CSPI07G23140 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G23140
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 19505309 .. 19505653 (-)
RNA-Seq ExpressionCSPI07G23140
SyntenyCSPI07G23140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTGTAATTGTTATCAAATTTGTAAACTTTCAGTTCTTCATTTTTTACAAACAAAACTTGAAGGTTGTGTTTAGTTTCTTCATGCTTCGTATAAATTTGGTTAGTGTACTCTTACATTTTGAATAAGATAAGCTTCAACTTTCCTTTTCGTTTTTAAAATTGAAGAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

mRNA sequence

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

Coding sequence (CDS)

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

Protein sequence

MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS*
Homology
[Close]
BLAST of CSPI07G23140 vs. ExPASy TrEMBL
Match: A0A0A0K9Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452190 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.6e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

[Close]
BLAST of CSPI07G23140 vs. NCBI nr
Match: KGN45564.1 (hypothetical protein Csa_016652 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

The following BLAST results are available for this feature:
BLAST of CSPI07G23140 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G23140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Q38.6e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452190 PE=4 SV=1[more]
BLAST of CSPI07G23140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45564.11.8e-26100.00hypothetical protein Csa_016652 [Cucumis sativus][more]
BLAST of CSPI07G23140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G23140.1CSPI07G23140.1mRNA