQSQHNSSTDKDIGYYTLSGSNVPAPPQNTAVGGKA 65
          H LKRIPRIKFP+RH   SAS   +Q  + +         TL  SN+    + T  GGKA
Sbjct: 5  HGLKRIPRIKFPQRHINPSASEGKSQVANEAD--------TLFFSNLNNIQKTT--GGKA 64

Query: 66 SLLPKRTPVSDREIEAILI 85
          S  PKRTPVS+ E+EAIL+
Sbjct: 65 SSQPKRTPVSNEEMEAILL 73

The following BLAST results are available for this feature:
BLAST of CaUC01G000560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038874479.11.5e-3594.05uncharacterized protein LOC120067123 [Benincasa hispida][more]
XP_022158039.18.8e-3390.48uncharacterized protein LOC111024619 [Momordica charantia][more]
XP_008437590.11.7e-3190.59PREDICTED: uncharacterized protein LOC103482959 [Cucumis melo][more]
XP_004145930.21.4e-3088.24uncharacterized protein LOC101222729 [Cucumis sativus][more]
XP_022995845.11.3e-2883.33uncharacterized protein LOC111491252 [Cucurbita maxima][more]
BLAST of CaUC01G000560 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC01G000560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DY894.3e-3390.48uncharacterized protein LOC111024619 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A1S3AV048.0e-3290.59uncharacterized protein LOC103482959 OS=Cucumis melo OX=3656 GN=LOC103482959 PE=... [more]
A0A0A0KJG55.2e-3188.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139480 PE=4 SV=1[more]
A0A6J1K5196.4e-2983.33uncharacterized protein LOC111491252 OS=Cucurbita maxima OX=3661 GN=LOC111491252... [more]
A0A2P5DFN97.5e-2271.76Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_069390 PE... [more]
BLAST of CaUC01G000560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24165.11.5e-1457.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G23885.19.5e-0949.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..37
NoneNo IPR availablePANTHERPTHR35751FAMILY NOT NAMEDcoord: 4..85
NoneNo IPR availablePANTHERPTHR35751:SF1BNAA02G37040D PROTEINcoord: 4..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G000560.1CaUC01G000560.1mRNA