CaUC01G000440 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC01G000440
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF688 domain-containing protein
LocationCiama_Chr01: 312453 .. 314049 (-)
RNA-Seq ExpressionCaUC01G000440
SyntenyCaUC01G000440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTACTCACAATCTCTCTCACTCCCTACACTCACATCTATTTACTCATTTCTACCAACCCATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGGGCACTCTACCGTCGCCCACGACGGTGCTCGACGGCCCGGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGGCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTGAGCCCAAGTATTTCCAACTTTTTTTTTTAAAATTTATTTTATATTTATCTTATTATTTATTAATTTTTTTAACATCTTTACATAAATATGTCACTTAAATGCTATTATATTTGTTTTAACTCCACTAACCAAATTTATTTATCCACTTACACATAACTCAATTGGTATCAATTAAACATCTCTTATCCTATTTGTTTGTTGAACTAAATAATAATAATATATAAAATGAAATTTATTTACCAAGTTATTAGATATCTCTGCATATGCCTAAATATATTAATAAAGTAATAATTCAAATGACACAACTTTCTATAAAATGACTTAATTGAAAATCTCTAATACTTTAGAGGTAGAATTCATATTTTTAAAAAAGGTTAAGGCTAAATTTAAAATTTAGTCAAAGGATTTGGCTCTAACTAATATATTTAACATTTTTCATTTCTTTTGAGTTCATCAACCAATAGGGTGGTGTGCGTATTCGAGTTGCAAAATGAAAGCATGAGAACTACCCAAGTTAAGTGTCGAGCAAGCAAAATACTAGATAATATGTGCTTGTATTTATATGGAGAGTTTAATTATATAATTGGCTAATTAAAGAAATTATTATGTGGTTAAAATGAGACTTCAACTAGTTTAAGTTAAAAATGATAAATAATAGCTGAGAAATTATGTTTTACGACCTACCACTAAACTTTTGGTAGTTAGAAAAGAGAATAAGAGAGAACAAACACATTTTCTTTAAAAGCAAACATGTTCACAAACTTTTATTTCAGTTGAGTTATTTATGCTCATGTTCACAAATGTGCGTTAAAAACTTACTACTGGGAGAGTAGAATAATTTGAAATTATTTTCTAAAACATAATCATATTGTTAGGCATAGTTATTATAAAAGCTCTCTTTTATTATTTTGTTAGTACTATTATTAATAACCCTAATTAACTAATCATATATCTAGCACAAACATACTAAAGGTAAGAATTTGATCATGACTCAATTTCATTGCAGGTGAATATCTATGAGAGCTTTAAACAGGTAGTTCCGTGGAGACTGAAGAACAAAAGATAATCAAC

mRNA sequence

TACTACTCACAATCTCTCTCACTCCCTACACTCACATCTATTTACTCATTTCTACCAACCCATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGGGCACTCTACCGTCGCCCACGACGGTGCTCGACGGCCCGGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGGCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTGAATATCTATGAGAGCTTTAAACAGGTAGTTCCGTGGAGACTGAAGAACAAAAGATAATCAAC

Coding sequence (CDS)

ATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGGGCACTCTACCGTCGCCCACGACGGTGCTCGACGGCCCGGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGGCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTGAATATCTATGAGAGCTTTAAACAGGTAGTTCCGTGGAGACTGAAGAACAAAAGATAA

Protein sequence

MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGNDPSGTGVDGGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNKR
Homology
BLAST of CaUC01G000440 vs. NCBI nr
Match: XP_038875428.1 (uncharacterized protein LOC120067888 [Benincasa hispida])

HSP 1 Score: 247.7 bits (631), Expect = 7.5e-62
Identity = 129/156 (82.69%), Postives = 133/156 (85.26%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           MCSEPPHT   TS PTLPLS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPR S AS++L
Sbjct: 1   MCSEPPHTPHRTSIPTLPLSWLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRSSAASKVL 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVG--GNG 120
           W VPAL ELPPPP+L NEAKQ TLPSPTT+LDGPERAGD SKRWGSFRMFKDFVG  GNG
Sbjct: 61  WPVPALGELPPPPQLFNEAKQSTLPSPTTLLDGPERAGDRSKRWGSFRMFKDFVGGNGNG 120

Query: 121 NDPSGTGVDGGGGSGRFRRKRTSSLSVSSYARSHFL 155
           ND    G D GGGSG FRRKRTSS SVSSY RSHFL
Sbjct: 121 NDSLAAGADCGGGSGWFRRKRTSSSSVSSYTRSHFL 156

BLAST of CaUC01G000440 vs. NCBI nr
Match: XP_022958693.1 (uncharacterized protein LOC111459844 [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 128/173 (73.99%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGND 120
           W  P L +LPPPPRLLNEA Q TL SPTTVLDGPERA  GSKRWGSFRM K+ VGG GND
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERA-YGSKRWGSFRMCKELVGG-GND 120

Query: 121 PSGTGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNK 173
              T VD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V PWR + +
Sbjct: 121 SLATVVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPWRRRRR 171

BLAST of CaUC01G000440 vs. NCBI nr
Match: XP_022995989.1 (uncharacterized protein At4g00950-like [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-56
Identity = 127/173 (73.41%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           M SEPPHT+E +STP+L LS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ 
Sbjct: 1   MWSEPPHTLERSSTPSLVLSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGND 120
           W  P L +LPPPPRLLNEA Q TL SPTTVLDGPERA  GSKRWGSFRM K+ V G GND
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERA-YGSKRWGSFRMCKELVSG-GND 120

Query: 121 PSGTGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNK 173
              TGVD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V   R + +
Sbjct: 121 SLATGVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFQGRRRQR 171

BLAST of CaUC01G000440 vs. NCBI nr
Match: KAG6605789.1 (hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035754.1 hypothetical protein SDJN02_02552, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-56
Identity = 127/173 (73.41%), Postives = 136/173 (78.61%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGND 120
           W  P L +LPPPPRLLNEA Q TL SPTTVLDGPERA  GSKRWGSFRM K+ VGG GND
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERA-YGSKRWGSFRMCKELVGG-GND 120

Query: 121 PSGTGVDG-GGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNK 173
              T VDG GGGSGRF +K T SLSVSSY RSHFLV IYE FK+V P R + +
Sbjct: 121 SLATVVDGCGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPCRRRRR 171

BLAST of CaUC01G000440 vs. NCBI nr
Match: KAA0042546.1 (uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05950.1 uncharacterized protein E5676_scaffold376G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-47
Identity = 122/180 (67.78%), Postives = 135/180 (75.00%), Query Frame = 0

Query: 1   MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASE 60
           MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LLWRVPALR-ELPPPPRLL-NEAKQ-GTLPSPTTVLDGPERAG-DGSKRWGSFRMFKDFV 120
           +LW+VP +  +LPPPPRLL NE KQ   LPSPTTVLDG ER G  GSKRWGSFRM +   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGNGNDPSGTGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVPWRLKNK 173
                       + GGGSGRFRR R+ SSLS+SSYA  SHFLVNIYESFKQV+PWR + +
Sbjct: 121 ------------NNGGGSGRFRRGRSASSLSLSSYATSSHFLVNIYESFKQVLPWRRRTR 165

BLAST of CaUC01G000440 vs. ExPASy TrEMBL
Match: A0A6J1H3S6 (uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC111459844 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.4e-58
Identity = 128/173 (73.99%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           M SEPPHT E +STP+L  S LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ 
Sbjct: 1   MWSEPPHTPERSSTPSLVFSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGND 120
           W  P L +LPPPPRLLNEA Q TL SPTTVLDGPERA  GSKRWGSFRM K+ VGG GND
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERA-YGSKRWGSFRMCKELVGG-GND 120

Query: 121 PSGTGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNK 173
              T VD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V PWR + +
Sbjct: 121 SLATVVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFPWRRRRR 171

BLAST of CaUC01G000440 vs. ExPASy TrEMBL
Match: A0A6J1K7H0 (uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC111491336 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 127/173 (73.41%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELL 60
           M SEPPHT+E +STP+L LS LPPEPPWMPTPPRLTLASVPFLWEEAPGKPRP   SE+ 
Sbjct: 1   MWSEPPHTLERSSTPSLVLSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIP 60

Query: 61  WRVPALRELPPPPRLLNEAKQGTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGND 120
           W  P L +LPPPPRLLNEA Q TL SPTTVLDGPERA  GSKRWGSFRM K+ V G GND
Sbjct: 61  WLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERA-YGSKRWGSFRMCKELVSG-GND 120

Query: 121 PSGTGVD-GGGGSGRFRRKRTSSLSVSSYARSHFLVNIYESFKQVVPWRLKNK 173
              TGVD GGGGSGRF +K T SLSVSSY RSHFLV IYE FK+V   R + +
Sbjct: 121 SLATGVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVKIYEKFKRVFQGRRRQR 171

BLAST of CaUC01G000440 vs. ExPASy TrEMBL
Match: A0A5A7TKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00430 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.1e-48
Identity = 122/180 (67.78%), Postives = 135/180 (75.00%), Query Frame = 0

Query: 1   MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASE 60
           MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LLWRVPALR-ELPPPPRLL-NEAKQ-GTLPSPTTVLDGPERAG-DGSKRWGSFRMFKDFV 120
           +LW+VP +  +LPPPPRLL NE KQ   LPSPTTVLDG ER G  GSKRWGSFRM +   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGNGNDPSGTGVDGGGGSGRFRRKRT-SSLSVSSYA-RSHFLVNIYESFKQVVPWRLKNK 173
                       + GGGSGRFRR R+ SSLS+SSYA  SHFLVNIYESFKQV+PWR + +
Sbjct: 121 ------------NNGGGSGRFRRGRSASSLSLSSYATSSHFLVNIYESFKQVLPWRRRTR 165

BLAST of CaUC01G000440 vs. ExPASy TrEMBL
Match: A0A1S3AU39 (uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-47
Identity = 121/180 (67.22%), Postives = 134/180 (74.44%), Query Frame = 0

Query: 1   MCSEPPHTV-ETTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASE 60
           MCSEPPHT    TSTPTLPLS LP  + PWMPTPPRLTL SVPFLWEEAPGKPRPS AS+
Sbjct: 1   MCSEPPHTTHHPTSTPTLPLSWLPVLDSPWMPTPPRLTLVSVPFLWEEAPGKPRPSTASK 60

Query: 61  LLWRVPALR-ELPPPPRLL-NEAKQ-GTLPSPTTVLDGPERAG-DGSKRWGSFRMFKDFV 120
           +LW+VP +  +LPPPPRLL NE KQ   LPSPTTVLDG ER G  GSKRWGSFRM +   
Sbjct: 61  VLWQVPVVAGKLPPPPRLLKNEVKQSNNLPSPTTVLDGDERGGMVGSKRWGSFRMCE--- 120

Query: 121 GGNGNDPSGTGVDGGGGSGRFRRKRT-SSLSVSSYARSH-FLVNIYESFKQVVPWRLKNK 173
                       + GGGSGRFRR R+ SSLS+SSYA S  FLVNIYESFKQV+PWR + +
Sbjct: 121 ------------NNGGGSGRFRRGRSASSLSLSSYATSSPFLVNIYESFKQVLPWRRRTR 165

BLAST of CaUC01G000440 vs. ExPASy TrEMBL
Match: A0A0A0KJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139380 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42
Identity = 115/188 (61.17%), Postives = 129/188 (68.62%), Query Frame = 0

Query: 1   MCSEPPHTVE--TTSTPTLPLSSLPP-EPPWMPTPPRLTLASVPFLWEEAPGKP-RPSPA 60
           MCSEPPH+     TSTPTLPLS LP  EPPWMPTPPRLTL SVPFLWEEAPGKP RPS A
Sbjct: 1   MCSEPPHSTHHPPTSTPTLPLSWLPVLEPPWMPTPPRLTLVSVPFLWEEAPGKPRRPSAA 60

Query: 61  SELLWRVP--ALRELPPPPRLL-NEA--KQGTLPSPTTVLDGPERAGD---GSKRWGSFR 120
           S++LW+VP  A  +LPPPPRLL NE   +   L SPT V++G ++ G    GSKRWGSFR
Sbjct: 61  SKVLWQVPVVAAGKLPPPPRLLKNEVVKQSNNLASPTRVVEGDDQRGGVVVGSKRWGSFR 120

Query: 121 MFKDFVGGNGNDPSGTGVDGGGGSGRFRRKR---TSSLSVSSYARSHFLVNIYESFKQVV 174
           M                     GSGRFRR R   +SSLS+SSYA SHFLVNIYESFKQ+V
Sbjct: 121 MC-----------------DSNGSGRFRRGRSASSSSLSLSSYATSHFLVNIYESFKQIV 171

BLAST of CaUC01G000440 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 7.3e-15
Identity = 72/191 (37.70%), Postives = 90/191 (47.12%), Query Frame = 0

Query: 13  STPTLPLSSLP----PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRE 72
           +TP LPL S+P     + P + TPP     SVPFLWEEAPGKPR S  ++ L      RE
Sbjct: 13  ATPKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNERE 72

Query: 73  ---------LPPPPRLLNEAKQGTLPSPTTVLDGP--------------ERAGDGSKRWG 132
                    L  PPRL   A     PSPTTVLDGP              ERA +G   + 
Sbjct: 73  GGGGGVVRCLELPPRLFFPADDE--PSPTTVLDGPYDVPRRSLSVIRRSERASEGRFEF- 132

Query: 133 SFRMFKDFVGGNGNDPSGTGVDGGGGS----GRFRRKRTSSLSVSSYARSHFLVNIYESF 173
                           +    DGGGG+     R RRK   SL   S+++S FL  +Y+ F
Sbjct: 133 ------------SRSTNSRCCDGGGGTTVKISRVRRK--GSLLNLSHSKSQFLARVYQGF 186

BLAST of CaUC01G000440 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13
Identity = 74/217 (34.10%), Postives = 92/217 (42.40%), Query Frame = 0

Query: 17  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELP 76
           LPL S P         P + TPP     SVPFLWEEAPGKPR       L +   +R L 
Sbjct: 19  LPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVRSLE 78

Query: 77  PPPRLLNEAKQGTL--PSPTTVLDGP-------------------------------ERA 136
            PPRL+   +  T+  PSPTTVLDGP                               ER 
Sbjct: 79  LPPRLVLPGESTTVNEPSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERL 138

Query: 137 GDGSKRWGSFRMFKDFVGG--NGNDPSGTGVD------GGGGSGRFRR----------KR 173
             GS RWGSF   K+   G  + +     G D      GGGG G F            K+
Sbjct: 139 VGGSSRWGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKK 198

BLAST of CaUC01G000440 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 68/202 (33.66%), Postives = 83/202 (41.09%), Query Frame = 0

Query: 17  LPLSSLP------PEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELP 76
           LPL S P         P + TPP     SVPFLWEEAPGKPR       L +   +R L 
Sbjct: 19  LPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKGVVRSLE 78

Query: 77  PPPRLLNEAKQGTL--PSPTTVLDGP-------------------------------ERA 136
            PPRL+   +  T+  PSPTTVLDGP                               ER 
Sbjct: 79  LPPRLVLPGESTTVNEPSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPEKEERL 138

Query: 137 GDGSKRWGSFRMFKDFVGG--NGNDPSGTGVD------GGGGSGRFRR----------KR 162
             GS RWGSF   K+   G  + +     G D      GGGG G F            K+
Sbjct: 139 VGGSSRWGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKLYRIIKK 198

BLAST of CaUC01G000440 vs. TAIR 10
Match: AT5G51680.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 41.6 bits (96), Expect = 7.6e-04
Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 0

Query: 21  SLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAK 80
           S PP PP +P P +L + SVPF WEE PGKP P+ +++         +LP PP  L  A 
Sbjct: 47  SPPPLPPPIPVPVKL-VTSVPFRWEETPGKPLPASSND-------PPQLPHPP--LETAT 106

Query: 81  QGTLPSPTTV 91
              LP P  V
Sbjct: 107 PTPLPPPVPV 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875428.17.5e-6282.69uncharacterized protein LOC120067888 [Benincasa hispida][more]
XP_022958693.11.1e-5773.99uncharacterized protein LOC111459844 [Cucurbita moschata][more]
XP_022995989.12.1e-5673.41uncharacterized protein At4g00950-like [Cucurbita maxima][more]
KAG6605789.13.6e-5673.41hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0042546.11.0e-4767.78uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H3S65.4e-5873.99uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC1114598... [more]
A0A6J1K7H01.0e-5673.41uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC1114913... [more]
A0A5A7TKS55.1e-4867.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AU395.6e-4767.22uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=... [more]
A0A0A0KJF71.9e-4261.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139380 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G27810.17.3e-1537.70unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G53030.13.1e-1334.10unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G53030.25.4e-1033.66unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G51680.17.6e-0442.86hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..144
NoneNo IPR availablePANTHERPTHR34371:SF2DUF688 FAMILY PROTEINcoord: 136..172
coord: 1..112
NoneNo IPR availablePANTHERPTHR34371OS01G0551000 PROTEINcoord: 136..172
coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC01G000440.1CaUC01G000440.1mRNA