CSPI07G23020 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G23020
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 19424759 .. 19425010 (+)
RNA-Seq ExpressionCSPI07G23020
SyntenyCSPI07G23020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGGCGTCGCTAA

mRNA sequence

ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGGCGTCGCTAA

Coding sequence (CDS)

ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGGCGTCGCTAA

Protein sequence

MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKWAKAVVAYARTVSDRFGSRRR*
Homology
BLAST of CSPI07G23020 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of CSPI07G23020 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-36
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of CSPI07G23020 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKW 63
           +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+GIK+W
Sbjct: 25  RKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARTVSDRFGSRR 83
           AKAVVAYAR VSDRFGS R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

BLAST of CSPI07G23020 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKK+LSL + E AK    H+ +  RR  +  CFS+ E+PMERGK+LKEM+S KLK  I
Sbjct: 1  MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRR 83
          K+WAKAVVAYAR VS RFG  R
Sbjct: 61 KRWAKAVVAYARQVSGRFGGTR 78

BLAST of CSPI07G23020 vs. ExPASy TrEMBL
Match: A0A540KWP0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKW 63
           +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+GIK+W
Sbjct: 25  RKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARTVSDRFGSRR 83
           AKAVVAYAR VSDRFGS R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

BLAST of CSPI07G23020 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 7.6e-36
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of CSPI07G23020 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of CSPI07G23020 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFDLCFS P++ MERGKSLKEM+SEKLK+GI
Sbjct: 1  MSVKKSLSLTKAEEAKRSARHDAARKRRRSFDLCFSSPKLQMERGKSLKEMDSEKLKSGI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRRR 84
          +KWAK+VVAYAR VSDRFGS RR
Sbjct: 61 RKWAKSVVAYARQVSDRFGSWRR 83

BLAST of CSPI07G23020 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 5.9e-28
Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60
          MSVKKS SLTKAEEAKR  RH+AARKRRRSFDLCFS PE+PME GKSLKEM+SEKLK  I
Sbjct: 1  MSVKKSFSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPMEYGKSLKEMDSEKLKDAI 60

Query: 61 KKWAKAVVAYARTVSDRFGSRR 83
          +KWAKAVVAYARTVS+RFGSRR
Sbjct: 61 RKWAKAVVAYARTVSNRFGSRR 82

BLAST of CSPI07G23020 vs. NCBI nr
Match: XP_028964144.1 (uncharacterized protein LOC114827006 [Malus domestica] >RXH88728.1 hypothetical protein DVH24_000327 [Malus domestica] >TQD78432.1 hypothetical protein C1H46_036021 [Malus baccata])

HSP 1 Score: 87.4 bits (215), Expect = 6.3e-14
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKW 63
           +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+GIK+W
Sbjct: 25  RKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARTVSDRFGSRR 83
           AKAVVAYAR VSDRFGS R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KB033.7e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1[more]
A0A5A7UXU06.3e-3698.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A498IZM53.0e-1462.03Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1[more]
A0A2P5FE883.0e-1460.98Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV... [more]
A0A540KWP03.0e-1462.03Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN45542.17.6e-36100.00hypothetical protein Csa_016865 [Cucumis sativus][more]
KAA0059447.11.3e-3598.80hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK038... [more]
KAG6593505.13.4e-2884.34hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575488.15.9e-2885.37hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_028964144.16.3e-1462.03uncharacterized protein LOC114827006 [Malus domestica] >RXH88728.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR36484OS01G0558700 PROTEINcoord: 1..83
NoneNo IPR availablePANTHERPTHR36484:SF2OS01G0558700 PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G23020.1CSPI07G23020.1mRNA