CSPI07G22410 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G22410
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr7: 19014767 .. 19015108 (-)
RNA-Seq Expression	CSPI07G22410
Synteny	CSPI07G22410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCTCTTACTAGTTGGCAGTATCGCAAAAAGGCGACGTGAGCTTATACGATCCACAGTCGTTTTTGTCGAGTTTTTATGTTTTTGGTCCCTTTACGACGTCGCATTTGCATTTATTTCCGTAGCCATCTCTTTGTCAAGCCGAATCCTTTTCTCCGGGTTGCAATCACGTGGACTTGTTACAACGATGGTCCTACGATTCCCTCCCCATCCGACGCCCCATGCTGAAGAAACTTCTAAACTCTCGGTCATACCATCCACTGGTGGACCGCCAGAATGGGACCGCCATGGTCCTTCTTCTACACGATTGCCAACGCTAATCTGCACCATTGCCAATTAG

mRNA sequence

ATGTGGCTCTTACTAGTTGGCAGTATCGCAAAAAGGCGACGTGAGCTTATACGATCCACAGTCGTTTTTGTCGAGTTTTTATGTTTTTGGTCCCTTTACGACGTCGCATTTGCATTTATTTCCGTAGCCATCTCTTTGTCAAGCCGAATCCTTTTCTCCGGGTTGCAATCACGTGGACTTGTTACAACGATGGTCCTACGATTCCCTCCCCATCCGACGCCCCATGCTGAAGAAACTTCTAAACTCTCGGTCATACCATCCACTGGTGGACCGCCAGAATGGGACCGCCATGGTCCTTCTTCTACACGATTGCCAACGCTAATCTGCACCATTGCCAATTAG

Coding sequence (CDS)

ATGTGGCTCTTACTAGTTGGCAGTATCGCAAAAAGGCGACGTGAGCTTATACGATCCACAGTCGTTTTTGTCGAGTTTTTATGTTTTTGGTCCCTTTACGACGTCGCATTTGCATTTATTTCCGTAGCCATCTCTTTGTCAAGCCGAATCCTTTTCTCCGGGTTGCAATCACGTGGACTTGTTACAACGATGGTCCTACGATTCCCTCCCCATCCGACGCCCCATGCTGAAGAAACTTCTAAACTCTCGGTCATACCATCCACTGGTGGACCGCCAGAATGGGACCGCCATGGTCCTTCTTCTACACGATTGCCAACGCTAATCTGCACCATTGCCAATTAG

Protein sequence

MWLLLVGSIAKRRRELIRSTVVFVEFLCFWSLYDVAFAFISVAISLSSRILFSGLQSRGLVTTMVLRFPPHPTPHAEETSKLSVIPSTGGPPEWDRHGPSSTRLPTLICTIAN*

Homology

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BLAST of CSPI07G22410 vs. ExPASy TrEMBL
Match: A0A0A0KCG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448870 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MWLLLVGSIAKRRRELIRSTVVFVEFLCFWSLYDVAFAFISVAISLSSRILFSGLQSRGL 60
           MWLLLVGSIAKRRRELIRSTVVFVEFLCFWSLYDVAFAFISVAISLSSRILFSGLQSRGL
Sbjct: 1   MWLLLVGSIAKRRRELIRSTVVFVEFLCFWSLYDVAFAFISVAISLSSRILFSGLQSRGL 60

Query: 61  VTTMVLRFPPHPTPHAEETSKLSVIPSTGGPPEWDRHGPSSTRLPTLICTIAN 114
           VTTMVLRFPPHPTPHAEETSKLSVIPSTGGPPEWDRHGPSSTRLPTLICTIAN
Sbjct: 61  VTTMVLRFPPHPTPHAEETSKLSVIPSTGGPPEWDRHGPSSTRLPTLICTIAN 113

The following BLAST results are available for this feature:

BLAST of CSPI07G22410 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G22410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCG7	4.4e-56	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448870 PE=4 SV=1	[more]

BLAST of CSPI07G22410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of CSPI07G22410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G22410.1	CSPI07G22410.1	mRNA