CSPI07G22610 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G22610
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr7: 19131511 .. 19132212 (+)
RNA-Seq Expression	CSPI07G22610
Synteny	CSPI07G22610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA

mRNA sequence

ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA

Coding sequence (CDS)

ATGACTCAGTTCTCATGTCGTTTTATGAAGATGATTAATACCTGGAAGGCTGGAACAATTGCCAAATTTGTAAATTCGTCCATAAGATTTGCCGTTCATTGTTTTCGTACAGCTGCAGCATCTTTATACAATTGCTATGGTTCAGCACGACACTTAAGGGCTCCGAATTTGCTGAATATTGCATTCAATTTTACTTCCTTACCATTCCGTATGTCTGTTCTCTTCATCTGCTCCGGCATTGCCATCATTTGCTCGCTGTCTATAGCCGTCTTGTTCTTCAACCTTACGATGATACTGGGATGGTTTAATTGCTGTTGCCGTTCGCCTGAGATGACTAACGTTAAGAATATTAAATATGAAGACTCAAATCTTATGAAGATCTCAACTATCATGTACAAGAAAGAAAACAAGAGTGAAGAAACTAATATTACAAGTGAATGTGCTTTGTGCTTGTCACCTTATGAAGATGAGGAATGCATACGGGAGCTTCTTGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTATTCACATTCGAACTGCCCGCTCTGCCGGACTCCACTTGGCCGTGTAGCTTGTATTAATGGGGAGTTGACATCAGGGGTGGTAGTCGCCATTAGCAACAGTCTCCAGATTGAGACTTCTACTCATGGAAGTCAGAGGGAGGCGTCACCTGAAAACATGGTTTAA

Protein sequence

MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV*

Homology

[Close]

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT
Sbjct: 122 VFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181

Query: 191 PLGRVAC 198
              RV+C
Sbjct: 182 ---RVSC 185

[Close]

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 120 EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWL 179
           ++S +  I+   Y+K +   E   +S+C++CLS +++ E +R L  CNH FH  CID WL
Sbjct: 135 DESLIKSITVYKYRKMDGFVE---SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 194

Query: 180 YSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL 215
            SHSNCPLCR  +   + +   +LT+  +V  +NS+
Sbjct: 195 KSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSI 227

[Close]

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 132 YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTP 191
           Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ 
Sbjct: 109 YSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN 168

Query: 192 LGRVACINGELTSGVVVA 210
           L   +   G+   GV +A
Sbjct: 169 LTAKSNKPGDEDDGVPLA 186

[Close]

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 145 SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGE 204
           S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQ 199

Query: 205 LTSGVVVAISNS 214
             S VV   SNS
Sbjct: 200 NVSVVVANQSNS 211

[Close]

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 99  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEE 158
           LG F+    SP  T  ++ K  DS+++    +   +EN+ EE     EC +CL  +E  +
Sbjct: 91  LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDE-EEECVICLGLWEAGD 150

Query: 159 CIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIET 218
             R+L  C H FH  CID+WL SHS CPLCR+P              V+ A+S+   ++ 
Sbjct: 151 FGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP--------------VLAAVSDEENLKL 204

Query: 219 STHGSQREA 228
           + +  + EA
Sbjct: 211 AVNAVEEEA 204

[Close]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL
Match: A0A5D3BXP3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001170 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.6e-91
Identity = 182/237 (76.79%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNI 60
           M QF CRFMK I+TW+AG IAKFVN+S R AVHCF TAAASL NCY SA+HLRAPNL   
Sbjct: 1   MPQFLCRFMK-IDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQ-- 60

Query: 61  AFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYE 120
             +   LP  MSVLFICSG+AI+CSL IA+LFFNL M LGWFNCCCRSPEMT+VKNIKYE
Sbjct: 61  ILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYE 120

Query: 121 DSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLY 180
           DSNL+KISTIMYKKENKSEETNI SECALCLSP ED ECIR+LLACNHVFHASCIDVWLY
Sbjct: 121 DSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLY 180

Query: 181 SHSNCPLCRTPLGRVACINGELTSGV----VVAISNSLQIETSTHGSQREASPENMV 234
           SHSNCPLCRT L  VAC NGELTSGV    VV I+NSLQI  S H S+R +  ENMV
Sbjct: 181 SHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV 233

[Close]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL
Match: A0A0A0KAX6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G450560 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.4e-86
Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 130
           MSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI
Sbjct: 1   MSVLFICSGIAIICSLSIALLFFNLTMILGWFNCCCRSPEMTNVKNIKYEDSNLMKISTI 60

Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           MYKKENKSEETNITSECALCLSPYED ECIRELLACNHVFHASCID+WLYSHSNCPLCRT
Sbjct: 61  MYKKENKSEETNITSECALCLSPYEDGECIRELLACNHVFHASCIDIWLYSHSNCPLCRT 120

Query: 191 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 234
           PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV
Sbjct: 121 PLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 163

[Close]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL
Match: A0A2N9J1M7 (RING-type E3 ubiquitin transferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58113 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-19
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 79  GIAIICSLSIAVLFFNLTM-ILGWFNCCCRSPEMTN-VKNIKYEDSNL--MKISTIMYKK 138
           GI +I S+ IA++F+NL M +L  +      P     VK   ++ S L  + ++T  YKK
Sbjct: 7   GIVVIGSMIIALVFYNLVMFVLRAYKHLLHPPTTIGPVKEKGFDSSRLNPLSVTTFKYKK 66

Query: 139 ENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGR 198
             ++ E    +EC +CLS +ED+EC+  L  C H FH  CID+WLYSHS+CPLCRTP+ R
Sbjct: 67  GAENIEAASETECVVCLSSFEDDECVSRLPQCKHSFHTPCIDMWLYSHSDCPLCRTPIDR 126

Query: 199 VACING-----ELTSGVVVAIS 212
           ++  NG     E T  V+V IS
Sbjct: 127 LSTQNGAKDSKENTQDVMVTIS 148

[Close]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL
Match: A0A2Z6MV30 (RING-type E3 ubiquitin transferase OS=Trifolium subterraneum OX=3900 GN=TSUD_357780 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16
Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 74  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS---- 133
           +++  GI II S+ IA +FF LTM  GW N     P + T + +   + S  M +     
Sbjct: 10  MYVLPGIIIIGSIVIAFIFFRLTM-QGWCNLINHEPTLPTTIISYDEKFSGCMSLESHSI 69

Query: 134 TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLC 193
           T MYK+ + +++    +EC +CL+ ++++E +R+L +C HVFH SCID WL SHS CPLC
Sbjct: 70  TFMYKEGDAAQQDINQTECVICLTVFQEDESVRKLHSCKHVFHTSCIDKWLGSHSGCPLC 129

Query: 194 RTPLGRVACINGELTSG-VVVAISNS 214
           R+ + +V   N  L +  ++VAI +S
Sbjct: 130 RSRIDQVTSPNESLANDHMIVAIVDS 154

[Close]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL
Match: A0A2K3N066 (RING-type E3 ubiquitin transferase OS=Trifolium pratense OX=57577 GN=L195_g019557 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.1e-16
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 74  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS---- 133
           +++  GI II S+ IA + F LTM  GW +     P + T V +   + S  M +     
Sbjct: 10  MYVLPGIIIIGSIVIAFIIFRLTM-QGWCDLIDHEPTLPTTVISYDEKFSACMSLESHSI 69

Query: 134 TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLC 193
           T MYK+ + +E+    +EC +CLS ++++E +R+L +C HVFH SCID WL SHS CPLC
Sbjct: 70  TFMYKEGDAAEQGINQTECVICLSVFQEDESVRKLHSCKHVFHTSCIDKWLGSHSGCPLC 129

Query: 194 RTPLGRVACINGELTSG-VVVAISNS 214
           R+ + +V   N  L +   +VAI +S
Sbjct: 130 RSKIDQVTSPNESLANDHTIVAIVDS 154

[Close]

BLAST of CSPI07G22610 vs. NCBI nr
Match: KAE8646506.1 (hypothetical protein Csa_015876 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 8.8e-98
Identity = 180/184 (97.83%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 50   RHLRAPNLLNIAFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSP 109
            RHLRAPNLLNIAFNFTS PFRMSVLFICSGIAIICSLSIA+LFFNLTMILGWFNCCCRSP
Sbjct: 893  RHLRAPNLLNIAFNFTSFPFRMSVLFICSGIAIICSLSIALLFFNLTMILGWFNCCCRSP 952

Query: 110  EMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHV 169
            EMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYED ECIRELLACNHV
Sbjct: 953  EMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDGECIRELLACNHV 1012

Query: 170  FHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASP 229
            FHASCID+WLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASP
Sbjct: 1013 FHASCIDIWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASP 1072

Query: 230  ENMV 234
            ENMV
Sbjct: 1073 ENMV 1076

[Close]

BLAST of CSPI07G22610 vs. NCBI nr
Match: KAA0059407.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK03920.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-90
Identity = 182/237 (76.79%), Postives = 196/237 (82.70%), Query Frame = 0


Query: 1   MTQFSCRFMKMINTWKAGTIAKFVNSSIRFAVHCFRTAAASLYNCYGSARHLRAPNLLNI 60
           M QF CRFMK I+TW+AG IAKFVN+S R AVHCF TAAASL NCY SA+HLRAPNL   
Sbjct: 1   MPQFLCRFMK-IDTWRAGAIAKFVNASKRSAVHCFSTAAASLSNCYCSAQHLRAPNLQ-- 60

Query: 61  AFNFTSLPFRMSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMTNVKNIKYE 120
             +   LP  MSVLFICSG+AI+CSL IA+LFFNL M LGWFNCCCRSPEMT+VKNIKYE
Sbjct: 61  ILHSILLPCTMSVLFICSGVAIVCSLFIALLFFNLAM-LGWFNCCCRSPEMTDVKNIKYE 120

Query: 121 DSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLY 180
           DSNL+KISTIMYKKENKSEETNI SECALCLSP ED ECIR+LLACNHVFHASCIDVWLY
Sbjct: 121 DSNLIKISTIMYKKENKSEETNIPSECALCLSPCEDGECIRKLLACNHVFHASCIDVWLY 180

Query: 181 SHSNCPLCRTPLGRVACINGELTSGV----VVAISNSLQIETSTHGSQREASPENMV 234
           SHSNCPLCRT L  VAC NGELTSGV    VV I+NSLQI  S H S+R +  ENMV
Sbjct: 181 SHSNCPLCRTTLDHVACNNGELTSGVVNSHVVVINNSLQIGLSLHESRRGSPSENMV 233

[Close]

BLAST of CSPI07G22610 vs. NCBI nr
Match: KAG7013994.1 (E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 4.0e-50
Identity = 110/164 (67.07%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 71  MSVLFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEMT-NVKNIKYEDSNLMKIST 130
           MSV FICSGIAIICSL I++ FF+LT ILGWFNCCC SP  T +V+NIK E S++M+I T
Sbjct: 1   MSVFFICSGIAIICSLIISLTFFHLT-ILGWFNCCCHSPRTTESVENIKNEVSHIMQIPT 60

Query: 131 IMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR 190
           + YKKEN++EETN  SEC LCLSP+ED ECIR+L +CNHVFHASCIDVWL SHS CPLCR
Sbjct: 61  VTYKKENENEETNTESECVLCLSPFEDGECIRQLPSCNHVFHASCIDVWLSSHSECPLCR 120

Query: 191 TPLGRVACINGELTSGVVVAISNSLQIETSTHGSQREASPENMV 234
           TP+  VAC   E     VV I NSLQIE S H  + +A PENMV
Sbjct: 121 TPVHHVACRTAEAVICQVVDI-NSLQIELSPHVIRSKAWPENMV 162

[Close]

BLAST of CSPI07G22610 vs. NCBI nr
Match: GAU28792.1 (hypothetical protein TSUD_357780 [Trifolium subterraneum])

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-16
Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 74  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS---- 133
           +++  GI II S+ IA +FF LTM  GW N     P + T + +   + S  M +     
Sbjct: 10  MYVLPGIIIIGSIVIAFIFFRLTM-QGWCNLINHEPTLPTTIISYDEKFSGCMSLESHSI 69

Query: 134 TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLC 193
           T MYK+ + +++    +EC +CL+ ++++E +R+L +C HVFH SCID WL SHS CPLC
Sbjct: 70  TFMYKEGDAAQQDINQTECVICLTVFQEDESVRKLHSCKHVFHTSCIDKWLGSHSGCPLC 129

Query: 194 RTPLGRVACINGELTSG-VVVAISNS 214
           R+ + +V   N  L +  ++VAI +S
Sbjct: 130 RSRIDQVTSPNESLANDHMIVAIVDS 154

[Close]

BLAST of CSPI07G22610 vs. NCBI nr
Match: PNX96352.1 (RING-H2 finger protein ATL52-like [Trifolium pratense] >PNX96438.1 RING-H2 finger protein ATL52-like [Trifolium pratense] >PNY02945.1 RING-H2 finger protein ATL52-like [Trifolium pratense])

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-15
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 74  LFICSGIAIICSLSIAVLFFNLTMILGWFNCCCRSPEM-TNVKNIKYEDSNLMKIS---- 133
           +++  GI II S+ IA + F LTM  GW +     P + T V +   + S  M +     
Sbjct: 10  MYVLPGIIIIGSIVIAFIIFRLTM-QGWCDLIDHEPTLPTTVISYDEKFSACMSLESHSI 69

Query: 134 TIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLC 193
           T MYK+ + +E+    +EC +CLS ++++E +R+L +C HVFH SCID WL SHS CPLC
Sbjct: 70  TFMYKEGDAAEQGINQTECVICLSVFQEDESVRKLHSCKHVFHTSCIDKWLGSHSGCPLC 129

Query: 194 RTPLGRVACINGELTSG-VVVAISNS 214
           R+ + +V   N  L +   +VAI +S
Sbjct: 130 RSKIDQVTSPNESLANDHTIVAIVDS 154

[Close]

BLAST of CSPI07G22610 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 8.4e-14
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 131 MYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRT 190
           ++  E + EE   + EC++CLS ++DEE +R +  C+H+FH  CIDVWL +++NCPLCRT
Sbjct: 122 VFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181

Query: 191 PLGRVAC 198
              RV+C
Sbjct: 182 ---RVSC 185

[Close]

BLAST of CSPI07G22610 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 120 EDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWL 179
           ++S +  I+   Y+K +   E   +S+C++CLS +++ E +R L  CNH FH  CID WL
Sbjct: 135 DESLIKSITVYKYRKMDGFVE---SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWL 194

Query: 180 YSHSNCPLCRTPLGRVACIN-GELTSGVVVAISNSL 215
            SHSNCPLCR  +   + +   +LT+  +V  +NS+
Sbjct: 195 KSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSI 227

[Close]

BLAST of CSPI07G22610 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 132 YKKENKSEETNITSECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCRTP 191
           Y    +S+  +   ECA+CL+  ED E +R L  CNH+FH  CID WLYSH+ CP+CR+ 
Sbjct: 109 YSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN 168

Query: 192 LGRVACINGELTSGVVVA 210
           L   +   G+   GV +A
Sbjct: 169 LTAKSNKPGDEDDGVPLA 186

[Close]

BLAST of CSPI07G22610 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 145 SECALCLSPYEDEECIRELLACNHVFHASCIDVWLYSHSNCPLCR---TPLGRVACINGE 204
           S+C++CLS +E+ E +R L  CNH FH  CID WL SHSNCPLCR   T +       G+
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQ 199

Query: 205 LTSGVVVAISNS 214
             S VV   SNS
Sbjct: 200 NVSVVVANQSNS 211

[Close]

BLAST of CSPI07G22610 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-13
Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 99  LGWFNCCCRSPEMTNVKNIKYEDSNLMKISTIMYKKENKSEETNITSECALCLSPYEDEE 158
           LG F+    SP  T  ++ K  DS+++    +   +EN+ EE     EC +CL  +E  +
Sbjct: 91  LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDE-EEECVICLGLWEAGD 150

Query: 159 CIRELLACNHVFHASCIDVWLYSHSNCPLCRTPLGRVACINGELTSGVVVAISNSLQIET 218
             R+L  C H FH  CID+WL SHS CPLCR+P              V+ A+S+   ++ 
Sbjct: 151 FGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP--------------VLAAVSDEENLKL 204

Query: 219 STHGSQREA 228
           + +  + EA
Sbjct: 211 AVNAVEEEA 204

The following BLAST results are available for this feature:

BLAST of CSPI07G22610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	1.2e-12	47.76	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9SRQ8	2.6e-12	38.54	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q8W571	3.4e-12	43.59	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
Q9LF64	3.4e-12	50.00	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LUZ9	4.5e-12	33.33	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of CSPI07G22610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXP3	8.6e-91	76.79	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0KAX6	6.4e-86	98.16	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G450560 PE...	[more]
A0A2N9J1M7	3.0e-19	42.25	RING-type E3 ubiquitin transferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58113...	[more]
A0A2Z6MV30	1.4e-16	38.36	RING-type E3 ubiquitin transferase OS=Trifolium subterraneum OX=3900 GN=TSUD_357...	[more]
A0A2K3N066	9.1e-16	39.04	RING-type E3 ubiquitin transferase OS=Trifolium pratense OX=57577 GN=L195_g01955...	[more]

BLAST of CSPI07G22610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646506.1	8.8e-98	97.83	hypothetical protein Csa_015876 [Cucumis sativus]	[more]
KAA0059407.1	1.8e-90	76.79	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK03920.1 E3...	[more]
KAG7013994.1	4.0e-50	67.07	E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyros...	[more]
GAU28792.1	2.9e-16	38.36	hypothetical protein TSUD_357780 [Trifolium subterraneum]	[more]
PNX96352.1	1.9e-15	39.04	RING-H2 finger protein ATL52-like [Trifolium pratense] >PNX96438.1 RING-H2 finge...	[more]

BLAST of CSPI07G22610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	8.4e-14	47.76	RING/U-box superfamily protein	[more]
AT3G03550.1	1.9e-13	38.54	RING/U-box superfamily protein	[more]
AT4G40070.1	2.4e-13	43.59	RING/U-box superfamily protein	[more]
AT5G17600.1	2.4e-13	50.00	RING/U-box superfamily protein	[more]
AT5G58580.1	3.2e-13	33.33	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 147..188 e-value: 1.7E-4 score: 30.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 146..189 e-value: 8.4E-13 score: 48.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 147..189 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..196 e-value: 4.3E-19 score: 69.5
None	No IPR available	PANTHER	PTHR45676:SF84	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 76..195
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 146..189 e-value: 7.60463E-15 score: 64.6387
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 131..194
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 76..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G22610.1	CSPI07G22610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane