CSPI07G22780 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G22780
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
LocationChr7: 19265856 .. 19268386 (+)
RNA-Seq ExpressionCSPI07G22780
SyntenyCSPI07G22780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAGCTCTGTTTCCGCGCGAGAAGCCCTTCCTCTGTTAGGGTTTTACTTAGTAGAGGAGAAACATTTTGAAAAAAATAAACGGGTAGATTATAGTTTTCATAAATTAGTACAAAGAATTTCCGGCTTCAATGGCGGGAGAAAGGCATTACAATCCTGATTTCAACGCTTGCAATGGCGAAAATTTGGCCCAAATGTACGATCAGCAGAAACAATTTGATATGGGGAATGAATTGGAACAAGCAAATGTAGATAGTACAAGAAGTGAAATTAAGAATTCAACGACTCAGTATGATTCTTCTTCCAGTGGGTTAGTTTTTATGGTTCCTTTTTGTCATTCTGGTAAATAAATACACTCATAATTTATGGGGAATTAGTTGTTGAATCAAACCTTTTTGGAGCTTAACACATTTTTTTTTCTTATTTGTTAGCAAACTTTTCGTTGGAGGTGTCGCTTGGGAGACCACTGAAGGTAAATGTAAATTTAGTAAGTTATTGATTGCTGGGGATTTGGGGATACTCTAGAAAAAAAACAGGTCCTTTTTGTTCGTTAACGATTAATCTTTATGGTTTTTTGTATTTAAGTCATATGACGAAAGATAGAATCTTTGATACATTATTTTTCTTATAAGATGAACAGTTTCTTTAAGCTAGAACTACCAAAGAAAAAAAAAAGGAAAAGGAAAACATCTAATGTTAGATAAATCAACTAAAATATGTTTCTATAGTTGTACAAGTCTTCTTGTTATTAGTCTAGCTTTTATTCATTGTCTTGTTATCAGTTCCCAGTTCCCACTATAGAGCCCTTTTTATTTTGTCTTTTAATTCCCTCATTAACTTCATGTGCATCTTGATTATGTTGCTTGGGGCCTAAATAGATGTCATTCCCTTGTTGCATAAATTATTGGATTTATGCTCATTTGATAATGCTGCTAATTCCAACTAGTTAACGTTAGCATAGCTCAATGATAATTGGTGTTCAAATCCCATGCCCCATGTTTGTTGTAATCATAAGACTTGTTGACATGAAATAACTCTTCTTGGGTTGGATGTCCCCCAATCCCATCTCCCAGGCATCCTTAGGAAAAGAAAAAATAATCTTTCCTTTGTCACATTGCCATTGTGCTAATATGTTATTAATTCCAAGTTATTCTTTCTGAATTCTAACTGTCATCATCCTGACATACATGTCTTAGAAACGATTTATCTATTATTATTATTTGGTATTCAGATACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGGAGGCCACGCGGGTTCGGTTTTGTAACATTCTGCGATCCTGCCATTGCTGACATGGTTCTGAAGATAGATCATATTATAGATGGCAGAGCGGTAGCATAAGTTTCTTTTTTGTAATTCTAAGCTTGTTATCTATACGATGGGTAATGGTCAATGAAATATTTTTATATCATTATCAGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGACAAAATGGTATCAAGAACAAAAAAGATTTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGGTAGTATTATTGTATAAAGTCAATATATATTTTCTTTTATGATTGATTCTTGATTTCAGAATTAATATTAATTGAAAGATGCTGTGTTTGGATGTCTCGTAAACATTGCAGAGGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGAATTATAGAACACCAAATCATGATAGATTATAAAACGAAGCGATCAAGAGGATTTGGATTTATCACTTTTGAGAATGAAGATTCAGTTGAAAATATCTTTTCTGGTGATAGAATACATGAGCTTGGAGGCAAGCAGGTAAGTTCTATATATATTTTGCTTACATGAAAAAAAACTTTATGAGATTGTTTACAGAACTTCTGTATGTCAACACGACCAAATGCAGGTGGAAATTAAGAAGGCTGTACCAAAAAGAGTTGCTTATGATTTCAATAGTAACAGTGGGCAGACTTCAGGATATGACATGTATAGATGTGGAGGTTTATATGATGATATAATTGGCACAGATTTTGGTCCTTATGATTTATATGCACCGTATGGTGGCTTTGGTGTAAACTACGCCAGTTTTTACGGTGCATACAACTATGGTTTTGGTTATGGTGCTTCCATGTATATGAACGGTAGATATGGGATGAACGGCTACGGTGCCCCCTCTGTTGGATATGGAATTAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATTTCATCCATATTGGTATTGAGCAGACTTTTCCTAGATGGTTTCTTTGGTGAAGAAAGCGATGATTGATTTTGAACAGGCACGAGTGTTATCCATCTTAGTTGCTGTGCAGTTCGAGATTTTTTAAGTGTAATATAAATATTGTAGACAATTTTTCATTCTCTTTTTATTTTTGTTGTTTTTCTTTCTTTGAGACATGAAATGATTTGATTGATAAAATAGAATGGTGAACATATCTTTGGTT

mRNA sequence

GATAGCTCTGTTTCCGCGCGAGAAGCCCTTCCTCTGTTAGGGTTTTACTTAGTAGAGGAGAAACATTTTGAAAAAAATAAACGGGTAGATTATAGTTTTCATAAATTAGTACAAAGAATTTCCGGCTTCAATGGCGGGAGAAAGGCATTACAATCCTGATTTCAACGCTTGCAATGGCGAAAATTTGGCCCAAATGTACGATCAGCAGAAACAATTTGATATGGGGAATGAATTGGAACAAGCAAATGTAGATAGTACAAGAAGTGAAATTAAGAATTCAACGACTCAGTATGATTCTTCTTCCAGTGGCAAACTTTTCGTTGGAGGTGTCGCTTGGGAGACCACTGAAGATACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGGAGGCCACGCGGGTTCGGTTTTGTAACATTCTGCGATCCTGCCATTGCTGACATGGTTCTGAAGATAGATCATATTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGACAAAATGGTATCAAGAACAAAAAAGATTTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGAGGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGAATTATAGAACACCAAATCATGATAGATTATAAAACGAAGCGATCAAGAGGATTTGGATTTATCACTTTTGAGAATGAAGATTCAGTTGAAAATATCTTTTCTGGTGATAGAATACATGAGCTTGGAGGCAAGCAGGTGGAAATTAAGAAGGCTGTACCAAAAAGAGTTGCTTATGATTTCAATAGTAACAGTGGGCAGACTTCAGGATATGACATGTATAGATGTGGAGGTTTATATGATGATATAATTGGCACAGATTTTGGTCCTTATGATTTATATGCACCGTATGGTGGCTTTGGTGTAAACTACGCCAGTTTTTACGGTGCATACAACTATGGTTTTGGTTATGGTGCTTCCATGTATATGAACGGTAGATATGGGATGAACGGCTACGGTGCCCCCTCTGTTGGATATGGAATTAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATTTCATCCATATTGGTATTGAGCAGACTTTTCCTAGATGGTTTCTTTGGTGAAGAAAGCGATGATTGATTTTGAACAGGCACGAGTGTTATCCATCTTAGTTGCTGTGCAGTTCGAGATTTTTTAAGTGTAATATAAATATTGTAGACAATTTTTCATTCTCTTTTTATTTTTGTTGTTTTTCTTTCTTTGAGACATGAAATGATTTGATTGATAAAATAGAATGGTGAACATATCTTTGGTT

Coding sequence (CDS)

ATGGCGGGAGAAAGGCATTACAATCCTGATTTCAACGCTTGCAATGGCGAAAATTTGGCCCAAATGTACGATCAGCAGAAACAATTTGATATGGGGAATGAATTGGAACAAGCAAATGTAGATAGTACAAGAAGTGAAATTAAGAATTCAACGACTCAGTATGATTCTTCTTCCAGTGGCAAACTTTTCGTTGGAGGTGTCGCTTGGGAGACCACTGAAGATACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGGAGGCCACGCGGGTTCGGTTTTGTAACATTCTGCGATCCTGCCATTGCTGACATGGTTCTGAAGATAGATCATATTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGACAAAATGGTATCAAGAACAAAAAAGATTTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGAGGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGAATTATAGAACACCAAATCATGATAGATTATAAAACGAAGCGATCAAGAGGATTTGGATTTATCACTTTTGAGAATGAAGATTCAGTTGAAAATATCTTTTCTGGTGATAGAATACATGAGCTTGGAGGCAAGCAGGTGGAAATTAAGAAGGCTGTACCAAAAAGAGTTGCTTATGATTTCAATAGTAACAGTGGGCAGACTTCAGGATATGACATGTATAGATGTGGAGGTTTATATGATGATATAATTGGCACAGATTTTGGTCCTTATGATTTATATGCACCGTATGGTGGCTTTGGTGTAAACTACGCCAGTTTTTACGGTGCATACAACTATGGTTTTGGTTATGGTGCTTCCATGTATATGAACGGTAGATATGGGATGAACGGCTACGGTGCCCCCTCTGTTGGATATGGAATTAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATTTCATCCATATTGGTATTGA

Protein sequence

MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQTSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY*
Homology
[Close]
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.6e-47
Identity = 126/329 (38.30%), Postives = 172/329 (52.28%), Query Frame = 0 

Query: 57  SSSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADM 116
           S  GKLFVGG++WET ED   ++F+ YGE++ +++M DK TGRPRGFGFV F DP++ D 
Sbjct: 3   SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62

Query: 117 VLKIDHIIDGRAVEVKRTVPRADM---------------NDKMVSRTKKIFVGGIPPGLT 176
           VL+  H ID R V+VKR + R +                     ++TKKIFVGG+PP LT
Sbjct: 63  VLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLT 122

Query: 177 EEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVE 236
           +EEF+ YF  +G + +  IM D  T R RGFGF++F++ED+V+++      H+L GKQVE
Sbjct: 123 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH-KTFHDLSGKQVE 182

Query: 237 IKKAVPKRVAYDFNSNS---GQTSGYDMYRCGG---LYDDII------------------ 296
           +K+A+PK         S   G + GY  Y  GG    YD  +                  
Sbjct: 183 VKRALPKDANPGGGGRSMGGGGSGGYQGY--GGNESSYDGRMDSNRFLQHQSVGNGLPSY 242

Query: 297 -----------GTDFGPYDLYAPY----GGFGVNYASFYGAYNY-GFGYGASMYMNGRYG 330
                      G++   Y  Y  Y    GG+G    + YGA N  G GYG+S    G   
Sbjct: 243 GSSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSS---TGVAP 302

[Close]
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-42
Identity = 93/250 (37.20%), Postives = 146/250 (58.40%), Query Frame = 0 

Query: 12  NACNGENLA-QMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSGKLFVGGVAWE 71
           NA +GEN     Y++ +    G+   ++N D+         T   +   GK+F+GG+ WE
Sbjct: 120 NAEDGENSKNDNYNENQSALTGSGAMESNEDNAEE------TSPFNREDGKMFIGGLNWE 179

Query: 72  TTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVE 131
           TT+D+  DYF ++GE+ D  +M D  TGR RGFGF+TF +P   + V+  +H +DG+ ++
Sbjct: 180 TTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIID 239

Query: 132 VKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSR 191
            KR +PR +       +T K+FVGG+P   TEEEF+++F+ FGR+++  +M+D  T R R
Sbjct: 240 PKRAIPREEQ-----EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPR 299

Query: 192 GFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPK--------RVAYDFNSNSGQTS 251
           GFGF+T+ENE +VE   S   I  + GK VE+K+A PK        R  + ++ N+    
Sbjct: 300 GFGFVTYENESAVEATMSQPYI-TIHGKPVEVKRATPKASLRDSHDRHQHGYHGNANPYY 357

Query: 252 GYDMYRCGGL 253
             +M   GG+
Sbjct: 360 AQNMNMYGGM 357

[Close]
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match: Q99383 (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-42
Identity = 90/231 (38.96%), Postives = 140/231 (60.61%), Query Frame = 0 

Query: 21  QMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSGKLFVGGVAWETTEDTFSDYF 80
           Q+     QF   +         T+++ + S     S  S K+F+GG+ W+TTED   +YF
Sbjct: 121 QLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADL-SKESCKMFIGGLNWDTTEDNLREYF 180

Query: 81  SKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRADM 140
            KYG + D  IM D  TGR RGFGF++F  P+  D V+K  HI+DG+ ++ KR +PR D 
Sbjct: 181 GKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPR-DE 240

Query: 141 NDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENE 200
            DK    T KIFVGGI P +  +EF+++FS +G II+ Q+M+D  T +SRGFGF+T+++ 
Sbjct: 241 QDK----TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSA 300

Query: 201 DSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQTSGYDMYRCGG 252
           D+V+ +   ++  +   +++EIK+A P+ +    ++N G   G +M R GG
Sbjct: 301 DAVDRVCQ-NKFIDFKDRKIEIKRAEPRHMQQKSSNNGGNNGGNNMNRRGG 344

[Close]
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 105/257 (40.86%), Postives = 139/257 (54.09%), Query Frame = 0 

Query: 60  GKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVL- 119
           GK+F+GG++W+T+ D+  DYFSK+GEI + ++M D  T R RGFGFVTF DPA  D VL 
Sbjct: 21  GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 80

Query: 120 KIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEH 179
           +  H +D + ++ K   PR     KMV+RTKKIFVGG+      E+ K YF  FG++ + 
Sbjct: 81  QPHHELDSKTIDPKVAFPRR-AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 140

Query: 180 QIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNS 239
            +M D  T R RGFGF+TFENED VE +      HE+  K VE KKA PK V +   +  
Sbjct: 141 MLMFDKTTNRHRGFGFVTFENEDVVEKVCE-IHFHEINNKMVECKKAQPKEVMFPPGTRG 200

Query: 240 GQTSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG-VNYASFYGAYNYGF-GYGASMYM 299
                    R  GL          PY + A   G G + Y +F   Y  G+ G+  S   
Sbjct: 201 ---------RARGL----------PYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPS--- 250

Query: 300 NGRYGMNGYGAPSVGYG 314
              YG    G P+  YG
Sbjct: 261 ---YGYQFPGFPAAAYG 250

[Close]
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 105/257 (40.86%), Postives = 139/257 (54.09%), Query Frame = 0 

Query: 60  GKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVL- 119
           GK+F+GG++W+T+ D+  DYFSK+GEI + ++M D  T R RGFGFVTF DPA  D VL 
Sbjct: 21  GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 80

Query: 120 KIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEH 179
           +  H +D + ++ K   PR     KMV+RTKKIFVGG+      E+ K YF  FG++ + 
Sbjct: 81  QPHHELDSKTIDPKVAFPRR-AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 140

Query: 180 QIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNS 239
            +M D  T R RGFGF+TFENED VE +      HE+  K VE KKA PK V +   +  
Sbjct: 141 MLMFDKTTNRHRGFGFVTFENEDVVEKVCE-IHFHEINNKMVECKKAQPKEVMFPPGTRG 200

Query: 240 GQTSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG-VNYASFYGAYNYGF-GYGASMYM 299
                    R  GL          PY + A   G G + Y +F   Y  G+ G+  S   
Sbjct: 201 ---------RARGL----------PYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPS--- 250

Query: 300 NGRYGMNGYGAPSVGYG 314
              YG    G P+  YG
Sbjct: 261 ---YGYQFPGFPAAAYG 250

[Close]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match: A0A0A0K9M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 4.1e-195
Identity = 335/337 (99.41%), Postives = 335/337 (99.41%), Query Frame = 0 

Query: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60
           MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120
           KLFVGGVAWETTEDTF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180
           DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240
           MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 300
           TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY
Sbjct: 241 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 300

Query: 301 GMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           GMNGYG PSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 301 GMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match: A0A5A7UU27 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001500 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.2e-183
Identity = 322/341 (94.43%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFGYGASMYM
Sbjct: 619 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 678

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 679 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 719

[Close]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match: A0A5D3BYF2 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00980 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.2e-183
Identity = 322/341 (94.43%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFGYGASMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match: E5GCB7 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.6e-183
Identity = 321/341 (94.13%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 359 MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 418

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 419 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 478

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 479 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 539 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 598

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFG+GASMYM
Sbjct: 599 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMYM 658

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 659 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 699

[Close]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match: A0A1S3CHA1 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500720 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.6e-183
Identity = 321/341 (94.13%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 1   MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFG+GASMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMYM 300

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]
BLAST of CSPI07G22780 vs. NCBI nr
Match: XP_011659642.1 (protein gar2 [Cucumis sativus])

HSP 1 Score: 690.3 bits (1780), Expect = 8.5e-195
Identity = 335/337 (99.41%), Postives = 335/337 (99.41%), Query Frame = 0 

Query: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60
           MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG
Sbjct: 372 MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 431

Query: 61  KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120
           KLFVGGVAWETTEDTF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI
Sbjct: 432 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 491

Query: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180
           DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI
Sbjct: 492 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 551

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240
           MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ
Sbjct: 552 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 611

Query: 241 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 300
           TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY
Sbjct: 612 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 671

Query: 301 GMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           GMNGYG PSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 672 GMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 708

[Close]
BLAST of CSPI07G22780 vs. NCBI nr
Match: KGN45519.1 (hypothetical protein Csa_016070 [Cucumis sativus])

HSP 1 Score: 690.3 bits (1780), Expect = 8.5e-195
Identity = 335/337 (99.41%), Postives = 335/337 (99.41%), Query Frame = 0 

Query: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60
           MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120
           KLFVGGVAWETTEDTF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180
           DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240
           MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 300
           TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY
Sbjct: 241 TSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGRY 300

Query: 301 GMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           GMNGYG PSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 301 GMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]
BLAST of CSPI07G22780 vs. NCBI nr
Match: TYK03902.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 652.1 bits (1681), Expect = 2.6e-183
Identity = 322/341 (94.43%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFGYGASMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]
BLAST of CSPI07G22780 vs. NCBI nr
Match: KAA0059423.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 652.1 bits (1681), Expect = 2.6e-183
Identity = 322/341 (94.43%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFGYGASMYM
Sbjct: 619 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 678

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 679 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 719

[Close]
BLAST of CSPI07G22780 vs. NCBI nr
Match: ADN34116.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp. melo])

HSP 1 Score: 650.6 bits (1677), Expect = 7.5e-183
Identity = 321/341 (94.13%), Postives = 327/341 (95.89%), Query Frame = 0 

Query: 1   MAGERHYNPDFNAC---NGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSS 60
           MA ERHYNPDFN C   NG+N  Q  +QQ+QFDM NELEQANVDSTRSEIKNSTTQYDSS
Sbjct: 359 MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 418

Query: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120
           SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV
Sbjct: 419 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 478

Query: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 180
           LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTE EFKDYFSSFGRIIE
Sbjct: 479 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIFSGDRIHELGGKQVEIKKAVPK+VAYDFNSN
Sbjct: 539 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 598

Query: 241 SGQT-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYM 300
           SG T SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFG NYASFYGAYNYGFG+GASMYM
Sbjct: 599 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMYM 658

Query: 301 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 338
           NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY
Sbjct: 659 NGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 699

[Close]
BLAST of CSPI07G22780 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.8e-76
Identity = 166/332 (50.00%), Postives = 208/332 (62.65%), Query Frame = 0 

Query: 38  ANVDSTRSEIKNSTTQYDSSSS----GKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMI 97
           A VD+   ++K+S     SSSS    GKLFVGGV+WETT +TF++YF K+GE+ DSVIM 
Sbjct: 40  AAVDTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMT 99

Query: 98  DKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRADMND--KMVSRTKKI 157
           D+ TG PRGFGFVTF D A+A+ VL+ DH+ID R V++KRT+PR D +   K VS+T+KI
Sbjct: 100 DRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKI 159

Query: 158 FVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDR 217
           FVGG+PP L E+E K+YF  +G IIEHQIM D+ T RSRGFGF+TF+ EDSV+ +FS  +
Sbjct: 160 FVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGK 219

Query: 218 IHELGGKQVEIKKAVPKRVAYDFNSNSGQTSGYDMYRCGGLYDDIIGTDFGPYDLYAPYG 277
           +HELG KQVEIK+A PKR   D +  S   SG   Y     Y      D+  Y  Y  YG
Sbjct: 220 VHELGDKQVEIKRAEPKRTGRDNSFRSYGASG--KYDQEDSYSGKANEDYSMYSGYGGYG 279

Query: 278 GFG-------VNYASFY---GAYNYGFGYGASMYMNGRYGMNGYGAPSVGYGI------- 336
           G+G       VN A FY   G Y YG+GYG  M+  G YG  GY     GYG+       
Sbjct: 280 GYGAYAGNSMVNPAGFYGYGGGYGYGYGYGGQMFNMG-YGAGGYSHMGSGYGVAAAAAYG 339

[Close]
BLAST of CSPI07G22780 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-55
Identity = 136/345 (39.42%), Postives = 183/345 (53.04%), Query Frame = 0 

Query: 55  DSSSSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIA 114
           D +S GK+F+GG+  +TT   F+ +F KYGEI DSVIM D+HTG+PRGFGF+TF DP++ 
Sbjct: 14  DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query: 115 DMVLKIDHIIDGRAVEVKRTVPR-ADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFG 174
           D V++  H+I+G+ VE+KRT+P+ A  N     +TKKIFVGGIP  +TE+E KD+F+ +G
Sbjct: 74  DKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYG 133

Query: 175 RIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPK----R 234
            ++EHQ++ D++T RSRGFGF+ F++E+ V+ + S   + ++   QVEIKKA PK    R
Sbjct: 134 NVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSLNR 193

Query: 235 VAYDFNSNSGQTSGYDMYRC-GGLYDDIIG----------TDFGPYDLYAPYGGFGVNYA 294
               + S+    S  D Y   GG Y    G          +  GP   YA  GG+G    
Sbjct: 194 SPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYA--GGYGYGRG 253

Query: 295 S----FYGAYN------------------------YGFGYGASMY------------MNG 336
           S    F G YN                        YG G+G   Y              G
Sbjct: 254 SVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGG 313

[Close]
BLAST of CSPI07G22780 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-55
Identity = 134/292 (45.89%), Postives = 174/292 (59.59%), Query Frame = 0 

Query: 58  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 117
           S+GK+FVGG+A ETT   F  +F KYGEI DSVIM D+ TG+PRGFGFVT+ D ++ D V
Sbjct: 40  SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99

Query: 118 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIE 177
           ++ +HII G+ VE+KRT+PR  M+     +TKKIFVGGIP  + ++EFK++F  FG + E
Sbjct: 100 IQDNHIIIGKQVEIKRTIPRGSMSSNDF-KTKKIFVGGIPSSVDDDEFKEFFMQFGELKE 159

Query: 178 HQIMIDYKTKRSRGFGFITFENEDSVENIFS-GDRIHELGGKQVEIKKAVPKRVAYDFNS 237
           HQIM D+ T RSRGFGF+T+E+ED V+++ + G+RI EL G QVEIKKA PK+   +  +
Sbjct: 160 HQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRI-ELSGTQVEIKKAEPKKP--NSVT 219

Query: 238 NSGQTSGYDMYRCGGLYDDIIGTDF-----GPYDLYAPYGGFGVNYASFYGAYNYGF-GY 297
              +  G      GG Y D  G        GP   Y   GG+G   +  YG Y   F GY
Sbjct: 220 TPSKRFGDSRSNFGGGYGDGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYGGYGGEFGGY 279

Query: 298 GASMY--------------MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSM 329
           G   Y               +GRYG  G G    GY + G G GY G  G M
Sbjct: 280 GGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGG-GGGYGGGPGDM 326

[Close]
BLAST of CSPI07G22780 vs. TAIR 10
Match: AT5G55550.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-50
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 0 

Query: 57  SSSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADM 116
           S  GKLF+GG++W+T E+   DYFS YG++ ++VIM D+ TGR RGFGF+ F DP +++ 
Sbjct: 3   SDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSER 62

Query: 117 VLKIDHIIDGRAVEVKRTVPRADMN--------DKMVS-------RTKKIFVGGIPPGLT 176
           V+   HIIDGR VE K+ VPR D            ++S       RTKKIFVGG+P  +T
Sbjct: 63  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSIT 122

Query: 177 EEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVE 236
           EEEFK+YF  FG I +  +M D+ T+R RGFGFITF+++D+V+ +      HEL GK VE
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH-KTFHELNGKLVE 182

Query: 237 IKKAVPKRVAYDFNSNSGQTSG 244
           +K+AVPK ++   N  S   SG
Sbjct: 183 VKRAVPKEISPVSNIRSPLASG 203

[Close]
BLAST of CSPI07G22780 vs. TAIR 10
Match: AT5G55550.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-50
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 0 

Query: 57  SSSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADM 116
           S  GKLF+GG++W+T E+   DYFS YG++ ++VIM D+ TGR RGFGF+ F DP +++ 
Sbjct: 3   SDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSER 62

Query: 117 VLKIDHIIDGRAVEVKRTVPRADMN--------DKMVS-------RTKKIFVGGIPPGLT 176
           V+   HIIDGR VE K+ VPR D            ++S       RTKKIFVGG+P  +T
Sbjct: 63  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSIT 122

Query: 177 EEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVE 236
           EEEFK+YF  FG I +  +M D+ T+R RGFGFITF+++D+V+ +      HEL GK VE
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH-KTFHELNGKLVE 182

Query: 237 IKKAVPKRVAYDFNSNSGQTSG 244
           +K+AVPK ++   N  S   SG
Sbjct: 183 VKRAVPKEISPVSNIRSPLASG 203

The following BLAST results are available for this feature:
BLAST of CSPI07G22780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0343.6e-4738.30Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
O944322.1e-4237.20Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain... [more]
Q993834.6e-4238.96Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain... [more]
Q96DH61.1e-4040.86RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1[more]
Q920Q61.1e-4040.86RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1[more]
BLAST of CSPI07G22780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9M14.1e-19599.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1[more]
A0A5A7UU271.2e-18394.43Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BYF21.2e-18394.43Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469... [more]
E5GCB73.6e-18394.13Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675... [more]
A0A1S3CHA13.6e-18394.13heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucumis melo OX=3656 GN=... [more]
BLAST of CSPI07G22780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659642.18.5e-19599.41protein gar2 [Cucumis sativus][more]
KGN45519.18.5e-19599.41hypothetical protein Csa_016070 [Cucumis sativus][more]
TYK03902.12.6e-18394.43heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa][more]
KAA0059423.12.6e-18394.43heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa][more]
ADN34116.17.5e-18394.13heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp. melo][more]
BLAST of CSPI07G22780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G17640.13.8e-7650.00RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.21.7e-5539.42RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G40490.12.2e-5545.89RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G55550.11.2e-5048.02RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G55550.31.2e-5048.02RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 150..223
e-value: 5.6E-22
score: 89.0
coord: 61..132
e-value: 8.0E-22
score: 88.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 62..119
e-value: 1.8E-13
score: 50.1
coord: 151..208
e-value: 2.9E-17
score: 62.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 60..136
score: 15.783806
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 149..227
score: 18.495615
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 143..255
e-value: 1.9E-23
score: 85.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 17..142
e-value: 1.3E-24
score: 88.7
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 26..327
NoneNo IPR availablePANTHERPTHR48033:SF10RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 26..327
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 143..248
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 52..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G22780.1CSPI07G22780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding